RNA–Protein interactions for RNA: ENST00000396394.6

PSMA1-201, Transcript of proteasome subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMA1, Length 1,505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA1-201ENST00000396394 LIASO43766 372 aa13.18□□□□□ -0.3
PSMA1-201ENST00000396394 APBB3O95704 486 aa13.18□□□□□ -0.3
PSMA1-201ENST00000396394 KRT3P12035 628 aa13.18□□□□□ -0.3
PSMA1-201ENST00000396394 ACADSBP45954 432 aa13.18□□□□□ -0.3
PSMA1-201ENST00000396394 ATP1A2P50993 1020 aa13.18□□□□□ -0.3
PSMA1-201ENST00000396394 MESP2Q0VG99 397 aa13.18□□□□□ -0.3
PSMA1-201ENST00000396394 PDCLQ13371 301 aa13.18□□□□□ -0.3
PSMA1-201ENST00000396394 TRIP4Q15650 581 aaPredicted RBP13.18□□□□□ -0.3
PSMA1-201ENST00000396394 CRY1Q16526 586 aa13.18□□□□□ -0.3
PSMA1-201ENST00000396394 PTPN20Q4JDL3 420 aa13.18□□□□□ -0.3
PSMA1-201ENST00000396394 TFDP3Q5H9I0 405 aa13.18□□□□□ -0.3
PSMA1-201ENST00000396394 SPOCD1Q6ZMY3 1216 aa13.18□□□□□ -0.3
PSMA1-201ENST00000396394 TPGS1Q6ZTW0 290 aa13.18□□□□□ -0.3
PSMA1-201ENST00000396394 CCDC50Q8IVM0 306 aa13.18□□□□□ -0.3
PSMA1-201ENST00000396394 GAB3Q8WWW8 586 aa13.18□□□□□ -0.3
PSMA1-201ENST00000396394 MCEEQ96PE7 176 aa13.18□□□□□ -0.3
PSMA1-201ENST00000396394 ASIC3Q9UHC3 531 aa13.18□□□□□ -0.3
PSMA1-201ENST00000396394 ANAPC5Q9UJX4 755 aa13.18□□□□□ -0.3
PSMA1-201ENST00000396394 FBXO10Q9UK96 956 aa13.18□□□□□ -0.3
PSMA1-201ENST00000396394 GMEB2Q9UKD1 530 aa13.18□□□□□ -0.3
PSMA1-201ENST00000396394 AGO1Q9UL18 857 aaKnown RBP13.18□□□□□ -0.3
PSMA1-201ENST00000396394 HBS1LQ9Y450 684 aaKnown RBP13.18□□□□□ -0.3
PSMA1-201ENST00000396394 hCG_1818297A0A087WSY0 165 aa13.17□□□□□ -0.3
PSMA1-201ENST00000396394 EBAG9O00559 213 aa13.17□□□□□ -0.3
PSMA1-201ENST00000396394 AXIN1O15169 862 aa13.17□□□□□ -0.3
PSMA1-201ENST00000396394 GABBR2O75899 941 aa13.17□□□□□ -0.3
PSMA1-201ENST00000396394 TTC4O95801 387 aa13.17□□□□□ -0.3
PSMA1-201ENST00000396394 FAM107AO95990 144 aa13.17□□□□□ -0.3
PSMA1-201ENST00000396394 SHBGP04278 402 aa13.17□□□□□ -0.3
PSMA1-201ENST00000396394 ITGAVP06756 1048 aa13.17□□□□□ -0.3
PSMA1-201ENST00000396394 RETP07949 1114 aa13.17□□□□□ -0.3
PSMA1-201ENST00000396394 CHRM1P11229 460 aaPredicted RBP13.17□□□□□ -0.3
PSMA1-201ENST00000396394 CORO1AP31146 461 aaKnown RBP13.17□□□□□ -0.3
PSMA1-201ENST00000396394 HOXC13P31276 330 aa13.17□□□□□ -0.3
PSMA1-201ENST00000396394 ADCY8P40145 1251 aa13.17□□□□□ -0.3
PSMA1-201ENST00000396394 CDKN2BP42772 138 aa13.17□□□□□ -0.3
PSMA1-201ENST00000396394 MMP13P45452 471 aa13.17□□□□□ -0.3
PSMA1-201ENST00000396394 HARS2P49590 506 aaKnown RBP13.17□□□□□ -0.3
PSMA1-201ENST00000396394 RGS7P49802 495 aa13.17□□□□□ -0.3
PSMA1-201ENST00000396394 DGKEP52429 567 aa13.17□□□□□ -0.3
PSMA1-201ENST00000396394 MAGOHP61326 146 aaKnown RBP13.17□□□□□ -0.3
PSMA1-201ENST00000396394 GUCY1A3Q02108 690 aa13.17□□□□□ -0.3
PSMA1-201ENST00000396394 OGDHQ02218 1023 aa13.17□□□□□ -0.3
PSMA1-201ENST00000396394 KDSRQ06136 332 aa13.17□□□□□ -0.3
PSMA1-201ENST00000396394 SNX1Q13596 522 aa13.17□□□□□ -0.3
PSMA1-201ENST00000396394 HADHQ16836 314 aaKnown RBP13.17□□□□□ -0.3
PSMA1-201ENST00000396394 ODF2Q5BJF6 829 aa13.17□□□□□ -0.3
PSMA1-201ENST00000396394 EOGTQ5NDL2 527 aa13.17□□□□□ -0.3
PSMA1-201ENST00000396394 GRAMD4Q6IC98 578 aa13.17□□□□□ -0.3
PSMA1-201ENST00000396394 FOXR1Q6PIV2 292 aa13.17□□□□□ -0.3
PSMA1-201ENST00000396394 MFSD7Q6UXD7 560 aa13.17□□□□□ -0.3
PSMA1-201ENST00000396394 PRR23BQ6ZRT6 265 aa13.17□□□□□ -0.3
PSMA1-201ENST00000396394 CEP68Q76N32 757 aa13.17□□□□□ -0.3
PSMA1-201ENST00000396394 TRMT11Q7Z4G4 463 aaKnown RBP13.17□□□□□ -0.3
PSMA1-201ENST00000396394 FAM217AQ8IXS0 508 aa13.17□□□□□ -0.3
PSMA1-201ENST00000396394 CPXM2Q8N436 756 aa13.17□□□□□ -0.3
PSMA1-201ENST00000396394 DCLK2Q8N568 766 aa13.17□□□□□ -0.3
PSMA1-201ENST00000396394 TERB1Q8NA31 727 aa13.17□□□□□ -0.3
PSMA1-201ENST00000396394 IL17RCQ8NAC3 791 aa13.17□□□□□ -0.3
PSMA1-201ENST00000396394 TTC13Q8NBP0 860 aa13.17□□□□□ -0.3
PSMA1-201ENST00000396394 TSTD1Q8NFU3 115 aa13.17□□□□□ -0.3
PSMA1-201ENST00000396394 ATG4AQ8WYN0 398 aa13.17□□□□□ -0.3
PSMA1-201ENST00000396394 SERPINB12Q96P63 405 aa13.17□□□□□ -0.3
PSMA1-201ENST00000396394 HHIPQ96QV1 700 aa13.17□□□□□ -0.3
PSMA1-201ENST00000396394 HEMGNQ9BXL5 484 aa13.17□□□□□ -0.3
PSMA1-201ENST00000396394 DNAJC17Q9NVM6 304 aaKnown RBP13.17□□□□□ -0.3
PSMA1-201ENST00000396394 POLR3BQ9NW08 1133 aaPredicted RBP13.17□□□□□ -0.3
PSMA1-201ENST00000396394 FRYLO94915 3013 aa13.17□□□□□ -0.3
PSMA1-201ENST00000396394 FAM186AA6NE01 2351 aa13.16□□□□□ -0.3
PSMA1-201ENST00000396394 ATXN2Q99700 1313 aaKnown RBP13.16□□□□□ -0.3
PSMA1-201ENST00000396394 C3orf70A6NLC5 250 aaPredicted RBP13.16□□□□□ -0.3
PSMA1-201ENST00000396394 LRP3O75074 770 aa13.16□□□□□ -0.3
PSMA1-201ENST00000396394 RPP40O75818 363 aaKnown RBP13.16□□□□□ -0.3
PSMA1-201ENST00000396394 LATS1O95835 1130 aa13.16□□□□□ -0.3
PSMA1-201ENST00000396394 PENKP01210 267 aaPredicted RBP13.16□□□□□ -0.3
PSMA1-201ENST00000396394 LTFP02788 710 aa13.16□□□□□ -0.3
PSMA1-201ENST00000396394 CYBBP04839 570 aa13.16□□□□□ -0.3
PSMA1-201ENST00000396394 HMBSP08397 361 aa13.16□□□□□ -0.3
PSMA1-201ENST00000396394 RFC1P35251 1148 aaPredicted RBP13.16□□□□□ -0.3
PSMA1-201ENST00000396394 PCK1P35558 622 aa13.16□□□□□ -0.3
PSMA1-201ENST00000396394 TIE1P35590 1138 aa13.16□□□□□ -0.3
PSMA1-201ENST00000396394 PXNP49023 591 aaPredicted RBP13.16□□□□□ -0.3
PSMA1-201ENST00000396394 DGKGP49619 791 aa13.16□□□□□ -0.3
PSMA1-201ENST00000396394 ITGA8P53708 1063 aa13.16□□□□□ -0.3
PSMA1-201ENST00000396394 SRSF5Q13243 272 aaKnown RBP13.16□□□□□ -0.3
PSMA1-201ENST00000396394 HIBCHQ6NVY1 386 aaPredicted RBP13.16□□□□□ -0.3
PSMA1-201ENST00000396394 MSANTD2Q6P1R3 559 aa13.16□□□□□ -0.3
PSMA1-201ENST00000396394 BEND5Q7L4P6 421 aa13.16□□□□□ -0.3
PSMA1-201ENST00000396394 ANKS1BQ7Z6G8 1248 aa13.16□□□□□ -0.3
PSMA1-201ENST00000396394 SRLQ86TD4 932 aa13.16□□□□□ -0.3
PSMA1-201ENST00000396394 TMEM110Q86TL2 294 aa13.16□□□□□ -0.3
PSMA1-201ENST00000396394 RASSF3Q86WH2 238 aa13.16□□□□□ -0.3
PSMA1-201ENST00000396394 XYLT1Q86Y38 959 aa13.16□□□□□ -0.3
PSMA1-201ENST00000396394 DENND1CQ8IV53 801 aa13.16□□□□□ -0.3
PSMA1-201ENST00000396394 SFTPA1Q8IWL2 248 aa13.16□□□□□ -0.3
PSMA1-201ENST00000396394 EDEM1Q92611 657 aa13.16□□□□□ -0.3
PSMA1-201ENST00000396394 SLC4A5Q9BY07 1137 aa13.16□□□□□ -0.3
PSMA1-201ENST00000396394 PHACTR1Q9C0D0 580 aa13.16□□□□□ -0.3
PSMA1-201ENST00000396394 CENPHQ9H3R5 247 aa13.16□□□□□ -0.3
PSMA1-201ENST00000396394 SFMBT1Q9UHJ3 866 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms