RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 LRRC40Q9H9A6 602 aa17.22■□□□□ 0.35
RTN1-201ENST00000267484 DDX18Q9NVP1 670 aaKnown RBP17.22■□□□□ 0.35
RTN1-201ENST00000267484 LZTS1Q9Y250 596 aa17.22■□□□□ 0.35
RTN1-201ENST00000267484 AP4B1Q9Y6B7 739 aa17.22■□□□□ 0.35
RTN1-201ENST00000267484 PAPPA2Q9BXP8 1791 aa17.22■□□□□ 0.35
RTN1-201ENST00000267484 NMBRP28336 390 aa17.22■□□□□ 0.35
RTN1-201ENST00000267484 GLUD2P49448 558 aa17.22■□□□□ 0.35
RTN1-201ENST00000267484 SLC26A2P50443 739 aa17.22■□□□□ 0.35
RTN1-201ENST00000267484 CDKL1Q00532 357 aa17.22■□□□□ 0.35
RTN1-201ENST00000267484 MPP3Q13368 585 aa17.22■□□□□ 0.35
RTN1-201ENST00000267484 KCNMB4Q86W47 210 aa17.22■□□□□ 0.35
RTN1-201ENST00000267484 SNX31Q8N9S9 440 aa17.22■□□□□ 0.35
RTN1-201ENST00000267484 KCTD4Q8WVF5 259 aa17.22■□□□□ 0.35
RTN1-201ENST00000267484 SGF29Q96ES7 293 aa17.22■□□□□ 0.35
RTN1-201ENST00000267484 FERMT1Q9BQL6 677 aa17.22■□□□□ 0.35
RTN1-201ENST00000267484 SUDS3Q9H7L9 328 aaPredicted RBP17.22■□□□□ 0.35
RTN1-201ENST00000267484 EIF2B3Q9NR50 452 aaKnown RBP17.22■□□□□ 0.35
RTN1-201ENST00000267484 RBPJLQ9UBG7 517 aa17.22■□□□□ 0.35
RTN1-201ENST00000267484 TRPA1O75762 1119 aa17.22■□□□□ 0.35
RTN1-201ENST00000267484 SBK3P0C264 359 aa17.22■□□□□ 0.35
RTN1-201ENST00000267484 BAG6P46379 1132 aa17.22■□□□□ 0.35
RTN1-201ENST00000267484 ARHGAP1Q07960 439 aa17.22■□□□□ 0.35
RTN1-201ENST00000267484 TTLL4Q14679 1199 aa17.22■□□□□ 0.35
RTN1-201ENST00000267484 SLC25A52Q3SY17 297 aa17.22■□□□□ 0.35
RTN1-201ENST00000267484 BNC2Q6ZN30 1099 aaPredicted RBP17.22■□□□□ 0.35
RTN1-201ENST00000267484 DEFB132Q7Z7B7 95 aa17.22■□□□□ 0.35
RTN1-201ENST00000267484 NPWQ8N729 165 aa17.22■□□□□ 0.35
RTN1-201ENST00000267484 APBA2Q99767 749 aa17.22■□□□□ 0.35
RTN1-201ENST00000267484 PKP2Q99959 881 aa17.22■□□□□ 0.35
RTN1-201ENST00000267484 BFARQ9NZS9 450 aa17.22■□□□□ 0.35
RTN1-201ENST00000267484 CACNG4Q9UBN1 327 aa17.22■□□□□ 0.35
RTN1-201ENST00000267484 MATN2O00339 956 aa17.21■□□□□ 0.35
RTN1-201ENST00000267484 STAU1O95793 577 aaKnown RBP17.21■□□□□ 0.35
RTN1-201ENST00000267484 ERCC2P18074 760 aa17.21■□□□□ 0.35
RTN1-201ENST00000267484 NELFEP18615 380 aaKnown RBP17.21■□□□□ 0.35
RTN1-201ENST00000267484 TFEBP19484 476 aa17.21■□□□□ 0.35
RTN1-201ENST00000267484 MAGEA12P43365 314 aa17.21■□□□□ 0.35
RTN1-201ENST00000267484 NOL9Q5SY16 702 aaKnown RBP17.21■□□□□ 0.35
RTN1-201ENST00000267484 CLEC14AQ86T13 490 aa17.21■□□□□ 0.35
RTN1-201ENST00000267484 PRPF18Q99633 342 aaKnown RBP17.21■□□□□ 0.35
RTN1-201ENST00000267484 NAT9Q9BTE0 207 aa17.21■□□□□ 0.35
RTN1-201ENST00000267484 MLPHQ9BV36 600 aaPredicted RBP17.21■□□□□ 0.35
RTN1-201ENST00000267484 OXSMQ9NWU1 459 aa17.21■□□□□ 0.35
RTN1-201ENST00000267484 GTF2IRD1Q9UHL9 959 aa17.21■□□□□ 0.35
RTN1-201ENST00000267484 VILLO15195 856 aa17.21■□□□□ 0.35
RTN1-201ENST00000267484 GRID2O43424 1007 aa17.21■□□□□ 0.35
RTN1-201ENST00000267484 THRAP10827 490 aa17.21■□□□□ 0.35
RTN1-201ENST00000267484 CD68P34810 354 aaPredicted RBP17.21■□□□□ 0.35
RTN1-201ENST00000267484 GRM5P41594 1212 aa17.21■□□□□ 0.35
RTN1-201ENST00000267484 ZBTB17Q13105 803 aa17.21■□□□□ 0.35
RTN1-201ENST00000267484 CYLC2Q14093 348 aaPredicted RBP17.21■□□□□ 0.35
RTN1-201ENST00000267484 ZNF423Q2M1K9 1284 aa17.21■□□□□ 0.35
RTN1-201ENST00000267484 NADK2Q4G0N4 442 aa17.21■□□□□ 0.35
RTN1-201ENST00000267484 ZNF484Q5JVG2 852 aa17.21■□□□□ 0.35
RTN1-201ENST00000267484 C9orf57Q5W0N0 161 aa17.21■□□□□ 0.35
RTN1-201ENST00000267484 SEL1L3Q68CR1 1132 aa17.21■□□□□ 0.35
RTN1-201ENST00000267484 ARHGAP17Q68EM7 881 aa17.21■□□□□ 0.35
RTN1-201ENST00000267484 STRADAQ7RTN6 431 aa17.21■□□□□ 0.35
RTN1-201ENST00000267484 TTC39CQ8N584 583 aa17.21■□□□□ 0.35
RTN1-201ENST00000267484 LINC01465Q8N7H1 131 aa17.21■□□□□ 0.35
RTN1-201ENST00000267484 CCNYL1Q8N7R7 359 aa17.21■□□□□ 0.35
RTN1-201ENST00000267484 USP33Q8TEY7 942 aa17.21■□□□□ 0.35
RTN1-201ENST00000267484 KLHL32Q96NJ5 620 aa17.21■□□□□ 0.35
RTN1-201ENST00000267484 LOC285556D6RIA3 1793 aa17.21■□□□□ 0.35
RTN1-201ENST00000267484 RGSL1A5PLK6 1076 aa17.21■□□□□ 0.34
RTN1-201ENST00000267484 KPNA7A9QM74 516 aa17.21■□□□□ 0.34
RTN1-201ENST00000267484 CLPTM1O96005 669 aa17.21■□□□□ 0.34
RTN1-201ENST00000267484 SRGAP2BP0DMP2 458 aa17.21■□□□□ 0.34
RTN1-201ENST00000267484 HOXA11P31270 313 aaPredicted RBP17.21■□□□□ 0.34
RTN1-201ENST00000267484 EGFL6Q8IUX8 553 aa17.21■□□□□ 0.34
RTN1-201ENST00000267484 PSTKQ8IV42 348 aaKnown RBP17.21■□□□□ 0.34
RTN1-201ENST00000267484 OPTNQ96CV9 577 aa17.21■□□□□ 0.34
RTN1-201ENST00000267484 CCDC28BQ9BUN5 200 aa17.21■□□□□ 0.34
RTN1-201ENST00000267484 SEMA6AQ9H2E6 1030 aa17.21■□□□□ 0.34
RTN1-201ENST00000267484 INHBCP55103 352 aa17.2■□□□□ 0.34
RTN1-201ENST00000267484 SNX16P57768 344 aa17.2■□□□□ 0.34
RTN1-201ENST00000267484 MYBPC1Q00872 1141 aa17.2■□□□□ 0.34
RTN1-201ENST00000267484 NAB1Q13506 487 aa17.2■□□□□ 0.34
RTN1-201ENST00000267484 TMEM135Q86UB9 458 aa17.2■□□□□ 0.34
RTN1-201ENST00000267484 PNPLA1Q8N8W4 532 aa17.2■□□□□ 0.34
RTN1-201ENST00000267484 PRICKLE1Q96MT3 831 aaPredicted RBP17.2■□□□□ 0.34
RTN1-201ENST00000267484 SNX25Q9H3E2 840 aa17.2■□□□□ 0.34
RTN1-201ENST00000267484 GNEQ9Y223 722 aaKnown RBP17.2■□□□□ 0.34
RTN1-201ENST00000267484 hCG_2014768A0A024R1R8 64 aa17.2■□□□□ 0.34
RTN1-201ENST00000267484 HDAC3O15379 428 aa17.2■□□□□ 0.34
RTN1-201ENST00000267484 PYGLP06737 847 aa17.2■□□□□ 0.34
RTN1-201ENST00000267484 NFKB1P19838 968 aa17.2■□□□□ 0.34
RTN1-201ENST00000267484 RPL14P50914 215 aaKnown RBP17.2■□□□□ 0.34
RTN1-201ENST00000267484 XIAPP98170 497 aa17.2■□□□□ 0.34
RTN1-201ENST00000267484 PIGGQ5H8A4 983 aa17.2■□□□□ 0.34
RTN1-201ENST00000267484 POTEAQ6S8J7 498 aa17.2■□□□□ 0.34
RTN1-201ENST00000267484 RPS27LQ71UM5 84 aaKnown RBP17.2■□□□□ 0.34
RTN1-201ENST00000267484 SLC7A14Q8TBB6 771 aa17.2■□□□□ 0.34
RTN1-201ENST00000267484 BTBD9Q96Q07 612 aa17.2■□□□□ 0.34
RTN1-201ENST00000267484 WDR41Q9HAD4 459 aa17.2■□□□□ 0.34
RTN1-201ENST00000267484 IGSF9Q9P2J2 1179 aa17.2■□□□□ 0.34
RTN1-201ENST00000267484 RUVBL2Q9Y230 463 aaKnown RBP17.2■□□□□ 0.34
RTN1-201ENST00000267484 SLC4A7Q9Y6M7 1214 aa17.2■□□□□ 0.34
RTN1-201ENST00000267484 PEX1O43933 1283 aa17.19■□□□□ 0.34
RTN1-201ENST00000267484 RECQL4O94761 1208 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms