RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 PPP6CO00743 305 aa4.32□□□□□ -1.72
CLK1-213ENST00000492793 PPFIA2O75334 1257 aa4.32□□□□□ -1.72
CLK1-213ENST00000492793 TUBB4AP04350 444 aa4.32□□□□□ -1.72
CLK1-213ENST00000492793 ATP1A3P13637 1013 aa4.32□□□□□ -1.72
CLK1-213ENST00000492793 ARSAP15289 507 aa4.32□□□□□ -1.72
CLK1-213ENST00000492793 TNFAIP3P21580 790 aa4.32□□□□□ -1.72
CLK1-213ENST00000492793 CD72P21854 359 aa4.32□□□□□ -1.72
CLK1-213ENST00000492793 CERS1P27544 350 aa4.32□□□□□ -1.72
CLK1-213ENST00000492793 EPHB2P29323 1055 aa4.32□□□□□ -1.72
CLK1-213ENST00000492793 TYK2P29597 1187 aa4.32□□□□□ -1.72
CLK1-213ENST00000492793 CHRNA5P30532 468 aa4.32□□□□□ -1.72
CLK1-213ENST00000492793 ELF1P32519 619 aa4.32□□□□□ -1.72
CLK1-213ENST00000492793 GGT5P36269 586 aa4.32□□□□□ -1.72
CLK1-213ENST00000492793 STAT1P42224 750 aa4.32□□□□□ -1.72
CLK1-213ENST00000492793 SKIV2L2P42285 1042 aaKnown RBP4.32□□□□□ -1.72
CLK1-213ENST00000492793 MVDP53602 400 aa4.32□□□□□ -1.72
CLK1-213ENST00000492793 HSF1Q00613 529 aa4.32□□□□□ -1.72
CLK1-213ENST00000492793 GALNT2Q10471 571 aa4.32□□□□□ -1.72
CLK1-213ENST00000492793 FOXF2Q12947 444 aa4.32□□□□□ -1.72
CLK1-213ENST00000492793 DDX10Q13206 875 aaKnown RBP4.32□□□□□ -1.72
CLK1-213ENST00000492793 KRTAP15-1Q3LI76 137 aa4.32□□□□□ -1.72
CLK1-213ENST00000492793 FAM171A1Q5VUB5 890 aa4.32□□□□□ -1.72
CLK1-213ENST00000492793 ZNF793Q6ZN11 406 aa4.32□□□□□ -1.72
CLK1-213ENST00000492793 GALNT7Q86SF2 657 aa4.32□□□□□ -1.72
CLK1-213ENST00000492793 CCDC25Q86WR0 208 aa4.32□□□□□ -1.72
CLK1-213ENST00000492793 PAQR4Q8N4S7 273 aaPredicted RBP4.32□□□□□ -1.72
CLK1-213ENST00000492793 TMEM217Q8N7C4 229 aa4.32□□□□□ -1.72
CLK1-213ENST00000492793 OR52N4Q8NGI2 321 aa4.32□□□□□ -1.72
CLK1-213ENST00000492793 RUFY2Q8WXA3 655 aa4.32□□□□□ -1.72
CLK1-213ENST00000492793 ST8SIA4Q92187 359 aa4.32□□□□□ -1.72
CLK1-213ENST00000492793 CUL5Q93034 780 aa4.32□□□□□ -1.72
CLK1-213ENST00000492793 ZUFSPQ96AP4 578 aa4.32□□□□□ -1.72
CLK1-213ENST00000492793 KIF1BPQ96EK5 621 aa4.32□□□□□ -1.72
CLK1-213ENST00000492793 ZNF419Q96HQ0 510 aaPredicted RBP4.32□□□□□ -1.72
CLK1-213ENST00000492793 CRAMP1Q96RY5 1269 aa4.32□□□□□ -1.72
CLK1-213ENST00000492793 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.32□□□□□ -1.72
CLK1-213ENST00000492793 AAMDCQ9H7C9 122 aa4.32□□□□□ -1.72
CLK1-213ENST00000492793 VEZTQ9HBM0 779 aa4.32□□□□□ -1.72
CLK1-213ENST00000492793 MLXIPLQ9NP71 852 aa4.32□□□□□ -1.72
CLK1-213ENST00000492793 PGAP2Q9UHJ9 254 aa4.32□□□□□ -1.72
CLK1-213ENST00000492793 DTX4Q9Y2E6 619 aa4.32□□□□□ -1.72
CLK1-213ENST00000492793 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.31□□□□□ -1.72
CLK1-213ENST00000492793 C2CD4BA6NLJ0 364 aa4.31□□□□□ -1.72
CLK1-213ENST00000492793 KCNU1A8MYU2 1149 aa4.31□□□□□ -1.72
CLK1-213ENST00000492793 TSPAN4O14817 238 aa4.31□□□□□ -1.72
CLK1-213ENST00000492793 MBD4O95243 580 aa4.31□□□□□ -1.72
CLK1-213ENST00000492793 SGPL1O95470 568 aa4.31□□□□□ -1.72
CLK1-213ENST00000492793 HLA-DQA2P01906 255 aa4.31□□□□□ -1.72
CLK1-213ENST00000492793 FCGR2AP12318 317 aa4.31□□□□□ -1.72
CLK1-213ENST00000492793 HNF1BP35680 557 aa4.31□□□□□ -1.72
CLK1-213ENST00000492793 INHBEP58166 350 aa4.31□□□□□ -1.72
CLK1-213ENST00000492793 FAM69AQ5T7M9 428 aa4.31□□□□□ -1.72
CLK1-213ENST00000492793 SLC9C2Q5TAH2 1124 aa4.31□□□□□ -1.72
CLK1-213ENST00000492793 TTLL5Q6EMB2 1281 aa4.31□□□□□ -1.72
CLK1-213ENST00000492793 B4GALNT4Q76KP1 1039 aa4.31□□□□□ -1.72
CLK1-213ENST00000492793 RSRC2Q7L4I2 434 aaKnown RBP4.31□□□□□ -1.72
CLK1-213ENST00000492793 YTHDF3Q7Z739 585 aaKnown RBP4.31□□□□□ -1.72
CLK1-213ENST00000492793 DNAJC10Q8IXB1 793 aa4.31□□□□□ -1.72
CLK1-213ENST00000492793 SCAIQ8N9R8 606 aa4.31□□□□□ -1.72
CLK1-213ENST00000492793 DNAAF1Q8NEP3 725 aa4.31□□□□□ -1.72
CLK1-213ENST00000492793 RFWD2Q8NHY2 731 aa4.31□□□□□ -1.72
CLK1-213ENST00000492793 CNOT9Q92600 299 aaKnown RBP4.31□□□□□ -1.72
CLK1-213ENST00000492793 SH3KBP1Q96B97 665 aa4.31□□□□□ -1.72
CLK1-213ENST00000492793 RNF125Q96EQ8 232 aa4.31□□□□□ -1.72
CLK1-213ENST00000492793 P2RY11Q96G91 374 aa4.31□□□□□ -1.72
CLK1-213ENST00000492793 APOPT1Q96IL0 206 aa4.31□□□□□ -1.72
CLK1-213ENST00000492793 GATA5Q9BWX5 397 aaPredicted RBP4.31□□□□□ -1.72
CLK1-213ENST00000492793 NPLQ9BXD5 320 aaPredicted RBP4.31□□□□□ -1.72
CLK1-213ENST00000492793 QTRT1Q9BXR0 403 aaKnown RBP4.31□□□□□ -1.72
CLK1-213ENST00000492793 UBA5Q9GZZ9 404 aa4.31□□□□□ -1.72
CLK1-213ENST00000492793 PAIP1Q9H074 479 aaKnown RBP4.31□□□□□ -1.72
CLK1-213ENST00000492793 SLC32A1Q9H598 525 aa4.31□□□□□ -1.72
CLK1-213ENST00000492793 TTC12Q9H892 705 aaPredicted RBP4.31□□□□□ -1.72
CLK1-213ENST00000492793 TMEM248Q9NWD8 314 aa4.31□□□□□ -1.72
CLK1-213ENST00000492793 PTGFRNQ9P2B2 879 aa4.31□□□□□ -1.72
CLK1-213ENST00000492793 UPB1Q9UBR1 384 aa4.31□□□□□ -1.72
CLK1-213ENST00000492793 UTS2RQ9UKP6 389 aa4.31□□□□□ -1.72
CLK1-213ENST00000492793 PNMA2Q9UL42 364 aa4.31□□□□□ -1.72
CLK1-213ENST00000492793 COX11Q9Y6N1 276 aa4.31□□□□□ -1.72
CLK1-213ENST00000492793 SMIM35A0A1B0GVV1 85 aa4.3□□□□□ -1.72
CLK1-213ENST00000492793 TMEM247A6NEH6 219 aa4.3□□□□□ -1.72
CLK1-213ENST00000492793 RHODO00212 210 aa4.3□□□□□ -1.72
CLK1-213ENST00000492793 TNPO2O14787 897 aaKnown RBP4.3□□□□□ -1.72
CLK1-213ENST00000492793 TULP3O75386 442 aa4.3□□□□□ -1.72
CLK1-213ENST00000492793 IL1AP01583 271 aa4.3□□□□□ -1.72
CLK1-213ENST00000492793 CYP19A1P11511 503 aaPredicted RBP4.3□□□□□ -1.72
CLK1-213ENST00000492793 CDH15P55291 814 aa4.3□□□□□ -1.72
CLK1-213ENST00000492793 ZBTB16Q05516 673 aa4.3□□□□□ -1.72
CLK1-213ENST00000492793 SRSF4Q08170 494 aaKnown RBP4.3□□□□□ -1.72
CLK1-213ENST00000492793 PMPCAQ10713 525 aa4.3□□□□□ -1.72
CLK1-213ENST00000492793 SRSF7Q16629 238 aaKnown RBP eCLIP4.3□□□□□ -1.72
CLK1-213ENST00000492793 C5orf22Q49AR2 442 aa4.3□□□□□ -1.72
CLK1-213ENST00000492793 ALG10Q5BKT4 473 aa4.3□□□□□ -1.72
CLK1-213ENST00000492793 ALG10BQ5I7T1 473 aa4.3□□□□□ -1.72
CLK1-213ENST00000492793 EARS2Q5JPH6 523 aaKnown RBP4.3□□□□□ -1.72
CLK1-213ENST00000492793 TMEM268Q5VZI3 342 aa4.3□□□□□ -1.72
CLK1-213ENST00000492793 FAAH2Q6GMR7 532 aa4.3□□□□□ -1.72
CLK1-213ENST00000492793 SLC18B1Q6NT16 456 aa4.3□□□□□ -1.72
CLK1-213ENST00000492793 FAM57BQ71RH2 274 aa4.3□□□□□ -1.72
CLK1-213ENST00000492793 RTL10Q7L3V2 364 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms