RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-222ENST00000600517 SYT12Q8IV01 421 aa13.83□□□□□ -0.2
ARHGEF1-222ENST00000600517 SLC41A1Q8IVJ1 513 aa13.83□□□□□ -0.2
ARHGEF1-222ENST00000600517 DRC7Q8IY82 874 aa13.83□□□□□ -0.2
ARHGEF1-222ENST00000600517 DEFB119Q8N690 84 aa13.83□□□□□ -0.2
ARHGEF1-222ENST00000600517 CCDC185Q8N715 623 aa13.83□□□□□ -0.2
ARHGEF1-222ENST00000600517 CADM4Q8NFZ8 388 aa13.83□□□□□ -0.2
ARHGEF1-222ENST00000600517 FRS2Q8WU20 508 aa13.83□□□□□ -0.2
ARHGEF1-222ENST00000600517 PIGKQ92643 395 aa13.83□□□□□ -0.2
ARHGEF1-222ENST00000600517 PTPRN2Q92932 1015 aa13.83□□□□□ -0.2
ARHGEF1-222ENST00000600517 TOE1Q96GM8 510 aaKnown RBP13.83□□□□□ -0.2
ARHGEF1-222ENST00000600517 FAM129BQ96TA1 746 aa13.83□□□□□ -0.2
ARHGEF1-222ENST00000600517 MUC3BQ9H195 1237 aa13.83□□□□□ -0.2
ARHGEF1-222ENST00000600517 SMOC1Q9H4F8 434 aa13.83□□□□□ -0.2
ARHGEF1-222ENST00000600517 TMEM74BQ9NUR3 256 aa13.83□□□□□ -0.2
ARHGEF1-222ENST00000600517 ADAMTS1Q9UHI8 967 aa13.83□□□□□ -0.2
ARHGEF1-222ENST00000600517 PILRBQ9UKJ0 227 aa13.83□□□□□ -0.2
ARHGEF1-222ENST00000600517 MUC22E2RYF6 1773 aaPredicted RBP13.83□□□□□ -0.2
ARHGEF1-222ENST00000600517 SPAG17Q6Q759 2223 aa13.83□□□□□ -0.2
ARHGEF1-222ENST00000600517 DMXL1Q9Y485 3027 aa13.82□□□□□ -0.2
ARHGEF1-222ENST00000600517 A0A0D9SEW6 157 aa13.82□□□□□ -0.2
ARHGEF1-222ENST00000600517 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.82□□□□□ -0.2
ARHGEF1-222ENST00000600517 KHNYNO15037 678 aaKnown RBP13.82□□□□□ -0.2
ARHGEF1-222ENST00000600517 GDF9O60383 454 aa13.82□□□□□ -0.2
ARHGEF1-222ENST00000600517 RNASEH1O60930 286 aaKnown RBP13.82□□□□□ -0.2
ARHGEF1-222ENST00000600517 DNTTP04053 509 aa13.82□□□□□ -0.2
ARHGEF1-222ENST00000600517 MYBL1P10243 752 aa13.82□□□□□ -0.2
ARHGEF1-222ENST00000600517 RHOQP17081 205 aa13.82□□□□□ -0.2
ARHGEF1-222ENST00000600517 ITPKAP23677 461 aa13.82□□□□□ -0.2
ARHGEF1-222ENST00000600517 HNRNPH3P31942 346 aaKnown RBP13.82□□□□□ -0.2
ARHGEF1-222ENST00000600517 HOXD12P35452 270 aa13.82□□□□□ -0.2
ARHGEF1-222ENST00000600517 NUMBP49757 651 aa13.82□□□□□ -0.2
ARHGEF1-222ENST00000600517 KRT83P78385 493 aa13.82□□□□□ -0.2
ARHGEF1-222ENST00000600517 RSPO4Q2I0M5 234 aaPredicted RBP13.82□□□□□ -0.2
ARHGEF1-222ENST00000600517 TDRD12Q587J7 1177 aaKnown RBP13.82□□□□□ -0.2
ARHGEF1-222ENST00000600517 PEAR1Q5VY43 1037 aaPredicted RBP13.82□□□□□ -0.2
ARHGEF1-222ENST00000600517 ZNF776Q68DI1 518 aaPredicted RBP13.82□□□□□ -0.2
ARHGEF1-222ENST00000600517 SPECC1LQ69YQ0 1117 aa13.82□□□□□ -0.2
ARHGEF1-222ENST00000600517 SCYL2Q6P3W7 929 aa13.82□□□□□ -0.2
ARHGEF1-222ENST00000600517 TMC6Q7Z403 805 aa13.82□□□□□ -0.2
ARHGEF1-222ENST00000600517 VPS36Q86VN1 386 aa13.82□□□□□ -0.2
ARHGEF1-222ENST00000600517 C12orf50Q8NA57 414 aaPredicted RBP13.82□□□□□ -0.2
ARHGEF1-222ENST00000600517 NETO1Q8TDF5 533 aa13.82□□□□□ -0.2
ARHGEF1-222ENST00000600517 FOXJ1Q92949 421 aa13.82□□□□□ -0.2
ARHGEF1-222ENST00000600517 TRIM11Q96F44 468 aa13.82□□□□□ -0.2
ARHGEF1-222ENST00000600517 PSMB7Q99436 277 aa13.82□□□□□ -0.2
ARHGEF1-222ENST00000600517 C2orf49Q9BVC5 232 aaPredicted RBP13.82□□□□□ -0.2
ARHGEF1-222ENST00000600517 CNOT8Q9UFF9 292 aaKnown RBP13.82□□□□□ -0.2
ARHGEF1-222ENST00000600517 EVLQ9UI08 416 aaPredicted RBP13.82□□□□□ -0.2
ARHGEF1-222ENST00000600517 SLC25A13Q9UJS0 675 aa13.82□□□□□ -0.2
ARHGEF1-222ENST00000600517 SCML1Q9UN30 329 aa13.82□□□□□ -0.2
ARHGEF1-222ENST00000600517 HS3ST2Q9Y278 367 aa13.82□□□□□ -0.2
ARHGEF1-222ENST00000600517 ATMINO43313 823 aaPredicted RBP13.81□□□□□ -0.2
ARHGEF1-222ENST00000600517 LRIG2O94898 1065 aa13.81□□□□□ -0.2
ARHGEF1-222ENST00000600517 L1CAMP32004 1257 aa13.81□□□□□ -0.2
ARHGEF1-222ENST00000600517 AIF1P55008 147 aa13.81□□□□□ -0.2
ARHGEF1-222ENST00000600517 GNA12Q03113 381 aa13.81□□□□□ -0.2
ARHGEF1-222ENST00000600517 SFSWAPQ12872 951 aaKnown RBP13.81□□□□□ -0.2
ARHGEF1-222ENST00000600517 PUM1Q14671 1186 aaKnown RBP eCLIP13.81□□□□□ -0.24e-7■■■■■ 29.1
ARHGEF1-222ENST00000600517 DLG2Q15700 870 aa13.81□□□□□ -0.2
ARHGEF1-222ENST00000600517 TCEAL6Q6IPX3 200 aa13.81□□□□□ -0.2
ARHGEF1-222ENST00000600517 RWDD4Q6NW29 188 aaKnown RBP13.81□□□□□ -0.2
ARHGEF1-222ENST00000600517 USP30Q70CQ3 517 aa13.81□□□□□ -0.2
ARHGEF1-222ENST00000600517 NLRP14Q86W24 1093 aa13.81□□□□□ -0.2
ARHGEF1-222ENST00000600517 CACUL1Q86Y37 369 aa13.81□□□□□ -0.2
ARHGEF1-222ENST00000600517 SH2D3CQ8N5H7 860 aa13.81□□□□□ -0.2
ARHGEF1-222ENST00000600517 DCAF4L2Q8NA75 395 aa13.81□□□□□ -0.2
ARHGEF1-222ENST00000600517 RNF214Q8ND24 703 aa13.81□□□□□ -0.2
ARHGEF1-222ENST00000600517 FNIP1Q8TF40 1166 aa13.81□□□□□ -0.2
ARHGEF1-222ENST00000600517 TCEAL3Q969E4 200 aa13.81□□□□□ -0.2
ARHGEF1-222ENST00000600517 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.81□□□□□ -0.2
ARHGEF1-222ENST00000600517 GPR174Q9BXC1 333 aa13.81□□□□□ -0.2
ARHGEF1-222ENST00000600517 PCED1AQ9H1Q7 454 aa13.81□□□□□ -0.2
ARHGEF1-222ENST00000600517 PABPC3Q9H361 631 aaKnown RBP13.81□□□□□ -0.2
ARHGEF1-222ENST00000600517 MRPL47Q9HD33 250 aaKnown RBP13.81□□□□□ -0.2
ARHGEF1-222ENST00000600517 RXFP3Q9NSD7 469 aa13.81□□□□□ -0.2
ARHGEF1-222ENST00000600517 TMEM248Q9NWD8 314 aa13.81□□□□□ -0.2
ARHGEF1-222ENST00000600517 VPS51Q9UID3 782 aa13.81□□□□□ -0.2
ARHGEF1-222ENST00000600517 FZD10Q9ULW2 581 aa13.81□□□□□ -0.2
ARHGEF1-222ENST00000600517 NEU3Q9UQ49 428 aa13.81□□□□□ -0.2
ARHGEF1-222ENST00000600517 SCINQ9Y6U3 715 aa13.81□□□□□ -0.2
ARHGEF1-222ENST00000600517 CKAP5Q14008 2032 aa13.81□□□□□ -0.2
ARHGEF1-222ENST00000600517 PLXND1Q9Y4D7 1925 aa13.8□□□□□ -0.2
ARHGEF1-222ENST00000600517 CACNA1AO00555 2505 aa13.8□□□□□ -0.2
ARHGEF1-222ENST00000600517 A0A087X0T9 212 aa13.8□□□□□ -0.2
ARHGEF1-222ENST00000600517 METTL12A8MUP2 240 aa13.8□□□□□ -0.2
ARHGEF1-222ENST00000600517 PATE3B3GLJ2 98 aa13.8□□□□□ -0.2
ARHGEF1-222ENST00000600517 SNAP91O60641 907 aa13.8□□□□□ -0.2
ARHGEF1-222ENST00000600517 ZMPSTE24O75844 475 aa13.8□□□□□ -0.2
ARHGEF1-222ENST00000600517 MT-CO1P00395 513 aa13.8□□□□□ -0.2
ARHGEF1-222ENST00000600517 FAM228BP0C875 321 aa13.8□□□□□ -0.2
ARHGEF1-222ENST00000600517 SRCP12931 536 aa13.8□□□□□ -0.2
ARHGEF1-222ENST00000600517 VAV1P15498 845 aa13.8□□□□□ -0.2
ARHGEF1-222ENST00000600517 DESP17661 470 aa13.8□□□□□ -0.2
ARHGEF1-222ENST00000600517 PSMA2P25787 234 aa13.8□□□□□ -0.2
ARHGEF1-222ENST00000600517 SLC8A1P32418 973 aa13.8□□□□□ -0.2
ARHGEF1-222ENST00000600517 ACSL1P33121 698 aa13.8□□□□□ -0.2
ARHGEF1-222ENST00000600517 MAPKAPK2P49137 400 aa13.8□□□□□ -0.2
ARHGEF1-222ENST00000600517 LIMK1P53667 647 aa13.8□□□□□ -0.2
ARHGEF1-222ENST00000600517 SLC20A2Q08357 652 aa13.8□□□□□ -0.2
ARHGEF1-222ENST00000600517 ELAVL3Q14576 367 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms