RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 RAB6CQ53S08 254 aa12.98□□□□□ -0.33
GGPS1-203ENST00000391855 ARTNQ5T4W7 220 aa12.98□□□□□ -0.33
GGPS1-203ENST00000391855 RWDD4Q6NW29 188 aaKnown RBP12.98□□□□□ -0.33
GGPS1-203ENST00000391855 SARM1Q6SZW1 724 aa12.98□□□□□ -0.33
GGPS1-203ENST00000391855 NLRP14Q86W24 1093 aa12.98□□□□□ -0.33
GGPS1-203ENST00000391855 CACUL1Q86Y37 369 aa12.98□□□□□ -0.33
GGPS1-203ENST00000391855 PSTKQ8IV42 348 aaKnown RBP12.98□□□□□ -0.33
GGPS1-203ENST00000391855 VSTM4Q8IW00 320 aa12.98□□□□□ -0.33
GGPS1-203ENST00000391855 SH2D3CQ8N5H7 860 aa12.98□□□□□ -0.33
GGPS1-203ENST00000391855 OR8K1Q8NGG5 319 aa12.98□□□□□ -0.33
GGPS1-203ENST00000391855 FRS2Q8WU20 508 aa12.98□□□□□ -0.33
GGPS1-203ENST00000391855 PTPRN2Q92932 1015 aa12.98□□□□□ -0.33
GGPS1-203ENST00000391855 PSMB7Q99436 277 aa12.98□□□□□ -0.33
GGPS1-203ENST00000391855 RTKNQ9BST9 563 aa12.98□□□□□ -0.33
GGPS1-203ENST00000391855 GPR174Q9BXC1 333 aa12.98□□□□□ -0.33
GGPS1-203ENST00000391855 NUSAP1Q9BXS6 441 aaKnown RBP12.98□□□□□ -0.33
GGPS1-203ENST00000391855 BTBD1Q9H0C5 482 aa12.98□□□□□ -0.33
GGPS1-203ENST00000391855 RAB6CQ9H0N0 254 aa12.98□□□□□ -0.33
GGPS1-203ENST00000391855 CATSPERBQ9H7T0 1116 aa12.98□□□□□ -0.33
GGPS1-203ENST00000391855 ATP13A1Q9HD20 1204 aa12.98□□□□□ -0.33
GGPS1-203ENST00000391855 CD93Q9NPY3 652 aa12.98□□□□□ -0.33
GGPS1-203ENST00000391855 ZNHIT6Q9NWK9 470 aaKnown RBP12.98□□□□□ -0.33
GGPS1-203ENST00000391855 VPS51Q9UID3 782 aa12.98□□□□□ -0.33
GGPS1-203ENST00000391855 FZD4Q9ULV1 537 aa12.98□□□□□ -0.33
GGPS1-203ENST00000391855 TPX2Q9ULW0 747 aaKnown RBP12.98□□□□□ -0.33
GGPS1-203ENST00000391855 FZD10Q9ULW2 581 aa12.98□□□□□ -0.33
GGPS1-203ENST00000391855 ABCA7Q8IZY2 2146 aa12.98□□□□□ -0.33
GGPS1-203ENST00000391855 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.97□□□□□ -0.33
GGPS1-203ENST00000391855 SSU72P8A0A1W2PR75 194 aa12.97□□□□□ -0.33
GGPS1-203ENST00000391855 C1QTNF3-AMACRE9PGA6 284 aa12.97□□□□□ -0.33
GGPS1-203ENST00000391855 SLC30A4O14863 429 aa12.97□□□□□ -0.33
GGPS1-203ENST00000391855 RAMP2O60895 175 aa12.97□□□□□ -0.33
GGPS1-203ENST00000391855 SRCP12931 536 aa12.97□□□□□ -0.33
GGPS1-203ENST00000391855 GNSP15586 552 aa12.97□□□□□ -0.33
GGPS1-203ENST00000391855 C5AR1P21730 350 aa12.97□□□□□ -0.33
GGPS1-203ENST00000391855 DLG2Q15700 870 aa12.97□□□□□ -0.33
GGPS1-203ENST00000391855 CCDC6Q16204 474 aa12.97□□□□□ -0.33
GGPS1-203ENST00000391855 DUOXA1Q1HG43 343 aa12.97□□□□□ -0.33
GGPS1-203ENST00000391855 RSPO4Q2I0M5 234 aaPredicted RBP12.97□□□□□ -0.33
GGPS1-203ENST00000391855 ACCSLQ4AC99 568 aa12.97□□□□□ -0.33
GGPS1-203ENST00000391855 TRIM61Q5EBN2 209 aa12.97□□□□□ -0.33
GGPS1-203ENST00000391855 FAM46CQ5VWP2 391 aa12.97□□□□□ -0.33
GGPS1-203ENST00000391855 ALKBH5Q6P6C2 394 aaKnown RBP12.97□□□□□ -0.33
GGPS1-203ENST00000391855 SLC23A3Q6PIS1 610 aa12.97□□□□□ -0.33
GGPS1-203ENST00000391855 SLC41A1Q8IVJ1 513 aa12.97□□□□□ -0.33
GGPS1-203ENST00000391855 DNASE2BQ8WZ79 361 aa12.97□□□□□ -0.33
GGPS1-203ENST00000391855 RMDN1Q96DB5 314 aa12.97□□□□□ -0.33
GGPS1-203ENST00000391855 DNAJC7Q99615 494 aa12.97□□□□□ -0.33
GGPS1-203ENST00000391855 EDEM2Q9BV94 578 aa12.97□□□□□ -0.33
GGPS1-203ENST00000391855 CEP44Q9C0F1 390 aa12.97□□□□□ -0.33
GGPS1-203ENST00000391855 MAGEH1Q9H213 219 aa12.97□□□□□ -0.33
GGPS1-203ENST00000391855 MTG2Q9H4K7 406 aa12.97□□□□□ -0.33
GGPS1-203ENST00000391855 ARHGAP20Q9P2F6 1191 aa12.97□□□□□ -0.33
GGPS1-203ENST00000391855 MYO1AQ9UBC5 1043 aa12.97□□□□□ -0.33
GGPS1-203ENST00000391855 AP4E1Q9UPM8 1137 aa12.97□□□□□ -0.33
GGPS1-203ENST00000391855 NEU3Q9UQ49 428 aa12.97□□□□□ -0.33
GGPS1-203ENST00000391855 A0A087X0T9 212 aa12.96□□□□□ -0.33
GGPS1-203ENST00000391855 A0A0D9SEW6 157 aa12.96□□□□□ -0.33
GGPS1-203ENST00000391855 ZSCAN5CA6NGD5 496 aaPredicted RBP12.96□□□□□ -0.33
GGPS1-203ENST00000391855 METTL12A8MUP2 240 aa12.96□□□□□ -0.33
GGPS1-203ENST00000391855 WASH4PA8MWX3 477 aa12.96□□□□□ -0.33
GGPS1-203ENST00000391855 MCF2LO15068 1137 aa12.96□□□□□ -0.33
GGPS1-203ENST00000391855 PRPSAP2O60256 369 aa12.96□□□□□ -0.33
GGPS1-203ENST00000391855 SNAP91O60641 907 aa12.96□□□□□ -0.33
GGPS1-203ENST00000391855 SEMA4FO95754 770 aa12.96□□□□□ -0.33
GGPS1-203ENST00000391855 FAM228BP0C875 321 aa12.96□□□□□ -0.33
GGPS1-203ENST00000391855 ITPKAP23677 461 aa12.96□□□□□ -0.33
GGPS1-203ENST00000391855 EPHB2P29323 1055 aa12.96□□□□□ -0.33
GGPS1-203ENST00000391855 PCK1P35558 622 aa12.96□□□□□ -0.33
GGPS1-203ENST00000391855 PSMD8P48556 350 aa12.96□□□□□ -0.33
GGPS1-203ENST00000391855 SEMA3BQ13214 749 aa12.96□□□□□ -0.33
GGPS1-203ENST00000391855 IL31Q6EBC2 164 aa12.96□□□□□ -0.33
GGPS1-203ENST00000391855 CNGA4Q8IV77 575 aa12.96□□□□□ -0.33
GGPS1-203ENST00000391855 MMAAQ8IVH4 418 aaKnown RBP12.96□□□□□ -0.33
GGPS1-203ENST00000391855 RGL4Q8IZJ4 473 aa12.96□□□□□ -0.33
GGPS1-203ENST00000391855 STK40Q8N2I9 435 aa12.96□□□□□ -0.33
GGPS1-203ENST00000391855 RTL3Q8N8U3 475 aaKnown RBP12.96□□□□□ -0.33
GGPS1-203ENST00000391855 ATP11CQ8NB49 1132 aa12.96□□□□□ -0.33
GGPS1-203ENST00000391855 OR7D4Q8NG98 312 aa12.96□□□□□ -0.33
GGPS1-203ENST00000391855 FAM129BQ96TA1 746 aa12.96□□□□□ -0.33
GGPS1-203ENST00000391855 OMDQ99983 421 aa12.96□□□□□ -0.33
GGPS1-203ENST00000391855 SPON2Q9BUD6 331 aa12.96□□□□□ -0.33
GGPS1-203ENST00000391855 ACE2Q9BYF1 805 aaPredicted RBP12.96□□□□□ -0.33
GGPS1-203ENST00000391855 FBXL12Q9NXK8 326 aa12.96□□□□□ -0.33
GGPS1-203ENST00000391855 LCMT1Q9UIC8 334 aa12.96□□□□□ -0.33
GGPS1-203ENST00000391855 HPCAL4Q9UM19 191 aa12.96□□□□□ -0.33
GGPS1-203ENST00000391855 SLC6A14Q9UN76 642 aa12.96□□□□□ -0.33
GGPS1-203ENST00000391855 CEP192Q8TEP8 1941 aa12.96□□□□□ -0.33
GGPS1-203ENST00000391855 DMDP11532 3685 aa12.96□□□□□ -0.34
GGPS1-203ENST00000391855 FAM72CH0Y354 149 aa12.96□□□□□ -0.34
GGPS1-203ENST00000391855 CBX4O00257 560 aa12.96□□□□□ -0.34
GGPS1-203ENST00000391855 MID1O15344 667 aa12.96□□□□□ -0.34
GGPS1-203ENST00000391855 SLC7A4O43246 635 aa12.96□□□□□ -0.34
GGPS1-203ENST00000391855 SLC8A1P32418 973 aa12.96□□□□□ -0.34
GGPS1-203ENST00000391855 RECQLP46063 649 aaPredicted RBP12.96□□□□□ -0.34
GGPS1-203ENST00000391855 SERPINH1P50454 418 aaKnown RBP12.96□□□□□ -0.34
GGPS1-203ENST00000391855 YBEYP58557 167 aaPredicted RBP12.96□□□□□ -0.34
GGPS1-203ENST00000391855 TPI1P60174 286 aa12.96□□□□□ -0.34
GGPS1-203ENST00000391855 ZNF252P-AS1Q0IIN9 211 aa12.96□□□□□ -0.34
GGPS1-203ENST00000391855 CCDC15Q0P6D6 951 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms