RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 SRP54P61011 504 aaKnown RBP10.92□□□□□ -0.66
GABRB3-204ENST00000541819 BNC1Q01954 994 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 RGS1Q08116 209 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 ATP1A4Q13733 1029 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 MFSD10Q14728 455 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 CYB5D1Q6P9G0 228 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 MOXD1Q6UVY6 613 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 ARMC8Q8IUR7 673 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 EFCAB3Q8N7B9 438 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 NMD3Q96D46 503 aaKnown RBP10.92□□□□□ -0.66
GABRB3-204ENST00000541819 MRPL17Q9NRX2 175 aaKnown RBP10.92□□□□□ -0.66
GABRB3-204ENST00000541819 C1orf232A0A0U1RR37 186 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 HACD1B0YJ81 288 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 CXCL8P10145 99 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 NR2C2P49116 596 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 MMP14P50281 582 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 PUDPQ08623 228 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 SPIRE1Q08AE8 756 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 VPS72Q15906 364 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 ZNF470Q6ECI4 717 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 STX12Q86Y82 276 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 ZNF354BQ96LW1 612 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 ZDHHC15Q96MV8 337 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 CXorf56Q9H5V9 222 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 CATSPERZQ9NTU4 200 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 GNPTGQ9UJJ9 305 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 CHKBQ9Y259 395 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 TNPO3Q9Y5L0 923 aaKnown RBP10.91□□□□□ -0.66
GABRB3-204ENST00000541819 TIMM13Q9Y5L4 95 aaPredicted RBP10.91□□□□□ -0.66
GABRB3-204ENST00000541819 GTPBP1O00178 669 aaKnown RBP10.91□□□□□ -0.66
GABRB3-204ENST00000541819 KHDRBS3O75525 346 aaKnown RBP10.91□□□□□ -0.66
GABRB3-204ENST00000541819 HOXB8P17481 243 aaPredicted RBP10.91□□□□□ -0.66
GABRB3-204ENST00000541819 RAB2AP61019 212 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 GPAT3Q53EU6 434 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 BHLHB9Q6PI77 547 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 STK32CQ86UX6 486 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 LENG9Q96B70 501 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 ERLEC1Q96DZ1 483 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 TEKT5Q96M29 485 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 PGLYRP2Q96PD5 576 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 CDC42EP4Q9H3Q1 356 aaKnown RBP10.91□□□□□ -0.66
GABRB3-204ENST00000541819 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.91□□□□□ -0.66
GABRB3-204ENST00000541819 MCIDASD6RGH6 385 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 LYNP07948 512 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 GZMAP12544 262 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 RPA3P35244 121 aaPredicted RBP10.91□□□□□ -0.66
GABRB3-204ENST00000541819 CASP4P49662 377 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 MAPK11Q15759 364 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 USP41Q3LFD5 358 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 SLC39A12Q504Y0 691 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 C9orf131Q5VYM1 1079 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 REXO1L1PQ8IX06 675 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 DNERQ8NFT8 737 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 DNAJB3Q8WWF6 145 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 SLC38A2Q96QD8 506 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 MIR1-1HGQ9H1L0 117 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 NOL6Q9H6R4 1146 aaKnown RBP10.91□□□□□ -0.66
GABRB3-204ENST00000541819 TMBIM4Q9HC24 238 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 PCDH9Q9HC56 1237 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 SETD4Q9NVD3 440 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 CORO2BQ9UQ03 480 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 ANGPT4Q9Y264 503 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 GPR75-ASB3A0A0A6YYF3 556 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 TRAV19A0A0A6YYK7 116 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 SLC37A4O43826 429 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 ATP9AO75110 1047 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 AVILO75366 819 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 MED24O75448 989 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 GCATO75600 419 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 TIPRLO75663 272 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 OMPP47874 163 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 PRKAG1P54619 331 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 TOP3AQ13472 1001 aaPredicted RBP10.91□□□□□ -0.66
GABRB3-204ENST00000541819 METTL7BQ6UX53 244 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 GDPD5Q8WTR4 605 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 HTR3CQ8WXA8 447 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 ELMO1Q92556 727 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 GMCL1Q96IK5 515 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 TBCBQ99426 244 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 BTBD3Q9Y2F9 522 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 MOXD2PA6NHM9 499 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 S100A9P06702 114 aaKnown RBP10.91□□□□□ -0.66
GABRB3-204ENST00000541819 MGAT1P26572 445 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 ARF5P84085 180 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 NEDD8Q15843 81 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 PABPC1LQ4VXU2 614 aaKnown RBP10.91□□□□□ -0.66
GABRB3-204ENST00000541819 DNAJC14Q6Y2X3 702 aaPredicted RBP10.91□□□□□ -0.66
GABRB3-204ENST00000541819 EMC1Q8N766 993 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 LINC00116Q8NCU8 138 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 ATL1Q8WXF7 558 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 SOCS4Q8WXH5 440 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 BSNDQ8WZ55 320 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 TSPAN16Q9UKR8 245 aa10.91□□□□□ -0.66
GABRB3-204ENST00000541819 MANSC4A6NHS7 340 aaPredicted RBP10.9□□□□□ -0.66
GABRB3-204ENST00000541819 IDH3BO43837 385 aa10.9□□□□□ -0.66
GABRB3-204ENST00000541819 MMP13P45452 471 aa10.9□□□□□ -0.66
GABRB3-204ENST00000541819 EPS8Q12929 822 aa10.9□□□□□ -0.66
GABRB3-204ENST00000541819 FOXR1Q6PIV2 292 aa10.9□□□□□ -0.66
GABRB3-204ENST00000541819 ZNF34Q8IZ26 560 aa10.9□□□□□ -0.66
GABRB3-204ENST00000541819 NKX2-3Q8TAU0 364 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms