RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Ophn1Q99J31 802 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Aco2Q99KI0 780 aaKnown RBP8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Mrps17Q9CQE3 120 aaKnown RBP8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Alg14Q9D081 217 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Q9D1F3 157 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Q9D979 236 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Olfr703Q9EPF5 319 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Rad9aQ9Z0F6 389 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Gm16430A6X8J1 155 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Dusp8O09112 663 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Adcy1O88444 1118 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Eno1P17182 434 aaKnown RBP8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Uhmk1P97343 419 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 IdsQ08890 552 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Gpd1lQ3ULJ0 351 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Hepacam2Q4VAH7 463 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Trcg1Q58Y74 825 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 HrQ61645 1182 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Ankrd6Q69ZU8 712 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Ggnbp1Q6K1E7 370 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Ric8bQ80XE1 520 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 L3mbtl3Q8BLB7 883 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Rassf2Q8BMS9 326 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Plekhs1Q8BW88 474 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Usp27Q8CEG8 438 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Kremen2Q8K1S7 461 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Uhrf1Q8VDF2 782 aaKnown RBP8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Sec14l2Q99J08 403 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Yaf2Q99LW6 179 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Armc9Q9D2I5 817 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Slxl1Q9D515 155 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Calr3Q9D9Q6 380 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Tmem174Q9DCX7 243 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Plod1Q9R0E2 728 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Ankfn1A0A140LIW7 1083 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Gm21964A0A1W2P7S4 437 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Gm7073E9QAS1 335 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 MaptP10637 733 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Gsta4P24472 222 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Upp1P52624 311 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 AdprhP54923 362 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Surf6P70279 355 aaKnown RBP8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Irx2P81066 474 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Zbtb14Q08376 449 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Tex35Q14BK3 207 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Kctd16Q5DTY9 427 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 MafkQ61827 156 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Ptpn14Q62130 1189 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Nuak1Q641K5 658 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Wdr44Q6NVE8 915 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Znf280cQ6P3Y5 742 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Parp6Q6P6P7 630 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Hmgb4Q6P8W9 181 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Stambpl1Q76N33 436 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Rfx6Q8C7R7 927 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Slc36a1Q8K4D3 475 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Olfr697Q8VFM4 317 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 MgarpQ8VI64 283 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Oas1dQ8VI95 361 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Gprc5bQ923Z0 410 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Cyp2c55Q9D816 490 aa8.89□□□□□ -0.99
Trim39-201ENSMUST00000042717 Plxna4Q80UG2 1893 aa8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 Olfr271-ps1A0A1L1SQH2 283 aa8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 Nhsl2B1AXH1 854 aa8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 Fbxl18E9PYR1 771 aa8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 Ifi206G3UZV2 921 aa8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 Ap3d1O54774 1199 aa8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 Tap1P21958 724 aa8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 Wnt3aP27467 352 aa8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 Gdf5P43027 495 aa8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 Ppp3ccP48455 513 aa8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 Neurog1P70660 244 aa8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 Trappc9Q3U0M1 1148 aa8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 Zfp217Q3U0X6 1041 aa8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 Serpinb6dQ3UWK8 375 aa8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 Bdkrb1Q61125 334 aa8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 Znf148Q61624 794 aa8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 Nlrp4fQ66X05 959 aa8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 Gpr17Q6NS65 339 aa8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 Tarsl2Q8BLY2 790 aa8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 Iffo1Q8BXL9 562 aa8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 Zc2hc1cQ8CCG1 527 aa8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 Tbc1d14Q8CGA2 694 aa8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 Sh2d5Q8JZW5 429 aa8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 Gtse1Q8R080 741 aa8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 Vps37bQ8R0J7 285 aa8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 SardhQ99LB7 919 aa8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 Ogfod2Q9CQ04 349 aa8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 Lysmd1Q9D0E3 226 aa8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 Mfsd10Q9D2V8 456 aaKnown RBP8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 Sf3a3Q9D554 501 aaKnown RBP8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 Tk2Q9R088 270 aa8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 Pld1Q9Z280 1074 aa8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 Rp1P56716 2095 aa8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 Bfsp1A2AMT1 669 aa8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 Gm1141B9EJU1 475 aa8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 Hsf3D0VYS2 492 aa8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 Gm5415E9PXF3 478 aa8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 H2-T24F8VQG4 363 aa8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 Ring1O35730 406 aa8.88□□□□□ -0.99
Retrieved 100 of 22,080 RNA–protein pairs in 27.2 ms