RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 GNA12Q03113 381 aa10.01□□□□□ -0.81
SMARCD1-206ENST00000549274 MLF2Q15773 248 aaPredicted RBP10.01□□□□□ -0.81
SMARCD1-206ENST00000549274 WHAMMP3Q1A5X7 153 aa10.01□□□□□ -0.81
SMARCD1-206ENST00000549274 NCBP2-AS2Q69YL0 99 aa10.01□□□□□ -0.81
SMARCD1-206ENST00000549274 TRIM68Q6AZZ1 485 aa10.01□□□□□ -0.81
SMARCD1-206ENST00000549274 ZNF852Q6ZMS4 543 aa10.01□□□□□ -0.81
SMARCD1-206ENST00000549274 TFAP2DQ7Z6R9 452 aa10.01□□□□□ -0.81
SMARCD1-206ENST00000549274 ZNF354CQ86Y25 554 aa10.01□□□□□ -0.81
SMARCD1-206ENST00000549274 CPNE8Q86YQ8 564 aa10.01□□□□□ -0.81
SMARCD1-206ENST00000549274 SLC13A5Q86YT5 568 aaPredicted RBP10.01□□□□□ -0.81
SMARCD1-206ENST00000549274 RNF135Q8IUD6 432 aa10.01□□□□□ -0.81
SMARCD1-206ENST00000549274 CDKL3Q8IVW4 592 aaPredicted RBP10.01□□□□□ -0.81
SMARCD1-206ENST00000549274 CFAP52Q8N1V2 620 aa10.01□□□□□ -0.81
SMARCD1-206ENST00000549274 ATPAF2Q8N5M1 289 aa10.01□□□□□ -0.81
SMARCD1-206ENST00000549274 PLD5Q8N7P1 536 aa10.01□□□□□ -0.81
SMARCD1-206ENST00000549274 TERB1Q8NA31 727 aa10.01□□□□□ -0.81
SMARCD1-206ENST00000549274 RSAD2Q8WXG1 361 aa10.01□□□□□ -0.81
SMARCD1-206ENST00000549274 HDAC11Q96DB2 347 aa10.01□□□□□ -0.81
SMARCD1-206ENST00000549274 ZFYVE19Q96K21 471 aa10.01□□□□□ -0.81
SMARCD1-206ENST00000549274 PPP1R2P1Q96PQ5 205 aa10.01□□□□□ -0.81
SMARCD1-206ENST00000549274 P2RY13Q9BPV8 354 aa10.01□□□□□ -0.81
SMARCD1-206ENST00000549274 IER2Q9BTL4 223 aa10.01□□□□□ -0.81
SMARCD1-206ENST00000549274 FAM117AQ9C073 453 aa10.01□□□□□ -0.81
SMARCD1-206ENST00000549274 SP110Q9HB58 689 aa10.01□□□□□ -0.81
SMARCD1-206ENST00000549274 TMPRSS4Q9NRS4 437 aa10.01□□□□□ -0.81
SMARCD1-206ENST00000549274 MPP6Q9NZW5 540 aa10.01□□□□□ -0.81
SMARCD1-206ENST00000549274 GGA2Q9UJY4 613 aa10.01□□□□□ -0.81
SMARCD1-206ENST00000549274 VPS28Q9UK41 221 aa10.01□□□□□ -0.81
SMARCD1-206ENST00000549274 FBXL21Q9UKT6 434 aa10.01□□□□□ -0.81
SMARCD1-206ENST00000549274 NEU3Q9UQ49 428 aa10.01□□□□□ -0.81
SMARCD1-206ENST00000549274 SNX10Q9Y5X0 201 aa10.01□□□□□ -0.81
SMARCD1-206ENST00000549274 PIAS3Q9Y6X2 628 aa10.01□□□□□ -0.81
SMARCD1-206ENST00000549274 MIA3Q5JRA6 1907 aa10.01□□□□□ -0.81
SMARCD1-206ENST00000549274 COL4A2P08572 1712 aa10□□□□□ -0.81
SMARCD1-206ENST00000549274 CCDC188H7C350 402 aa10□□□□□ -0.81
SMARCD1-206ENST00000549274 SCAMP3O14828 347 aaKnown RBP10□□□□□ -0.81
SMARCD1-206ENST00000549274 NEBLO76041 1014 aa10□□□□□ -0.81
SMARCD1-206ENST00000549274 CNTN5O94779 1100 aa10□□□□□ -0.81
SMARCD1-206ENST00000549274 FGGP02679 453 aa10□□□□□ -0.81
SMARCD1-206ENST00000549274 ASGR2P07307 311 aa10□□□□□ -0.81
SMARCD1-206ENST00000549274 SRPRAP08240 638 aaKnown RBP10□□□□□ -0.81
SMARCD1-206ENST00000549274 CD48P09326 243 aa10□□□□□ -0.81
SMARCD1-206ENST00000549274 CCNCP24863 283 aa10□□□□□ -0.81
SMARCD1-206ENST00000549274 ACTN2P35609 894 aa10□□□□□ -0.81
SMARCD1-206ENST00000549274 HSPA9P38646 679 aaKnown RBP10□□□□□ -0.81
SMARCD1-206ENST00000549274 MAGEA9P43362 315 aa10□□□□□ -0.81
SMARCD1-206ENST00000549274 ST8SIA6P61647 398 aa10□□□□□ -0.81
SMARCD1-206ENST00000549274 TNK2Q07912 1038 aa10□□□□□ -0.81
SMARCD1-206ENST00000549274 GALNT2Q10471 571 aa10□□□□□ -0.81
SMARCD1-206ENST00000549274 MMRN1Q13201 1228 aa10□□□□□ -0.81
SMARCD1-206ENST00000549274 KLF1Q13351 362 aaPredicted RBP10□□□□□ -0.81
SMARCD1-206ENST00000549274 LRRC32Q14392 662 aa10□□□□□ -0.81
SMARCD1-206ENST00000549274 NOMO1Q15155 1222 aa10□□□□□ -0.81
SMARCD1-206ENST00000549274 PLEKHG6Q3KR16 790 aa10□□□□□ -0.81
SMARCD1-206ENST00000549274 SLC44A4Q53GD3 710 aa10□□□□□ -0.81
SMARCD1-206ENST00000549274 ALFQ53S48 1182 aa10□□□□□ -0.81
SMARCD1-206ENST00000549274 DCAF12L1Q5VU92 463 aa10□□□□□ -0.81
SMARCD1-206ENST00000549274 AFMIDQ63HM1 303 aa10□□□□□ -0.81
SMARCD1-206ENST00000549274 IL31Q6EBC2 164 aa10□□□□□ -0.81
SMARCD1-206ENST00000549274 CXorf57Q6NSI4 855 aaKnown RBP10□□□□□ -0.81
SMARCD1-206ENST00000549274 DRICH1Q6PGQ1 229 aaPredicted RBP10□□□□□ -0.81
SMARCD1-206ENST00000549274 C4orf22Q6V702 233 aa10□□□□□ -0.81
SMARCD1-206ENST00000549274 KIAA0907Q7Z7F0 614 aaPredicted RBP10□□□□□ -0.81
SMARCD1-206ENST00000549274 C17orf53Q8N3J3 647 aaPredicted RBP10□□□□□ -0.81
SMARCD1-206ENST00000549274 SYNPOQ8N3V7 929 aa10□□□□□ -0.81
SMARCD1-206ENST00000549274 GRK7Q8WTQ7 553 aa10□□□□□ -0.81
SMARCD1-206ENST00000549274 ZNF592Q92610 1267 aa10□□□□□ -0.81
SMARCD1-206ENST00000549274 ARHGEF2Q92974 986 aaKnown RBP10□□□□□ -0.81
SMARCD1-206ENST00000549274 BHMTQ93088 406 aa10□□□□□ -0.81
SMARCD1-206ENST00000549274 LRRC45Q96CN5 670 aa10□□□□□ -0.81
SMARCD1-206ENST00000549274 CCDC114Q96M63 670 aa10□□□□□ -0.81
SMARCD1-206ENST00000549274 TSGA13Q96PP4 275 aa10□□□□□ -0.81
SMARCD1-206ENST00000549274 PSMB7Q99436 277 aa10□□□□□ -0.81
SMARCD1-206ENST00000549274 VAT1Q99536 393 aa10□□□□□ -0.81
SMARCD1-206ENST00000549274 RPP25Q9BUL9 199 aaKnown RBP10□□□□□ -0.81
SMARCD1-206ENST00000549274 LRRC19Q9H756 370 aa10□□□□□ -0.81
SMARCD1-206ENST00000549274 ATP13A1Q9HD20 1204 aa10□□□□□ -0.81
SMARCD1-206ENST00000549274 ABCB8Q9NUT2 735 aa10□□□□□ -0.81
SMARCD1-206ENST00000549274 PLK2Q9NYY3 685 aa10□□□□□ -0.81
SMARCD1-206ENST00000549274 GTSE1Q9NYZ3 720 aa10□□□□□ -0.81
SMARCD1-206ENST00000549274 CDC23Q9UJX2 597 aa10□□□□□ -0.81
SMARCD1-206ENST00000549274 PLA2G4CQ9UP65 541 aa10□□□□□ -0.81
SMARCD1-206ENST00000549274 HEY1Q9Y5J3 304 aa10□□□□□ -0.81
SMARCD1-206ENST00000549274 F5P12259 2224 aa9.99□□□□□ -0.81
SMARCD1-206ENST00000549274 A0A0A0MRY4 1105 aa9.99□□□□□ -0.81
SMARCD1-206ENST00000549274 TBC1D3BA6NDS4 549 aa9.99□□□□□ -0.81
SMARCD1-206ENST00000549274 RASA4BC9J798 803 aa9.99□□□□□ -0.81
SMARCD1-206ENST00000549274 DFFAO00273 331 aa9.99□□□□□ -0.81
SMARCD1-206ENST00000549274 NDC80O14777 642 aa9.99□□□□□ -0.81
SMARCD1-206ENST00000549274 RASA4O43374 803 aa9.99□□□□□ -0.81
SMARCD1-206ENST00000549274 KDELR3O43731 214 aa9.99□□□□□ -0.81
SMARCD1-206ENST00000549274 MFSD11O43934 449 aa9.99□□□□□ -0.81
SMARCD1-206ENST00000549274 URI1O94763 535 aaPredicted RBP9.99□□□□□ -0.81
SMARCD1-206ENST00000549274 KAT7O95251 611 aa9.99□□□□□ -0.81
SMARCD1-206ENST00000549274 KRT10P13645 584 aa9.99□□□□□ -0.81
SMARCD1-206ENST00000549274 ALADP13716 330 aa9.99□□□□□ -0.81
SMARCD1-206ENST00000549274 HLA-FP30511 346 aa9.99□□□□□ -0.81
SMARCD1-206ENST00000549274 STIP1P31948 543 aaKnown RBP9.99□□□□□ -0.81
SMARCD1-206ENST00000549274 CXCR5P32302 372 aa9.99□□□□□ -0.81
SMARCD1-206ENST00000549274 CSKP41240 450 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms