RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 FAM90A7PA6NKC0 464 aa5.23□□□□□ -1.57
VPS36-206ENST00000497149 SH2D7A6NKC9 451 aaPredicted RBP5.23□□□□□ -1.57
VPS36-206ENST00000497149 FAM90A22PA8MWA6 464 aa5.23□□□□□ -1.57
VPS36-206ENST00000497149 FAM90A12PA8MX19 464 aa5.23□□□□□ -1.57
VPS36-206ENST00000497149 FAM90A23PA8MXZ1 464 aa5.23□□□□□ -1.57
VPS36-206ENST00000497149 OVOL3O00110 214 aa5.23□□□□□ -1.57
VPS36-206ENST00000497149 BCAR3O75815 825 aa5.23□□□□□ -1.57
VPS36-206ENST00000497149 NFATC1O95644 943 aa5.23□□□□□ -1.57
VPS36-206ENST00000497149 CELA2AP08217 269 aa5.23□□□□□ -1.57
VPS36-206ENST00000497149 IFIT1P09914 478 aaKnown RBP5.23□□□□□ -1.57
VPS36-206ENST00000497149 CD38P28907 300 aa5.23□□□□□ -1.57
VPS36-206ENST00000497149 HNF1BP35680 557 aa5.23□□□□□ -1.57
VPS36-206ENST00000497149 PSMC2P35998 433 aaKnown RBP5.23□□□□□ -1.57
VPS36-206ENST00000497149 PGM1P36871 562 aa5.23□□□□□ -1.57
VPS36-206ENST00000497149 STAT1P42224 750 aa5.23□□□□□ -1.57
VPS36-206ENST00000497149 CPA2P48052 419 aa5.23□□□□□ -1.57
VPS36-206ENST00000497149 G3BP1Q13283 466 aaKnown RBP eCLIP5.23□□□□□ -1.57
VPS36-206ENST00000497149 PLK5Q496M5 336 aa5.23□□□□□ -1.57
VPS36-206ENST00000497149 VWA5B1Q5TIE3 1220 aa5.23□□□□□ -1.57
VPS36-206ENST00000497149 AADACL2Q6P093 401 aa5.23□□□□□ -1.57
VPS36-206ENST00000497149 FAM57BQ71RH2 274 aa5.23□□□□□ -1.57
VPS36-206ENST00000497149 LRRC8DQ7L1W4 858 aa5.23□□□□□ -1.57
VPS36-206ENST00000497149 YTHDF3Q7Z739 585 aaKnown RBP5.23□□□□□ -1.57
VPS36-206ENST00000497149 ADGRF4Q8IZF3 695 aa5.23□□□□□ -1.57
VPS36-206ENST00000497149 LSM14AQ8ND56 463 aaKnown RBP5.23□□□□□ -1.57
VPS36-206ENST00000497149 NCSTNQ92542 709 aa5.23□□□□□ -1.57
VPS36-206ENST00000497149 KAT2AQ92830 837 aa5.23□□□□□ -1.57
VPS36-206ENST00000497149 SIGLEC11Q96RL6 698 aa5.23□□□□□ -1.57
VPS36-206ENST00000497149 SEC62Q99442 399 aaKnown RBP5.23□□□□□ -1.57
VPS36-206ENST00000497149 PIMREGQ9BSJ6 248 aa5.23□□□□□ -1.57
VPS36-206ENST00000497149 SCNM1Q9BWG6 230 aa5.23□□□□□ -1.57
VPS36-206ENST00000497149 CADM1Q9BY67 442 aaKnown RBP5.23□□□□□ -1.57
VPS36-206ENST00000497149 UBN1Q9NPG3 1134 aa5.23□□□□□ -1.57
VPS36-206ENST00000497149 HSF4Q9ULV5 492 aa5.23□□□□□ -1.57
VPS36-206ENST00000497149 CXorf65A6NEN9 183 aa5.22□□□□□ -1.57
VPS36-206ENST00000497149 CGB1A6NKQ9 187 aa5.22□□□□□ -1.57
VPS36-206ENST00000497149 A6NLC8 198 aa5.22□□□□□ -1.57
VPS36-206ENST00000497149 C17orf100A8MU93 164 aa5.22□□□□□ -1.57
VPS36-206ENST00000497149 MSI1O43347 362 aaKnown RBP5.22□□□□□ -1.57
VPS36-206ENST00000497149 SH3BP5O60239 455 aa5.22□□□□□ -1.57
VPS36-206ENST00000497149 UGDHO60701 494 aa5.22□□□□□ -1.57
VPS36-206ENST00000497149 WNT1P04628 370 aa5.22□□□□□ -1.57
VPS36-206ENST00000497149 HNRNPA1P09651 372 aaKnown RBP eCLIP5.22□□□□□ -1.57
VPS36-206ENST00000497149 CTSAP10619 480 aa5.22□□□□□ -1.57
VPS36-206ENST00000497149 PRKCHP24723 683 aa5.22□□□□□ -1.57
VPS36-206ENST00000497149 GJC1P36383 396 aa5.22□□□□□ -1.57
VPS36-206ENST00000497149 ARHGAP25P42331 645 aa5.22□□□□□ -1.57
VPS36-206ENST00000497149 MTNR1AP48039 350 aa5.22□□□□□ -1.57
VPS36-206ENST00000497149 RPS13P62277 151 aaKnown RBP5.22□□□□□ -1.57
VPS36-206ENST00000497149 SRSF4Q08170 494 aaKnown RBP5.22□□□□□ -1.57
VPS36-206ENST00000497149 GALNT3Q14435 633 aa5.22□□□□□ -1.57
VPS36-206ENST00000497149 AP5B1Q2VPB7 878 aa5.22□□□□□ -1.57
VPS36-206ENST00000497149 SUPT20HL1Q3ZLR7 823 aa5.22□□□□□ -1.57
VPS36-206ENST00000497149 PAPD7Q5XG87 772 aaKnown RBP5.22□□□□□ -1.57
VPS36-206ENST00000497149 NEK8Q86SG6 692 aa5.22□□□□□ -1.57
VPS36-206ENST00000497149 TMEM217Q8N7C4 229 aa5.22□□□□□ -1.57
VPS36-206ENST00000497149 WIPF2Q8TF74 440 aaPredicted RBP5.22□□□□□ -1.57
VPS36-206ENST00000497149 CD180Q99467 661 aa5.22□□□□□ -1.57
VPS36-206ENST00000497149 NPLQ9BXD5 320 aaPredicted RBP5.22□□□□□ -1.57
VPS36-206ENST00000497149 FRMD8Q9BZ67 464 aaPredicted RBP5.22□□□□□ -1.57
VPS36-206ENST00000497149 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.22□□□□□ -1.57
VPS36-206ENST00000497149 HDAC6Q9UBN7 1215 aa5.22□□□□□ -1.57
VPS36-206ENST00000497149 UPB1Q9UBR1 384 aa5.22□□□□□ -1.57
VPS36-206ENST00000497149 CNOT7Q9UIV1 285 aaKnown RBP5.22□□□□□ -1.57
VPS36-206ENST00000497149 TBX20Q9UMR3 447 aa5.22□□□□□ -1.57
VPS36-206ENST00000497149 DPPA5A6NC42 116 aa5.21□□□□□ -1.58
VPS36-206ENST00000497149 TMEM247A6NEH6 219 aa5.21□□□□□ -1.58
VPS36-206ENST00000497149 MASP2O00187 686 aa5.21□□□□□ -1.58
VPS36-206ENST00000497149 PPFIA2O75334 1257 aa5.21□□□□□ -1.58
VPS36-206ENST00000497149 GUCY1B2O75343 617 aa5.21□□□□□ -1.58
VPS36-206ENST00000497149 TULP3O75386 442 aa5.21□□□□□ -1.58
VPS36-206ENST00000497149 FCGR2AP12318 317 aa5.21□□□□□ -1.58
VPS36-206ENST00000497149 CHRNA5P30532 468 aa5.21□□□□□ -1.58
VPS36-206ENST00000497149 LIFRP42702 1097 aa5.21□□□□□ -1.58
VPS36-206ENST00000497149 NR1H2P55055 460 aa5.21□□□□□ -1.58
VPS36-206ENST00000497149 IL13RA2Q14627 380 aa5.21□□□□□ -1.58
VPS36-206ENST00000497149 NFIL3Q16649 462 aa5.21□□□□□ -1.58
VPS36-206ENST00000497149 SLC9C2Q5TAH2 1124 aa5.21□□□□□ -1.58
VPS36-206ENST00000497149 NAPEPLDQ6IQ20 393 aa5.21□□□□□ -1.58
VPS36-206ENST00000497149 GJB7Q6PEY0 223 aa5.21□□□□□ -1.58
VPS36-206ENST00000497149 SYCE2Q6PIF2 218 aa5.21□□□□□ -1.58
VPS36-206ENST00000497149 LRIG3Q6UXM1 1119 aa5.21□□□□□ -1.58
VPS36-206ENST00000497149 CYB5R4Q7L1T6 521 aa5.21□□□□□ -1.58
VPS36-206ENST00000497149 CNGA4Q8IV77 575 aa5.21□□□□□ -1.58
VPS36-206ENST00000497149 TSPYL6Q8N831 410 aa5.21□□□□□ -1.58
VPS36-206ENST00000497149 CLSTN3Q9BQT9 956 aa5.21□□□□□ -1.58
VPS36-206ENST00000497149 PRSS22Q9GZN4 317 aa5.21□□□□□ -1.58
VPS36-206ENST00000497149 MROH8Q9H579 483 aa5.21□□□□□ -1.58
VPS36-206ENST00000497149 TTC12Q9H892 705 aaPredicted RBP5.21□□□□□ -1.58
VPS36-206ENST00000497149 PAPOLBQ9NRJ5 636 aaKnown RBP5.21□□□□□ -1.58
VPS36-206ENST00000497149 TMEM184CQ9NVA4 438 aa5.21□□□□□ -1.58
VPS36-206ENST00000497149 TMEM45AQ9NWC5 275 aa5.21□□□□□ -1.58
VPS36-206ENST00000497149 ALKBH4Q9NXW9 302 aa5.21□□□□□ -1.58
VPS36-206ENST00000497149 UTS2RQ9UKP6 389 aa5.21□□□□□ -1.58
VPS36-206ENST00000497149 LAMP3Q9UQV4 416 aa5.21□□□□□ -1.58
VPS36-206ENST00000497149 TMEM98Q9Y2Y6 226 aa5.21□□□□□ -1.58
VPS36-206ENST00000497149 KCNU1A8MYU2 1149 aa5.2□□□□□ -1.58
VPS36-206ENST00000497149 J3KRW8 73 aa5.2□□□□□ -1.58
VPS36-206ENST00000497149 PRPF4O43172 522 aaKnown RBP eCLIP5.2□□□□□ -1.58
VPS36-206ENST00000497149 WDHD1O75717 1129 aaPredicted RBP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms