RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 ATP9BO43861 1147 aa19.28■□□□□ 0.68
SREBF1-212ENST00000478616 ZMPSTE24O75844 475 aa19.28■□□□□ 0.68
SREBF1-212ENST00000478616 KRT3P12035 628 aa19.28■□□□□ 0.68
SREBF1-212ENST00000478616 ENGP17813 658 aa19.28■□□□□ 0.68
SREBF1-212ENST00000478616 ZNF252P-AS1Q0IIN9 211 aa19.28■□□□□ 0.68
SREBF1-212ENST00000478616 MTA1Q13330 715 aa19.28■□□□□ 0.68
SREBF1-212ENST00000478616 HGSNATQ68CP4 663 aa19.28■□□□□ 0.68
SREBF1-212ENST00000478616 STRADAQ7RTN6 431 aa19.28■□□□□ 0.68
SREBF1-212ENST00000478616 TFAP2DQ7Z6R9 452 aa19.28■□□□□ 0.68
SREBF1-212ENST00000478616 NLRP14Q86W24 1093 aa19.28■□□□□ 0.68
SREBF1-212ENST00000478616 AADATQ8N5Z0 425 aa19.28■□□□□ 0.68
SREBF1-212ENST00000478616 OR2I1PQ8NGU4 316 aa19.28■□□□□ 0.68
SREBF1-212ENST00000478616 FAM131CQ96AQ9 280 aa19.28■□□□□ 0.68
SREBF1-212ENST00000478616 PABPC3Q9H361 631 aaKnown RBP19.28■□□□□ 0.68
SREBF1-212ENST00000478616 HAUS4Q9H6D7 363 aa19.28■□□□□ 0.68
SREBF1-212ENST00000478616 FBRSQ9HAH7 460 aa19.28■□□□□ 0.68
SREBF1-212ENST00000478616 SARDHQ9UL12 918 aa19.28■□□□□ 0.68
SREBF1-212ENST00000478616 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.27■□□□□ 0.68
SREBF1-212ENST00000478616 EDDM13A0A1B0GTR0 161 aa19.27■□□□□ 0.68
SREBF1-212ENST00000478616 TARSL2A2RTX5 802 aaKnown RBP19.27■□□□□ 0.68
SREBF1-212ENST00000478616 K7ERQ8 282 aa19.27■□□□□ 0.68
SREBF1-212ENST00000478616 MID1O15344 667 aa19.27■□□□□ 0.68
SREBF1-212ENST00000478616 ZBTB24O43167 697 aaPredicted RBP19.27■□□□□ 0.68
SREBF1-212ENST00000478616 SMAD6O43541 496 aaKnown RBP19.27■□□□□ 0.68
SREBF1-212ENST00000478616 ZNF821O75541 412 aaPredicted RBP19.27■□□□□ 0.68
SREBF1-212ENST00000478616 CD160O95971 181 aa19.27■□□□□ 0.68
SREBF1-212ENST00000478616 SDHBP21912 280 aa19.27■□□□□ 0.68
SREBF1-212ENST00000478616 OXTRP30559 389 aa19.27■□□□□ 0.68
SREBF1-212ENST00000478616 SDC4P31431 198 aa19.27■□□□□ 0.68
SREBF1-212ENST00000478616 HOXD12P35452 270 aa19.27■□□□□ 0.68
SREBF1-212ENST00000478616 NRG1Q02297 640 aaPredicted RBP19.27■□□□□ 0.68
SREBF1-212ENST00000478616 ZNF177Q13360 481 aaPredicted RBP19.27■□□□□ 0.68
SREBF1-212ENST00000478616 DCAF12L1Q5VU92 463 aa19.27■□□□□ 0.68
SREBF1-212ENST00000478616 ZNF776Q68DI1 518 aaPredicted RBP19.27■□□□□ 0.68
SREBF1-212ENST00000478616 MMAAQ8IVH4 418 aaKnown RBP19.27■□□□□ 0.68
SREBF1-212ENST00000478616 SH2D3CQ8N5H7 860 aa19.27■□□□□ 0.68
SREBF1-212ENST00000478616 ARFGAP1Q8N6T3 406 aa19.27■□□□□ 0.68
SREBF1-212ENST00000478616 CADM4Q8NFZ8 388 aa19.27■□□□□ 0.68
SREBF1-212ENST00000478616 OR7D4Q8NG98 312 aa19.27■□□□□ 0.68
SREBF1-212ENST00000478616 FAM172AQ8WUF8 416 aa19.27■□□□□ 0.68
SREBF1-212ENST00000478616 NUP58Q9BVL2 599 aa19.27■□□□□ 0.68
SREBF1-212ENST00000478616 TRIM7Q9C029 511 aa19.27■□□□□ 0.68
SREBF1-212ENST00000478616 EBF2Q9HAK2 575 aa19.27■□□□□ 0.68
SREBF1-212ENST00000478616 VPS51Q9UID3 782 aa19.27■□□□□ 0.68
SREBF1-212ENST00000478616 ACTL7AQ9Y615 435 aa19.27■□□□□ 0.68
SREBF1-212ENST00000478616 ATMINO43313 823 aaPredicted RBP19.26■□□□□ 0.67
SREBF1-212ENST00000478616 NDUFS2O75306 463 aa19.26■□□□□ 0.67
SREBF1-212ENST00000478616 MOCS3O95396 460 aa19.26■□□□□ 0.67
SREBF1-212ENST00000478616 CALB1P05937 261 aa19.26■□□□□ 0.67
SREBF1-212ENST00000478616 IGHV4-34P06331 123 aa19.26■□□□□ 0.67
SREBF1-212ENST00000478616 SERPINF2P08697 491 aa19.26■□□□□ 0.67
SREBF1-212ENST00000478616 SKILP12757 684 aa19.26■□□□□ 0.67
SREBF1-212ENST00000478616 SRCP12931 536 aa19.26■□□□□ 0.67
SREBF1-212ENST00000478616 GPD1P21695 349 aa19.26■□□□□ 0.67
SREBF1-212ENST00000478616 DRD3P35462 400 aa19.26■□□□□ 0.67
SREBF1-212ENST00000478616 ZBTB16Q05516 673 aa19.26■□□□□ 0.67
SREBF1-212ENST00000478616 CST6Q15828 149 aa19.26■□□□□ 0.67
SREBF1-212ENST00000478616 DUOXA1Q1HG43 343 aa19.26■□□□□ 0.67
SREBF1-212ENST00000478616 FIGNQ5HY92 759 aa19.26■□□□□ 0.67
SREBF1-212ENST00000478616 SND1Q7KZF4 910 aaKnown RBP eCLIP19.26■□□□□ 0.678e-8■■□□□ 13.3
SREBF1-212ENST00000478616 PYROXD2Q8N2H3 581 aa19.26■□□□□ 0.67
SREBF1-212ENST00000478616 OSBPL2Q9H1P3 480 aa19.26■□□□□ 0.67
SREBF1-212ENST00000478616 SEPT11Q9NVA2 429 aaKnown RBP19.26■□□□□ 0.67
SREBF1-212ENST00000478616 PPARGC1AQ9UBK2 798 aaKnown RBP19.26■□□□□ 0.67
SREBF1-212ENST00000478616 SLC6A14Q9UN76 642 aa19.26■□□□□ 0.67
SREBF1-212ENST00000478616 HS3ST2Q9Y278 367 aa19.26■□□□□ 0.67
SREBF1-212ENST00000478616 CABIN1Q9Y6J0 2220 aa19.25■□□□□ 0.67
SREBF1-212ENST00000478616 TMCO5BA8MYB1 307 aa19.25■□□□□ 0.67
SREBF1-212ENST00000478616 PLK4O00444 970 aa19.25■□□□□ 0.67
SREBF1-212ENST00000478616 GIPC1O14908 333 aa19.25■□□□□ 0.67
SREBF1-212ENST00000478616 SRGAP2O75044 1071 aa19.25■□□□□ 0.67
SREBF1-212ENST00000478616 GJB3O75712 270 aa19.25■□□□□ 0.67
SREBF1-212ENST00000478616 LRIG2O94898 1065 aa19.25■□□□□ 0.67
SREBF1-212ENST00000478616 ZNF143P52747 638 aaPredicted RBP19.25■□□□□ 0.67
SREBF1-212ENST00000478616 ST8SIA6P61647 398 aa19.25■□□□□ 0.67
SREBF1-212ENST00000478616 SULT2A1Q06520 285 aa19.25■□□□□ 0.67
SREBF1-212ENST00000478616 PLEKHA7Q6IQ23 1121 aa19.25■□□□□ 0.67
SREBF1-212ENST00000478616 SETD3Q86TU7 594 aaPredicted RBP19.25■□□□□ 0.67
SREBF1-212ENST00000478616 CCDC117Q8IWD4 279 aaPredicted RBP19.25■□□□□ 0.67
SREBF1-212ENST00000478616 NTAN1Q96AB6 310 aa19.25■□□□□ 0.67
SREBF1-212ENST00000478616 MCEEQ96PE7 176 aa19.25■□□□□ 0.67
SREBF1-212ENST00000478616 EDEM3Q9BZQ6 932 aa19.25■□□□□ 0.67
SREBF1-212ENST00000478616 NEUROG2Q9H2A3 272 aa19.25■□□□□ 0.67
SREBF1-212ENST00000478616 NOL6Q9H6R4 1146 aaKnown RBP19.25■□□□□ 0.67
SREBF1-212ENST00000478616 VPS28Q9UK41 221 aa19.25■□□□□ 0.67
SREBF1-212ENST00000478616 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.25■□□□□ 0.67
SREBF1-212ENST00000478616 A0A1W2PP55 124 aa19.24■□□□□ 0.67
SREBF1-212ENST00000478616 SEMA4FO95754 770 aa19.24■□□□□ 0.67
SREBF1-212ENST00000478616 CTSLP07711 333 aa19.24■□□□□ 0.67
SREBF1-212ENST00000478616 RHOCP08134 193 aa19.24■□□□□ 0.67
SREBF1-212ENST00000478616 ACADMP11310 421 aa19.24■□□□□ 0.67
SREBF1-212ENST00000478616 ARF5P84085 180 aa19.24■□□□□ 0.67
SREBF1-212ENST00000478616 SCAPQ12770 1279 aa19.24■□□□□ 0.67
SREBF1-212ENST00000478616 SEMA3BQ13214 749 aa19.24■□□□□ 0.67
SREBF1-212ENST00000478616 MAMLD1Q13495 774 aa19.24■□□□□ 0.67
SREBF1-212ENST00000478616 DLG2Q15700 870 aa19.24■□□□□ 0.67
SREBF1-212ENST00000478616 ASIC2Q16515 512 aa19.24■□□□□ 0.67
SREBF1-212ENST00000478616 FILIP1LQ4L180 1135 aa19.24■□□□□ 0.67
SREBF1-212ENST00000478616 PPM1JQ5JR12 505 aa19.24■□□□□ 0.67
SREBF1-212ENST00000478616 LINGO4Q6UY18 593 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms