RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 FAM149AA5PLN7 773 aa17.75■□□□□ 0.43
PTCD1-202ENST00000419981 TLR4O00206 839 aa17.75■□□□□ 0.43
PTCD1-202ENST00000419981 ENC1O14682 589 aa17.75■□□□□ 0.43
PTCD1-202ENST00000419981 MCF2LO15068 1137 aa17.75■□□□□ 0.43
PTCD1-202ENST00000419981 BNIP3LO60238 219 aa17.75■□□□□ 0.43
PTCD1-202ENST00000419981 LDOC1O95751 146 aaPredicted RBP17.75■□□□□ 0.43
PTCD1-202ENST00000419981 PRKCSHP14314 528 aaPredicted RBP17.75■□□□□ 0.43
PTCD1-202ENST00000419981 EPHA8P29322 1005 aaPredicted RBP17.75■□□□□ 0.43
PTCD1-202ENST00000419981 MAT2AP31153 395 aaKnown RBP17.75■□□□□ 0.43
PTCD1-202ENST00000419981 NUDT1P36639 197 aa17.75■□□□□ 0.43
PTCD1-202ENST00000419981 SULT1E1P49888 294 aa17.75■□□□□ 0.43
PTCD1-202ENST00000419981 BPIFB4P59827 614 aa17.75■□□□□ 0.43
PTCD1-202ENST00000419981 CNTN1Q12860 1018 aa17.75■□□□□ 0.43
PTCD1-202ENST00000419981 POM121L1PQ3SYA9 428 aa17.75■□□□□ 0.43
PTCD1-202ENST00000419981 BRMS1LQ5PSV4 323 aa17.75■□□□□ 0.43
PTCD1-202ENST00000419981 AGBL4Q5VU57 503 aa17.75■□□□□ 0.43
PTCD1-202ENST00000419981 OTUD1Q5VV17 481 aaPredicted RBP17.75■□□□□ 0.43
PTCD1-202ENST00000419981 C14orf80Q86SX3 495 aa17.75■□□□□ 0.43
PTCD1-202ENST00000419981 TRIM69Q86WT6 500 aa17.75■□□□□ 0.43
PTCD1-202ENST00000419981 FAM71AQ8IYT1 594 aa17.75■□□□□ 0.43
PTCD1-202ENST00000419981 MFSD2AQ8NA29 543 aa17.75■□□□□ 0.43
PTCD1-202ENST00000419981 SAP25Q8TEE9 199 aa17.75■□□□□ 0.43
PTCD1-202ENST00000419981 CNDP2Q96KP4 475 aaKnown RBP17.75■□□□□ 0.43
PTCD1-202ENST00000419981 NPY6RQ99463 290 aa17.75■□□□□ 0.43
PTCD1-202ENST00000419981 TKTL2Q9H0I9 626 aa17.75■□□□□ 0.43
PTCD1-202ENST00000419981 PDCL3Q9H2J4 239 aa17.75■□□□□ 0.43
PTCD1-202ENST00000419981 NDST4Q9H3R1 872 aa17.75■□□□□ 0.43
PTCD1-202ENST00000419981 WDCPQ9H6R7 721 aa17.75■□□□□ 0.43
PTCD1-202ENST00000419981 ERVMER34-1Q9H9K5 563 aa17.75■□□□□ 0.43
PTCD1-202ENST00000419981 ARHGEF38Q9NXL2 777 aa17.75■□□□□ 0.43
PTCD1-202ENST00000419981 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.75■□□□□ 0.43
PTCD1-202ENST00000419981 DKK4Q9UBT3 224 aa17.75■□□□□ 0.43
PTCD1-202ENST00000419981 DMTF1Q9Y222 760 aa17.75■□□□□ 0.43
PTCD1-202ENST00000419981 TBC1D30Q9Y2I9 924 aa17.75■□□□□ 0.43
PTCD1-202ENST00000419981 URB1O60287 2271 aaKnown RBP17.75■□□□□ 0.43
PTCD1-202ENST00000419981 MAGEC1O60732 1142 aa17.74■□□□□ 0.43
PTCD1-202ENST00000419981 ADCY5O95622 1261 aa17.74■□□□□ 0.43
PTCD1-202ENST00000419981 RHOCP08134 193 aa17.74■□□□□ 0.43
PTCD1-202ENST00000419981 CXCR3P49682 368 aa17.74■□□□□ 0.43
PTCD1-202ENST00000419981 RNASE9P60153 205 aaKnown RBP17.74■□□□□ 0.43
PTCD1-202ENST00000419981 KRT83P78385 493 aa17.74■□□□□ 0.43
PTCD1-202ENST00000419981 C19orf48Q6RUI8 117 aa17.74■□□□□ 0.43
PTCD1-202ENST00000419981 TMEM35BQ8NCS4 154 aa17.74■□□□□ 0.43
PTCD1-202ENST00000419981 ARHGAP20Q9P2F6 1191 aa17.74■□□□□ 0.43
PTCD1-202ENST00000419981 PPM1HQ9ULR3 514 aa17.74■□□□□ 0.43
PTCD1-202ENST00000419981 HS3ST2Q9Y278 367 aa17.74■□□□□ 0.43
PTCD1-202ENST00000419981 FARP1Q9Y4F1 1045 aaPredicted RBP17.74■□□□□ 0.43
PTCD1-202ENST00000419981 PAXBP1Q9Y5B6 917 aa17.74■□□□□ 0.43
PTCD1-202ENST00000419981 PCDHGA1Q9Y5H4 931 aa17.74■□□□□ 0.43
PTCD1-202ENST00000419981 ZFYVE26Q68DK2 2539 aa17.74■□□□□ 0.43
PTCD1-202ENST00000419981 ANKRD36A6QL64 1941 aa17.73■□□□□ 0.43
PTCD1-202ENST00000419981 TRABD2BA6NFA1 517 aa17.73■□□□□ 0.43
PTCD1-202ENST00000419981 CBX4O00257 560 aa17.73■□□□□ 0.43
PTCD1-202ENST00000419981 RFPL3O75679 317 aa17.73■□□□□ 0.43
PTCD1-202ENST00000419981 CNTN5O94779 1100 aa17.73■□□□□ 0.43
PTCD1-202ENST00000419981 F9P00740 461 aa17.73■□□□□ 0.43
PTCD1-202ENST00000419981 SRCP12931 536 aa17.73■□□□□ 0.43
PTCD1-202ENST00000419981 TFE3P19532 575 aaPredicted RBP17.73■□□□□ 0.43
PTCD1-202ENST00000419981 CDH5P33151 784 aaPredicted RBP17.73■□□□□ 0.43
PTCD1-202ENST00000419981 DEUP1Q05D60 604 aa17.73■□□□□ 0.43
PTCD1-202ENST00000419981 CAMK2BQ13554 666 aa17.73■□□□□ 0.43
PTCD1-202ENST00000419981 RAPGEF1Q13905 1077 aa17.73■□□□□ 0.43
PTCD1-202ENST00000419981 DRAP1Q14919 205 aaPredicted RBP17.73■□□□□ 0.43
PTCD1-202ENST00000419981 VWA3BQ502W6 1294 aa17.73■□□□□ 0.43
PTCD1-202ENST00000419981 SETMARQ53H47 684 aaPredicted RBP17.73■□□□□ 0.43
PTCD1-202ENST00000419981 ALFQ53S48 1182 aa17.73■□□□□ 0.43
PTCD1-202ENST00000419981 FAM102AQ5T9C2 384 aaPredicted RBP17.73■□□□□ 0.43
PTCD1-202ENST00000419981 IQCHQ86VS3 1027 aa17.73■□□□□ 0.43
PTCD1-202ENST00000419981 TMPRSS12Q86WS5 348 aa17.73■□□□□ 0.43
PTCD1-202ENST00000419981 EID2Q8N6I1 236 aa17.73■□□□□ 0.43
PTCD1-202ENST00000419981 PDCD7Q8N8D1 485 aaKnown RBP17.73■□□□□ 0.43
PTCD1-202ENST00000419981 PGAP3Q96FM1 320 aaPredicted RBP17.73■□□□□ 0.43
PTCD1-202ENST00000419981 CCDC114Q96M63 670 aa17.73■□□□□ 0.43
PTCD1-202ENST00000419981 TUBGCP2Q9BSJ2 902 aa17.73■□□□□ 0.43
PTCD1-202ENST00000419981 C2orf49Q9BVC5 232 aaPredicted RBP17.73■□□□□ 0.43
PTCD1-202ENST00000419981 PREBQ9HCU5 417 aa17.73■□□□□ 0.43
PTCD1-202ENST00000419981 RAXQ9Y2V3 346 aa17.73■□□□□ 0.43
PTCD1-202ENST00000419981 LRRK1Q38SD2 2015 aa17.72■□□□□ 0.43
PTCD1-202ENST00000419981 C1SP09871 688 aa17.72■□□□□ 0.43
PTCD1-202ENST00000419981 CDK4P11802 303 aa17.72■□□□□ 0.43
PTCD1-202ENST00000419981 HOXB3P14651 431 aaPredicted RBP17.72■□□□□ 0.43
PTCD1-202ENST00000419981 HNF1BP35680 557 aa17.72■□□□□ 0.43
PTCD1-202ENST00000419981 SCNN1AP37088 669 aa17.72■□□□□ 0.43
PTCD1-202ENST00000419981 GABRB2P47870 512 aa17.72■□□□□ 0.43
PTCD1-202ENST00000419981 RXRGP48443 463 aa17.72■□□□□ 0.43
PTCD1-202ENST00000419981 CYP4F3Q08477 520 aa17.72■□□□□ 0.43
PTCD1-202ENST00000419981 OVGP1Q12889 678 aa17.72■□□□□ 0.43
PTCD1-202ENST00000419981 BNIP3Q12983 259 aa17.72■□□□□ 0.43
PTCD1-202ENST00000419981 DNAJC3Q13217 504 aa17.72■□□□□ 0.43
PTCD1-202ENST00000419981 STAT4Q14765 748 aa17.72■□□□□ 0.43
PTCD1-202ENST00000419981 MIIPQ5JXC2 388 aa17.72■□□□□ 0.43
PTCD1-202ENST00000419981 LRRC31Q6UY01 552 aa17.72■□□□□ 0.43
PTCD1-202ENST00000419981 SETD3Q86TU7 594 aaPredicted RBP17.72■□□□□ 0.43
PTCD1-202ENST00000419981 SPATS2Q86XZ4 545 aaKnown RBP17.72■□□□□ 0.43
PTCD1-202ENST00000419981 ATP11CQ8NB49 1132 aa17.72■□□□□ 0.43
PTCD1-202ENST00000419981 NT5C3BQ969T7 300 aa17.72■□□□□ 0.43
PTCD1-202ENST00000419981 C18orf8Q96DM3 657 aa17.72■□□□□ 0.43
PTCD1-202ENST00000419981 TBCBQ99426 244 aa17.72■□□□□ 0.43
PTCD1-202ENST00000419981 PSMB7Q99436 277 aa17.72■□□□□ 0.43
PTCD1-202ENST00000419981 ANLNQ9NQW6 1124 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms