RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 DNAJB4Q9UDY4 337 aa23.84■■□□□ 1.41
NDEL1-201ENST00000334527 NUP205Q92621 2012 aa23.84■■□□□ 1.41
NDEL1-201ENST00000334527 HHLA1C9JL84 531 aa23.84■■□□□ 1.41
NDEL1-201ENST00000334527 GOLGA8TH3BQL2 631 aa23.84■■□□□ 1.41
NDEL1-201ENST00000334527 FKBP6O75344 327 aa23.84■■□□□ 1.41
NDEL1-201ENST00000334527 JCHAINP01591 159 aa23.84■■□□□ 1.41
NDEL1-201ENST00000334527 CSE1LP55060 971 aaKnown RBP23.84■■□□□ 1.41
NDEL1-201ENST00000334527 BHLHA9Q7RTU4 235 aa23.84■■□□□ 1.41
NDEL1-201ENST00000334527 PHTF2Q8N3S3 785 aa23.84■■□□□ 1.41
NDEL1-201ENST00000334527 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP23.84■■□□□ 1.41
NDEL1-201ENST00000334527 VPS39Q96JC1 886 aa23.84■■□□□ 1.41
NDEL1-201ENST00000334527 TEKT5Q96M29 485 aa23.84■■□□□ 1.41
NDEL1-201ENST00000334527 VAT1Q99536 393 aa23.84■■□□□ 1.41
NDEL1-201ENST00000334527 MAN1C1Q9NR34 630 aa23.84■■□□□ 1.41
NDEL1-201ENST00000334527 RRN3Q9NYV6 651 aa23.84■■□□□ 1.41
NDEL1-201ENST00000334527 DCXO43602 365 aa23.83■■□□□ 1.41
NDEL1-201ENST00000334527 LRIG2O94898 1065 aa23.83■■□□□ 1.41
NDEL1-201ENST00000334527 NMBRP28336 390 aa23.83■■□□□ 1.41
NDEL1-201ENST00000334527 EPHB1P54762 984 aa23.83■■□□□ 1.41
NDEL1-201ENST00000334527 EPGNQ6UW88 154 aa23.83■■□□□ 1.41
NDEL1-201ENST00000334527 AGR3Q8TD06 166 aa23.83■■□□□ 1.41
NDEL1-201ENST00000334527 GAD1Q99259 594 aa23.83■■□□□ 1.41
NDEL1-201ENST00000334527 CYP4F11Q9HBI6 524 aa23.83■■□□□ 1.41
NDEL1-201ENST00000334527 DLGAP2Q9P1A6 1054 aa23.83■■□□□ 1.41
NDEL1-201ENST00000334527 CPSF2Q9P2I0 782 aaKnown RBP23.83■■□□□ 1.41
NDEL1-201ENST00000334527 CLEC11AQ9Y240 323 aa23.83■■□□□ 1.41
NDEL1-201ENST00000334527 LOC100653049A0A140TA62 436 aa23.83■■□□□ 1.4
NDEL1-201ENST00000334527 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.83■■□□□ 1.4
NDEL1-201ENST00000334527 TMEM114B3SHH9 223 aa23.83■■□□□ 1.4
NDEL1-201ENST00000334527 TRIM13O60858 407 aa23.83■■□□□ 1.4
NDEL1-201ENST00000334527 KRT34O76011 436 aa23.83■■□□□ 1.4
NDEL1-201ENST00000334527 CXCR3P49682 368 aa23.83■■□□□ 1.4
NDEL1-201ENST00000334527 C3orf58Q8NDZ4 430 aa23.83■■□□□ 1.4
NDEL1-201ENST00000334527 SLC39A10Q9ULF5 831 aa23.83■■□□□ 1.4
NDEL1-201ENST00000334527 PTCH2Q9Y6C5 1203 aa23.83■■□□□ 1.4
NDEL1-201ENST00000334527 CCDC78A2IDD5 438 aa23.82■■□□□ 1.4
NDEL1-201ENST00000334527 E9PBE3 544 aa23.82■■□□□ 1.4
NDEL1-201ENST00000334527 CCNT2O60583 730 aaKnown RBP23.82■■□□□ 1.4
NDEL1-201ENST00000334527 KLHL41O60662 606 aa23.82■■□□□ 1.4
NDEL1-201ENST00000334527 PDE5AO76074 875 aa23.82■■□□□ 1.4
NDEL1-201ENST00000334527 PEX6Q13608 980 aa23.82■■□□□ 1.4
NDEL1-201ENST00000334527 SLC9B1Q4ZJI4 515 aa23.82■■□□□ 1.4
NDEL1-201ENST00000334527 SMARCD1Q96GM5 515 aa23.82■■□□□ 1.4
NDEL1-201ENST00000334527 MCMBPQ9BTE3 642 aa23.82■■□□□ 1.4
NDEL1-201ENST00000334527 CDH9Q9ULB4 789 aa23.82■■□□□ 1.4
NDEL1-201ENST00000334527 THP07101 528 aa23.81■■□□□ 1.4
NDEL1-201ENST00000334527 CDH17Q12864 832 aa23.81■■□□□ 1.4
NDEL1-201ENST00000334527 PRPSAP1Q14558 356 aa23.81■■□□□ 1.4
NDEL1-201ENST00000334527 PPP2R5DQ14738 602 aa23.81■■□□□ 1.4
NDEL1-201ENST00000334527 FSCBQ5H9T9 825 aa23.81■■□□□ 1.4
NDEL1-201ENST00000334527 IZUMO2Q6UXV1 221 aa23.81■■□□□ 1.4
NDEL1-201ENST00000334527 RAPH1Q70E73 1250 aa23.81■■□□□ 1.4
NDEL1-201ENST00000334527 TDRD5Q8NAT2 981 aaKnown RBP23.81■■□□□ 1.4
NDEL1-201ENST00000334527 ACTRT2Q8TDY3 377 aa23.81■■□□□ 1.4
NDEL1-201ENST00000334527 RNF34Q969K3 372 aa23.81■■□□□ 1.4
NDEL1-201ENST00000334527 AP5M1Q9H0R1 490 aa23.81■■□□□ 1.4
NDEL1-201ENST00000334527 VCXQ9H320 206 aa23.81■■□□□ 1.4
NDEL1-201ENST00000334527 CPA4Q9UI42 421 aa23.81■■□□□ 1.4
NDEL1-201ENST00000334527 ZBTB14O43829 449 aa23.81■■□□□ 1.4
NDEL1-201ENST00000334527 MAP2K5Q13163 448 aa23.81■■□□□ 1.4
NDEL1-201ENST00000334527 CUL3Q13618 768 aa23.81■■□□□ 1.4
NDEL1-201ENST00000334527 GRM3Q14832 879 aa23.81■■□□□ 1.4
NDEL1-201ENST00000334527 NAPEPLDQ6IQ20 393 aa23.81■■□□□ 1.4
NDEL1-201ENST00000334527 AAGABQ6PD74 315 aa23.81■■□□□ 1.4
NDEL1-201ENST00000334527 FRMD7Q6ZUT3 714 aa23.81■■□□□ 1.4
NDEL1-201ENST00000334527 PAXIP1Q6ZW49 1069 aaPredicted RBP23.81■■□□□ 1.4
NDEL1-201ENST00000334527 OTOP3Q7RTS5 596 aa23.81■■□□□ 1.4
NDEL1-201ENST00000334527 TAC4Q86UU9 113 aa23.81■■□□□ 1.4
NDEL1-201ENST00000334527 MAPK15Q8TD08 544 aa23.81■■□□□ 1.4
NDEL1-201ENST00000334527 USP33Q8TEY7 942 aa23.81■■□□□ 1.4
NDEL1-201ENST00000334527 LPPQ93052 612 aa23.81■■□□□ 1.4
NDEL1-201ENST00000334527 APBA2Q99767 749 aa23.81■■□□□ 1.4
NDEL1-201ENST00000334527 S100A14Q9HCY8 104 aa23.81■■□□□ 1.4
NDEL1-201ENST00000334527 CDH22Q9UJ99 828 aa23.81■■□□□ 1.4
NDEL1-201ENST00000334527 H2AFYO75367 372 aaKnown RBP23.8■■□□□ 1.4
NDEL1-201ENST00000334527 SORBS2O94875 1100 aaKnown RBP23.8■■□□□ 1.4
NDEL1-201ENST00000334527 GNAT1P11488 350 aa23.8■■□□□ 1.4
NDEL1-201ENST00000334527 ITGAXP20702 1163 aa23.8■■□□□ 1.4
NDEL1-201ENST00000334527 SAT1P21673 171 aa23.8■■□□□ 1.4
NDEL1-201ENST00000334527 SP100P23497 879 aaPredicted RBP23.8■■□□□ 1.4
NDEL1-201ENST00000334527 ZNF135P52742 658 aaPredicted RBP23.8■■□□□ 1.4
NDEL1-201ENST00000334527 DSG1Q02413 1049 aa23.8■■□□□ 1.4
NDEL1-201ENST00000334527 MORN1Q5T089 497 aa23.8■■□□□ 1.4
NDEL1-201ENST00000334527 ZSCAN18Q8TBC5 510 aaPredicted RBP23.8■■□□□ 1.4
NDEL1-201ENST00000334527 PYDC1Q8WXC3 89 aa23.8■■□□□ 1.4
NDEL1-201ENST00000334527 KATNAL1Q9BW62 490 aa23.8■■□□□ 1.4
NDEL1-201ENST00000334527 GATA5Q9BWX5 397 aaPredicted RBP23.8■■□□□ 1.4
NDEL1-201ENST00000334527 TASP1Q9H6P5 420 aa23.8■■□□□ 1.4
NDEL1-201ENST00000334527 FAM105AQ9NUU6 356 aa23.8■■□□□ 1.4
NDEL1-201ENST00000334527 MIOSQ9NXC5 875 aa23.8■■□□□ 1.4
NDEL1-201ENST00000334527 SCOCQ9UIL1 159 aa23.8■■□□□ 1.4
NDEL1-201ENST00000334527 ZMPSTE24O75844 475 aa23.8■■□□□ 1.4
NDEL1-201ENST00000334527 CCL14Q16627 93 aa23.8■■□□□ 1.4
NDEL1-201ENST00000334527 ANO4Q32M45 955 aa23.8■■□□□ 1.4
NDEL1-201ENST00000334527 PGM2L1Q6PCE3 622 aa23.8■■□□□ 1.4
NDEL1-201ENST00000334527 DEFB107AQ8IZN7 70 aa23.8■■□□□ 1.4
NDEL1-201ENST00000334527 CCDC124Q96CT7 223 aaKnown RBP23.8■■□□□ 1.4
NDEL1-201ENST00000334527 ACE2Q9BYF1 805 aaPredicted RBP23.8■■□□□ 1.4
NDEL1-201ENST00000334527 YIPF3Q9GZM5 350 aa23.8■■□□□ 1.4
NDEL1-201ENST00000334527 OXSMQ9NWU1 459 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms