RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Gata6Q61169 589 aa11.52□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Xpo1Q6P5F9 1071 aaKnown RBP11.52□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Olfr1415Q7TQS4 311 aa11.52□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Gpr150Q8BL07 427 aa11.52□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Zswim3Q8CFL8 695 aa11.52□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Aqp12Q8CHJ2 290 aa11.52□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Retreg1dQ8VE91 480 aa11.52□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Olfr1416Q8VGU4 312 aa11.52□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Pkp2Q9CQ73 795 aaKnown RBP11.52□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Sh2d4aQ9D7V1 421 aa11.52□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Rhobtb1Q9DAK3 695 aa11.52□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Gpc1Q9QZF2 557 aa11.52□□□□□ -0.57
Topbp1-201ENSMUST00000035164 ClcnkbQ9WUB6 687 aa11.52□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Nup98Q6PFD9 1816 aaKnown RBP11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Cops5O35864 334 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 MafgO54790 162 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Pou4f1P17208 421 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Gjb3P28231 270 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Wnt10bP48614 389 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Epb41l5Q8BGS1 731 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Pgm5Q8BZF8 567 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Pramef20B1ARV6 477 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 FgaE9PV24 789 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Gnao1P18872 354 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Grin2cQ01098 1239 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Sox8Q04886 464 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Slc45a4Q0P5V9 785 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Ggnbp1Q6K1E7 370 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Cyp2r1Q6VVW9 501 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 IrgcQ8C262 412 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Prpf39Q8K2Z2 665 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 1700080O16RikQ9D9G4 284 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Dclre1aQ9JIC3 1026 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Grin3aA2AIR5 1135 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Rhox3fA2ANE1 215 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Gm17175E9Q528 179 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 AladP10518 330 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 InhbcP55104 352 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Psg28Q4KL66 472 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Mapkap1Q8BKH7 522 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Tmem260Q8BMD6 703 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Kct2Q8K201 259 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Hkdc1Q91W97 915 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Smim11aQ99J19 55 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Lysmd3Q99LE3 305 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Slc12a9Q99MR3 914 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Q9D4A5 307 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Cldn22Q9D7U6 220 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Gsdmdc1Q9D8T2 487 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Mettl7bQ9DD20 244 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Capn10Q9ESK3 666 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Fads3Q9JJE7 449 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Sh3glb1Q9JK48 365 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 CtsmQ9JL96 333 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Usp21Q9QZL6 566 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Akap8lQ9R0L7 642 aaKnown RBP11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Gm43518A0A0G2JGB6 165 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Vmn1r2A2AMT6 306 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Vmn1r3A2AMT7 306 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 LtfP08071 707 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Cap1P40124 474 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Plppr4Q7TME0 766 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Mapk15Q80Y86 549 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Lrrc8dQ8BGR2 859 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Cept1Q8BGS7 416 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Erich5Q8K0S2 362 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Vmn1r79Q8R285 306 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Vps11Q91W86 941 aaKnown RBP11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Dus2Q9D7B1 493 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Eef1akmt2Q9D853 244 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Tbc1d21Q9D9D3 336 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Atp13a1Q9EPE9 1200 aaKnown RBP11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Ccdc86Q9JJ89 426 aa11.51□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Gm3147A0A0J9YU88 481 aa11.5□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Gm6205E9PZS2 359 aa11.5□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Gm3636E9Q5P1 227 aa11.5□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Spata31E9QAF0 1014 aa11.5□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Vmn1r39G3UWE6 305 aa11.5□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Zfp715G3X9T1 886 aa11.5□□□□□ -0.57
Topbp1-201ENSMUST00000035164 RapsnP12672 412 aa11.5□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Q3KNL4 93 aa11.5□□□□□ -0.57
Topbp1-201ENSMUST00000035164 HexdcQ3U4H6 486 aa11.5□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Olfr23Q7TRX4 325 aa11.5□□□□□ -0.57
Topbp1-201ENSMUST00000035164 ItpkcQ7TS72 678 aa11.5□□□□□ -0.57
Topbp1-201ENSMUST00000035164 UstQ8BUB6 407 aa11.5□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Gm6367Q8C6L9 287 aa11.5□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Cys1Q8R4T1 145 aa11.5□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Mmp19Q9JHI0 527 aa11.5□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Hsd17b14E9Q3D4 273 aa11.5□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Gm8909G3UXE9 396 aa11.5□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Hoxc10P31257 342 aa11.5□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Mief2Q5NCS9 454 aa11.5□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Tbc1d12Q6A039 696 aa11.5□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Znf821Q6PD05 413 aa11.5□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Armc12Q80X86 340 aa11.5□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Rap2cQ8BU31 183 aa11.5□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Bri3bpQ8BXV2 253 aa11.5□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Kctd12bQ8C7J6 292 aa11.5□□□□□ -0.57
Topbp1-201ENSMUST00000035164 MafaQ8CF90 359 aa11.5□□□□□ -0.57
Topbp1-201ENSMUST00000035164 C8aQ8K182 587 aa11.5□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 28.1 ms