RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 EIF3CLB5ME19 914 aaKnown RBP16.65■□□□□ 0.26
SMPD4-207ENST00000435455 SNAP91O60641 907 aa16.65■□□□□ 0.26
SMPD4-207ENST00000435455 ADH1BP00325 375 aa16.65■□□□□ 0.26
SMPD4-207ENST00000435455 EIF4A3P38919 411 aaKnown RBP16.65■□□□□ 0.26
SMPD4-207ENST00000435455 ACAP1Q15027 740 aa16.65■□□□□ 0.26
SMPD4-207ENST00000435455 DLG2Q15700 870 aa16.65■□□□□ 0.26
SMPD4-207ENST00000435455 CST6Q15828 149 aa16.65■□□□□ 0.26
SMPD4-207ENST00000435455 CCDC122Q5T0U0 273 aa16.65■□□□□ 0.26
SMPD4-207ENST00000435455 RETSATQ6NUM9 610 aa16.65■□□□□ 0.26
SMPD4-207ENST00000435455 USP30Q70CQ3 517 aa16.65■□□□□ 0.26
SMPD4-207ENST00000435455 SLC41A1Q8IVJ1 513 aa16.65■□□□□ 0.26
SMPD4-207ENST00000435455 PYROXD2Q8N2H3 581 aa16.65■□□□□ 0.26
SMPD4-207ENST00000435455 STK40Q8N2I9 435 aa16.65■□□□□ 0.26
SMPD4-207ENST00000435455 OR7D4Q8NG98 312 aa16.65■□□□□ 0.26
SMPD4-207ENST00000435455 CCDC114Q96M63 670 aa16.65■□□□□ 0.26
SMPD4-207ENST00000435455 FAM129BQ96TA1 746 aa16.65■□□□□ 0.26
SMPD4-207ENST00000435455 EIF3CQ99613 913 aaKnown RBP16.65■□□□□ 0.26
SMPD4-207ENST00000435455 SPON2Q9BUD6 331 aa16.65■□□□□ 0.26
SMPD4-207ENST00000435455 GPR174Q9BXC1 333 aa16.65■□□□□ 0.26
SMPD4-207ENST00000435455 MAGEB5Q9BZ81 275 aa16.65■□□□□ 0.26
SMPD4-207ENST00000435455 TRIM7Q9C029 511 aa16.65■□□□□ 0.26
SMPD4-207ENST00000435455 TRIM5Q9C035 493 aa16.65■□□□□ 0.26
SMPD4-207ENST00000435455 MAGEH1Q9H213 219 aa16.65■□□□□ 0.26
SMPD4-207ENST00000435455 PABPC3Q9H361 631 aaKnown RBP16.65■□□□□ 0.26
SMPD4-207ENST00000435455 SMOC1Q9H4F8 434 aa16.65■□□□□ 0.26
SMPD4-207ENST00000435455 ATP13A1Q9HD20 1204 aa16.65■□□□□ 0.26
SMPD4-207ENST00000435455 EVLQ9UI08 416 aaPredicted RBP16.65■□□□□ 0.26
SMPD4-207ENST00000435455 NEU3Q9UQ49 428 aa16.65■□□□□ 0.26
SMPD4-207ENST00000435455 FARP1Q9Y4F1 1045 aaPredicted RBP16.65■□□□□ 0.26
SMPD4-207ENST00000435455 CXorf51AA0A1B0GTR3 108 aa16.64■□□□□ 0.25
SMPD4-207ENST00000435455 KHNYNO15037 678 aaKnown RBP16.64■□□□□ 0.25
SMPD4-207ENST00000435455 ALOX15BO15296 676 aa16.64■□□□□ 0.25
SMPD4-207ENST00000435455 PRPSAP2O60256 369 aa16.64■□□□□ 0.25
SMPD4-207ENST00000435455 MFAP3LO75121 409 aa16.64■□□□□ 0.25
SMPD4-207ENST00000435455 SRCP12931 536 aa16.64■□□□□ 0.25
SMPD4-207ENST00000435455 ITPKAP23677 461 aa16.64■□□□□ 0.25
SMPD4-207ENST00000435455 EPHB2P29323 1055 aa16.64■□□□□ 0.25
SMPD4-207ENST00000435455 ID4P47928 161 aa16.64■□□□□ 0.25
SMPD4-207ENST00000435455 CLCN6P51797 869 aa16.64■□□□□ 0.25
SMPD4-207ENST00000435455 SLC20A2Q08357 652 aa16.64■□□□□ 0.25
SMPD4-207ENST00000435455 ZNF252P-AS1Q0IIN9 211 aa16.64■□□□□ 0.25
SMPD4-207ENST00000435455 SEMA3BQ13214 749 aa16.64■□□□□ 0.25
SMPD4-207ENST00000435455 WDR45BQ5MNZ6 344 aa16.64■□□□□ 0.25
SMPD4-207ENST00000435455 ERMARDQ5T6L9 678 aa16.64■□□□□ 0.25
SMPD4-207ENST00000435455 PEAR1Q5VY43 1037 aaPredicted RBP16.64■□□□□ 0.25
SMPD4-207ENST00000435455 FAM124AQ86V42 546 aa16.64■□□□□ 0.25
SMPD4-207ENST00000435455 MMAAQ8IVH4 418 aaKnown RBP16.64■□□□□ 0.25
SMPD4-207ENST00000435455 DEFB119Q8N690 84 aa16.64■□□□□ 0.25
SMPD4-207ENST00000435455 ATP11CQ8NB49 1132 aa16.64■□□□□ 0.25
SMPD4-207ENST00000435455 CEP76Q8TAP6 659 aa16.64■□□□□ 0.25
SMPD4-207ENST00000435455 NETO1Q8TDF5 533 aa16.64■□□□□ 0.25
SMPD4-207ENST00000435455 GANCQ8TET4 914 aa16.64■□□□□ 0.25
SMPD4-207ENST00000435455 OR8D1Q8WZ84 308 aa16.64■□□□□ 0.25
SMPD4-207ENST00000435455 BTBD1Q9H0C5 482 aa16.64■□□□□ 0.25
SMPD4-207ENST00000435455 THAP2Q9H0W7 228 aa16.64■□□□□ 0.25
SMPD4-207ENST00000435455 DEF6Q9H4E7 631 aa16.64■□□□□ 0.25
SMPD4-207ENST00000435455 CATSPERBQ9H7T0 1116 aa16.64■□□□□ 0.25
SMPD4-207ENST00000435455 SGK2Q9HBY8 427 aa16.64■□□□□ 0.25
SMPD4-207ENST00000435455 DONSONQ9NYP3 566 aa16.64■□□□□ 0.25
SMPD4-207ENST00000435455 PILRBQ9UKJ0 227 aa16.64■□□□□ 0.25
SMPD4-207ENST00000435455 CDV3Q9UKY7 258 aaKnown RBP16.64■□□□□ 0.25
SMPD4-207ENST00000435455 AP4E1Q9UPM8 1137 aa16.64■□□□□ 0.25
SMPD4-207ENST00000435455 CACNA1EQ15878 2313 aa16.63■□□□□ 0.25
SMPD4-207ENST00000435455 SSU72P8A0A1W2PR75 194 aa16.63■□□□□ 0.25
SMPD4-207ENST00000435455 MEI4A8MW99 385 aa16.63■□□□□ 0.25
SMPD4-207ENST00000435455 CBX4O00257 560 aa16.63■□□□□ 0.25
SMPD4-207ENST00000435455 MID1O15344 667 aa16.63■□□□□ 0.25
SMPD4-207ENST00000435455 FGF10O15520 208 aaPredicted RBP16.63■□□□□ 0.25
SMPD4-207ENST00000435455 CREB3O43889 395 aa16.63■□□□□ 0.25
SMPD4-207ENST00000435455 RAMP2O60895 175 aa16.63■□□□□ 0.25
SMPD4-207ENST00000435455 MT-CO1P00395 513 aa16.63■□□□□ 0.25
SMPD4-207ENST00000435455 CYP1A2P05177 515 aa16.63■□□□□ 0.25
SMPD4-207ENST00000435455 VAV1P15498 845 aa16.63■□□□□ 0.25
SMPD4-207ENST00000435455 SLC8A1P32418 973 aa16.63■□□□□ 0.25
SMPD4-207ENST00000435455 PCK1P35558 622 aa16.63■□□□□ 0.25
SMPD4-207ENST00000435455 GEMIN4P57678 1058 aaKnown RBP16.63■□□□□ 0.25
SMPD4-207ENST00000435455 MAPK8IP2Q13387 824 aaPredicted RBP16.63■□□□□ 0.25
SMPD4-207ENST00000435455 SLC18A3Q16572 532 aa16.63■□□□□ 0.25
SMPD4-207ENST00000435455 RSPO4Q2I0M5 234 aaPredicted RBP16.63■□□□□ 0.25
SMPD4-207ENST00000435455 IL31Q6EBC2 164 aa16.63■□□□□ 0.25
SMPD4-207ENST00000435455 Q6ZVU0 165 aa16.63■□□□□ 0.25
SMPD4-207ENST00000435455 PSTKQ8IV42 348 aaKnown RBP16.63■□□□□ 0.25
SMPD4-207ENST00000435455 CNGA4Q8IV77 575 aa16.63■□□□□ 0.25
SMPD4-207ENST00000435455 RGL4Q8IZJ4 473 aa16.63■□□□□ 0.25
SMPD4-207ENST00000435455 RTL3Q8N8U3 475 aaKnown RBP16.63■□□□□ 0.25
SMPD4-207ENST00000435455 NUSAP1Q9BXS6 441 aaKnown RBP16.63■□□□□ 0.25
SMPD4-207ENST00000435455 ACE2Q9BYF1 805 aaPredicted RBP16.63■□□□□ 0.25
SMPD4-207ENST00000435455 ABHD10Q9NUJ1 306 aa16.63■□□□□ 0.25
SMPD4-207ENST00000435455 NDFIP2Q9NV92 336 aa16.63■□□□□ 0.25
SMPD4-207ENST00000435455 FBXL12Q9NXK8 326 aa16.63■□□□□ 0.25
SMPD4-207ENST00000435455 SUSD2Q9UGT4 822 aa16.63■□□□□ 0.25
SMPD4-207ENST00000435455 PCSK1NQ9UHG2 260 aa16.63■□□□□ 0.25
SMPD4-207ENST00000435455 DNAI1Q9UI46 699 aa16.63■□□□□ 0.25
SMPD4-207ENST00000435455 HPCAL4Q9UM19 191 aa16.63■□□□□ 0.25
SMPD4-207ENST00000435455 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.62■□□□□ 0.25
SMPD4-207ENST00000435455 WASH4PA8MWX3 477 aa16.62■□□□□ 0.25
SMPD4-207ENST00000435455 MCF2LO15068 1137 aa16.62■□□□□ 0.25
SMPD4-207ENST00000435455 LRCH4O75427 683 aa16.62■□□□□ 0.25
SMPD4-207ENST00000435455 ZMPSTE24O75844 475 aa16.62■□□□□ 0.25
SMPD4-207ENST00000435455 SEMA4FO95754 770 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms