RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 MBLAC2Q68D91 279 aa11.03□□□□□ -0.64
RTN3-201ENST00000338850 KCNT2Q6UVM3 1135 aa11.03□□□□□ -0.64
RTN3-201ENST00000338850 PDZD4Q76G19 769 aaPredicted RBP11.03□□□□□ -0.64
RTN3-201ENST00000338850 PPFIBP2Q8ND30 876 aa11.03□□□□□ -0.64
RTN3-201ENST00000338850 OR6Y1Q8NGX8 325 aa11.03□□□□□ -0.64
RTN3-201ENST00000338850 PIWIL2Q8TC59 973 aaKnown RBP11.03□□□□□ -0.64
RTN3-201ENST00000338850 JADE3Q92613 823 aa11.03□□□□□ -0.64
RTN3-201ENST00000338850 STMN2Q93045 179 aa11.03□□□□□ -0.64
RTN3-201ENST00000338850 MRRFQ96E11 262 aaKnown RBP11.03□□□□□ -0.64
RTN3-201ENST00000338850 CASD1Q96PB1 797 aa11.03□□□□□ -0.64
RTN3-201ENST00000338850 KLF6Q99612 283 aaPredicted RBP11.03□□□□□ -0.64
RTN3-201ENST00000338850 NMUR2Q9GZQ4 415 aa11.03□□□□□ -0.64
RTN3-201ENST00000338850 DDX43Q9NXZ2 648 aaKnown RBP11.03□□□□□ -0.64
RTN3-201ENST00000338850 RRN3Q9NYV6 651 aa11.03□□□□□ -0.64
RTN3-201ENST00000338850 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.03□□□□□ -0.64
RTN3-201ENST00000338850 DTLQ9NZJ0 730 aa11.03□□□□□ -0.64
RTN3-201ENST00000338850 CLEC1BQ9P126 229 aa11.03□□□□□ -0.64
RTN3-201ENST00000338850 FZD10Q9ULW2 581 aa11.03□□□□□ -0.64
RTN3-201ENST00000338850 SUFUQ9UMX1 484 aa11.03□□□□□ -0.64
RTN3-201ENST00000338850 WDR91A4D1P6 747 aa11.02□□□□□ -0.65
RTN3-201ENST00000338850 TMEM114B3SHH9 223 aa11.02□□□□□ -0.65
RTN3-201ENST00000338850 HOXA2O43364 376 aa11.02□□□□□ -0.65
RTN3-201ENST00000338850 PLIN3O60664 434 aa11.02□□□□□ -0.65
RTN3-201ENST00000338850 ENTPD5O75356 428 aa11.02□□□□□ -0.65
RTN3-201ENST00000338850 CIB2O75838 187 aa11.02□□□□□ -0.65
RTN3-201ENST00000338850 GABBR2O75899 941 aa11.02□□□□□ -0.65
RTN3-201ENST00000338850 SNUPNO95149 360 aaKnown RBP11.02□□□□□ -0.65
RTN3-201ENST00000338850 METTL18O95568 372 aa11.02□□□□□ -0.65
RTN3-201ENST00000338850 GSRP00390 522 aa11.02□□□□□ -0.65
RTN3-201ENST00000338850 LAG3P18627 525 aa11.02□□□□□ -0.65
RTN3-201ENST00000338850 WARSP23381 471 aaKnown RBP11.02□□□□□ -0.65
RTN3-201ENST00000338850 PLA2G5P39877 138 aa11.02□□□□□ -0.65
RTN3-201ENST00000338850 GP5P40197 560 aa11.02□□□□□ -0.65
RTN3-201ENST00000338850 ABL2P42684 1182 aa11.02□□□□□ -0.65
RTN3-201ENST00000338850 HARS2P49590 506 aaKnown RBP11.02□□□□□ -0.65
RTN3-201ENST00000338850 ERVFC1P60507 584 aa11.02□□□□□ -0.65
RTN3-201ENST00000338850 CHI3L2Q15782 390 aa11.02□□□□□ -0.65
RTN3-201ENST00000338850 CA9Q16790 459 aa11.02□□□□□ -0.65
RTN3-201ENST00000338850 CDO1Q16878 200 aa11.02□□□□□ -0.65
RTN3-201ENST00000338850 KHDC1Q4VXA5 237 aaKnown RBP11.02□□□□□ -0.65
RTN3-201ENST00000338850 RABGAP1LQ5R372 815 aa11.02□□□□□ -0.65
RTN3-201ENST00000338850 GRTP1Q5TC63 336 aa11.02□□□□□ -0.65
RTN3-201ENST00000338850 FAXCQ5TGI0 409 aa11.02□□□□□ -0.65
RTN3-201ENST00000338850 C9orf57Q5W0N0 161 aa11.02□□□□□ -0.65
RTN3-201ENST00000338850 CAPRIN2Q6IMN6 1127 aaKnown RBP11.02□□□□□ -0.65
RTN3-201ENST00000338850 ANO7Q6IWH7 933 aa11.02□□□□□ -0.65
RTN3-201ENST00000338850 NOTUMQ6P988 496 aa11.02□□□□□ -0.65
RTN3-201ENST00000338850 PACS1Q6VY07 963 aa11.02□□□□□ -0.65
RTN3-201ENST00000338850 DSTYKQ6XUX3 929 aa11.02□□□□□ -0.65
RTN3-201ENST00000338850 LRRC74BQ6ZQY2 392 aa11.02□□□□□ -0.65
RTN3-201ENST00000338850 RBM23Q86U06 439 aaKnown RBP11.02□□□□□ -0.65
RTN3-201ENST00000338850 ZNF598Q86UK7 904 aaKnown RBP11.02□□□□□ -0.65
RTN3-201ENST00000338850 MYLK4Q86YV6 388 aaPredicted RBP11.02□□□□□ -0.65
RTN3-201ENST00000338850 ARID3BQ8IVW6 561 aaPredicted RBP11.02□□□□□ -0.65
RTN3-201ENST00000338850 NDUFAF2Q8N183 169 aa11.02□□□□□ -0.65
RTN3-201ENST00000338850 TOP6BLQ8N6T0 577 aa11.02□□□□□ -0.65
RTN3-201ENST00000338850 ARMC2Q8NEN0 867 aa11.02□□□□□ -0.65
RTN3-201ENST00000338850 SLC7A14Q8TBB6 771 aa11.02□□□□□ -0.65
RTN3-201ENST00000338850 DEPDC1BQ8WUY9 529 aa11.02□□□□□ -0.65
RTN3-201ENST00000338850 NLRP7Q8WX94 980 aa11.02□□□□□ -0.65
RTN3-201ENST00000338850 TNIP3Q96KP6 325 aa11.02□□□□□ -0.65
RTN3-201ENST00000338850 SLC2A13Q96QE2 648 aa11.02□□□□□ -0.65
RTN3-201ENST00000338850 NR1H4Q96RI1 486 aaPredicted RBP11.02□□□□□ -0.65
RTN3-201ENST00000338850 KCTD15Q96SI1 283 aaPredicted RBP11.02□□□□□ -0.65
RTN3-201ENST00000338850 VAT1Q99536 393 aa11.02□□□□□ -0.65
RTN3-201ENST00000338850 HNRNPABQ99729 332 aaKnown RBP11.02□□□□□ -0.65
RTN3-201ENST00000338850 CPNE1Q99829 537 aa11.02□□□□□ -0.65
RTN3-201ENST00000338850 MRPL45Q9BRJ2 306 aaKnown RBP11.02□□□□□ -0.65
RTN3-201ENST00000338850 VCXQ9H320 206 aa11.02□□□□□ -0.65
RTN3-201ENST00000338850 TLR9Q9NR96 1032 aa11.02□□□□□ -0.65
RTN3-201ENST00000338850 FBXO6Q9NRD1 293 aaPredicted RBP11.02□□□□□ -0.65
RTN3-201ENST00000338850 NMRK1Q9NWW6 199 aa11.02□□□□□ -0.65
RTN3-201ENST00000338850 STAP1Q9ULZ2 295 aa11.02□□□□□ -0.65
RTN3-201ENST00000338850 SOX13Q9UN79 622 aa11.02□□□□□ -0.65
RTN3-201ENST00000338850 HEY1Q9Y5J3 304 aa11.02□□□□□ -0.65
RTN3-201ENST00000338850 A0A0U1RQF3 1178 aa11.01□□□□□ -0.65
RTN3-201ENST00000338850 FAM237BA0A1B0GVD1 139 aa11.01□□□□□ -0.65
RTN3-201ENST00000338850 DCXO43602 365 aa11.01□□□□□ -0.65
RTN3-201ENST00000338850 CCNT2O60583 730 aaKnown RBP11.01□□□□□ -0.65
RTN3-201ENST00000338850 FBXO21O94952 628 aa11.01□□□□□ -0.65
RTN3-201ENST00000338850 APOA4P06727 396 aa11.01□□□□□ -0.65
RTN3-201ENST00000338850 PIM1P11309 404 aaPredicted RBP11.01□□□□□ -0.65
RTN3-201ENST00000338850 FGF3P11487 239 aaPredicted RBP11.01□□□□□ -0.65
RTN3-201ENST00000338850 ACAT1P24752 427 aaKnown RBP11.01□□□□□ -0.65
RTN3-201ENST00000338850 ADSLP30566 484 aaPredicted RBP11.01□□□□□ -0.65
RTN3-201ENST00000338850 NOS2P35228 1153 aa11.01□□□□□ -0.65
RTN3-201ENST00000338850 PGM1P36871 562 aa11.01□□□□□ -0.65
RTN3-201ENST00000338850 NUMBP49757 651 aa11.01□□□□□ -0.65
RTN3-201ENST00000338850 CSE1LP55060 971 aaKnown RBP11.01□□□□□ -0.65
RTN3-201ENST00000338850 IRX1P78414 480 aaPredicted RBP11.01□□□□□ -0.65
RTN3-201ENST00000338850 GBE1Q04446 702 aa11.01□□□□□ -0.65
RTN3-201ENST00000338850 SLC10A2Q12908 348 aaPredicted RBP11.01□□□□□ -0.65
RTN3-201ENST00000338850 ORC1Q13415 861 aa11.01□□□□□ -0.65
RTN3-201ENST00000338850 TUBB3Q13509 450 aa11.01□□□□□ -0.65
RTN3-201ENST00000338850 KPNB1Q14974 876 aaKnown RBP11.01□□□□□ -0.65
RTN3-201ENST00000338850 RCN1Q15293 331 aa11.01□□□□□ -0.65
RTN3-201ENST00000338850 CCDC6Q16204 474 aa11.01□□□□□ -0.65
RTN3-201ENST00000338850 MUM1Q2TAK8 710 aa11.01□□□□□ -0.65
RTN3-201ENST00000338850 SV2CQ496J9 727 aa11.01□□□□□ -0.65
RTN3-201ENST00000338850 HSF5Q4G112 596 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms