RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 PHF13Q86YI8 300 aaPredicted RBP16.67■□□□□ 0.26
COL1A1-205ENST00000476387 CCAR2Q8N163 923 aaKnown RBP16.67■□□□□ 0.26
COL1A1-205ENST00000476387 EMC1Q8N766 993 aa16.67■□□□□ 0.26
COL1A1-205ENST00000476387 CFAP57Q96MR6 1250 aa16.67■□□□□ 0.26
COL1A1-205ENST00000476387 PCDHB18PQ96TA0 734 aa16.67■□□□□ 0.26
COL1A1-205ENST00000476387 TMEM121BQ9BXQ6 578 aaPredicted RBP16.67■□□□□ 0.26
COL1A1-205ENST00000476387 C6orf106Q9H6K1 298 aaPredicted RBP16.67■□□□□ 0.26
COL1A1-205ENST00000476387 ARHGEF38Q9NXL2 777 aa16.67■□□□□ 0.26
COL1A1-205ENST00000476387 ERVW-1Q9UQF0 538 aa16.67■□□□□ 0.26
COL1A1-205ENST00000476387 NEUROG3Q9Y4Z2 214 aa16.67■□□□□ 0.26
COL1A1-205ENST00000476387 ITIH6Q6UXX5 1313 aa16.67■□□□□ 0.26
COL1A1-205ENST00000476387 CABIN1Q9Y6J0 2220 aa16.66■□□□□ 0.26
COL1A1-205ENST00000476387 CHD6Q8TD26 2715 aa16.66■□□□□ 0.26
COL1A1-205ENST00000476387 TARSL2A2RTX5 802 aaKnown RBP16.66■□□□□ 0.26
COL1A1-205ENST00000476387 TMEM8BA6NDV4 472 aa16.66■□□□□ 0.26
COL1A1-205ENST00000476387 LRRC53A6NM62 1247 aa16.66■□□□□ 0.26
COL1A1-205ENST00000476387 SH3BP5O60239 455 aa16.66■□□□□ 0.26
COL1A1-205ENST00000476387 TOP3BO95985 862 aaKnown RBP16.66■□□□□ 0.26
COL1A1-205ENST00000476387 PDGFRAP16234 1089 aa16.66■□□□□ 0.26
COL1A1-205ENST00000476387 SPINK2P20155 84 aa16.66■□□□□ 0.26
COL1A1-205ENST00000476387 FANCCQ00597 558 aa16.66■□□□□ 0.26
COL1A1-205ENST00000476387 CDO1Q16878 200 aa16.66■□□□□ 0.26
COL1A1-205ENST00000476387 ACBD5Q5T8D3 534 aaPredicted RBP16.66■□□□□ 0.26
COL1A1-205ENST00000476387 PHLDB2Q86SQ0 1253 aa16.66■□□□□ 0.26
COL1A1-205ENST00000476387 NAXDQ8IW45 347 aa16.66■□□□□ 0.26
COL1A1-205ENST00000476387 SNX19Q92543 992 aa16.66■□□□□ 0.26
COL1A1-205ENST00000476387 BAP1Q92560 729 aa16.66■□□□□ 0.26
COL1A1-205ENST00000476387 NAP1L5Q96NT1 182 aaPredicted RBP16.66■□□□□ 0.26
COL1A1-205ENST00000476387 SELENOOQ9BVL4 669 aa16.66■□□□□ 0.26
COL1A1-205ENST00000476387 PABPC3Q9H361 631 aaKnown RBP16.66■□□□□ 0.26
COL1A1-205ENST00000476387 NCKAP1Q9Y2A7 1128 aa16.66■□□□□ 0.26
COL1A1-205ENST00000476387 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.65■□□□□ 0.26
COL1A1-205ENST00000476387 EDDM13A0A1B0GTR0 161 aa16.65■□□□□ 0.26
COL1A1-205ENST00000476387 ANKRD62A6NC57 917 aa16.65■□□□□ 0.26
COL1A1-205ENST00000476387 C1QTNF9BB2RNN3 333 aa16.65■□□□□ 0.26
COL1A1-205ENST00000476387 SIN3BO75182 1162 aa16.65■□□□□ 0.26
COL1A1-205ENST00000476387 CLDN11O75508 207 aa16.65■□□□□ 0.26
COL1A1-205ENST00000476387 C1QTNF9P0C862 333 aa16.65■□□□□ 0.26
COL1A1-205ENST00000476387 TNFAIP3P21580 790 aa16.65■□□□□ 0.26
COL1A1-205ENST00000476387 GSCP56915 257 aaPredicted RBP16.65■□□□□ 0.26
COL1A1-205ENST00000476387 FAM193AP78312 1265 aa16.65■□□□□ 0.26
COL1A1-205ENST00000476387 ATP11AP98196 1134 aa16.65■□□□□ 0.26
COL1A1-205ENST00000476387 ECT2LQ008S8 904 aa16.65■□□□□ 0.26
COL1A1-205ENST00000476387 BNC1Q01954 994 aa16.65■□□□□ 0.26
COL1A1-205ENST00000476387 C1QBPQ07021 282 aaKnown RBP16.65■□□□□ 0.26
COL1A1-205ENST00000476387 ZNF177Q13360 481 aaPredicted RBP16.65■□□□□ 0.26
COL1A1-205ENST00000476387 TEAD4Q15561 434 aa16.65■□□□□ 0.26
COL1A1-205ENST00000476387 TRIP6Q15654 476 aaKnown RBP16.65■□□□□ 0.26
COL1A1-205ENST00000476387 C9orf64Q5T6V5 341 aa16.65■□□□□ 0.26
COL1A1-205ENST00000476387 SFMBT2Q5VUG0 894 aa16.65■□□□□ 0.26
COL1A1-205ENST00000476387 TRNP1Q6NT89 227 aa16.65■□□□□ 0.26
COL1A1-205ENST00000476387 PPP1R2P3Q6NXS1 205 aa16.65■□□□□ 0.26
COL1A1-205ENST00000476387 DNAJC24Q6P3W2 148 aa16.65■□□□□ 0.26
COL1A1-205ENST00000476387 LRRC31Q6UY01 552 aa16.65■□□□□ 0.26
COL1A1-205ENST00000476387 MON1BQ7L1V2 547 aa16.65■□□□□ 0.26
COL1A1-205ENST00000476387 FAM131BQ86XD5 332 aa16.65■□□□□ 0.26
COL1A1-205ENST00000476387 KDF1Q8NAX2 398 aaPredicted RBP16.65■□□□□ 0.26
COL1A1-205ENST00000476387 C3orf20Q8ND61 904 aa16.65■□□□□ 0.26
COL1A1-205ENST00000476387 RXFP2Q8WXD0 754 aa16.65■□□□□ 0.26
COL1A1-205ENST00000476387 GATA6Q92908 595 aa16.65■□□□□ 0.26
COL1A1-205ENST00000476387 IGSF8Q969P0 613 aa16.65■□□□□ 0.26
COL1A1-205ENST00000476387 BIRC7Q96CA5 298 aa16.65■□□□□ 0.26
COL1A1-205ENST00000476387 PPP1R9BQ96SB3 815 aa16.65■□□□□ 0.26
COL1A1-205ENST00000476387 MTG2Q9H4K7 406 aa16.65■□□□□ 0.26
COL1A1-205ENST00000476387 GAREM1Q9H706 876 aa16.65■□□□□ 0.26
COL1A1-205ENST00000476387 MSRB2Q9Y3D2 182 aa16.65■□□□□ 0.26
COL1A1-205ENST00000476387 PCDHB9Q9Y5E1 797 aa16.65■□□□□ 0.26
COL1A1-205ENST00000476387 PCDHGB2Q9Y5G2 931 aa16.65■□□□□ 0.26
COL1A1-205ENST00000476387 AKAP13Q12802 2813 aa16.64■□□□□ 0.25
COL1A1-205ENST00000476387 FAM221BA6H8Z2 402 aa16.64■□□□□ 0.25
COL1A1-205ENST00000476387 HYAL3O43820 417 aaPredicted RBP16.64■□□□□ 0.25
COL1A1-205ENST00000476387 KRT3P12035 628 aa16.64■□□□□ 0.25
COL1A1-205ENST00000476387 CD27P26842 260 aa16.64■□□□□ 0.25
COL1A1-205ENST00000476387 CTSOP43234 321 aaPredicted RBP16.64■□□□□ 0.25
COL1A1-205ENST00000476387 GRIA4P48058 902 aa16.64■□□□□ 0.25
COL1A1-205ENST00000476387 PLK1P53350 603 aa16.64■□□□□ 0.25
COL1A1-205ENST00000476387 CDH4P55283 916 aa16.64■□□□□ 0.25
COL1A1-205ENST00000476387 UBASH3AP57075 661 aa16.64■□□□□ 0.25
COL1A1-205ENST00000476387 SULT2A1Q06520 285 aa16.64■□□□□ 0.25
COL1A1-205ENST00000476387 PTP4A2Q12974 167 aa16.64■□□□□ 0.25
COL1A1-205ENST00000476387 NR1I3Q14994 352 aa16.64■□□□□ 0.25
COL1A1-205ENST00000476387 CST6Q15828 149 aa16.64■□□□□ 0.25
COL1A1-205ENST00000476387 HLA-BQ31612 363 aa16.64■□□□□ 0.25
COL1A1-205ENST00000476387 IRF2BP2Q7Z5L9 587 aa16.64■□□□□ 0.25
COL1A1-205ENST00000476387 C14orf80Q86SX3 495 aa16.64■□□□□ 0.25
COL1A1-205ENST00000476387 GLRX5Q86SX6 157 aa16.64■□□□□ 0.25
COL1A1-205ENST00000476387 JOSD2Q8TAC2 188 aa16.64■□□□□ 0.25
COL1A1-205ENST00000476387 CAMK1GQ96NX5 476 aa16.64■□□□□ 0.25
COL1A1-205ENST00000476387 EDEM3Q9BZQ6 932 aa16.64■□□□□ 0.25
COL1A1-205ENST00000476387 IL21RQ9HBE5 538 aa16.64■□□□□ 0.25
COL1A1-205ENST00000476387 TM9SF3Q9HD45 589 aa16.64■□□□□ 0.25
COL1A1-205ENST00000476387 FBXL12Q9NXK8 326 aa16.64■□□□□ 0.25
COL1A1-205ENST00000476387 FNDC3AQ9Y2H6 1198 aaKnown RBP16.64■□□□□ 0.25
COL1A1-205ENST00000476387 CFAP47Q6ZTR5 3102 aa16.63■□□□□ 0.25
COL1A1-205ENST00000476387 A0A1B0GVT2 93 aa16.63■□□□□ 0.25
COL1A1-205ENST00000476387 C2CD4BA6NLJ0 364 aa16.63■□□□□ 0.25
COL1A1-205ENST00000476387 TTC34A8MYJ7 566 aa16.63■□□□□ 0.25
COL1A1-205ENST00000476387 CBFA2T3O75081 653 aa16.63■□□□□ 0.25
COL1A1-205ENST00000476387 FSBPO95073 299 aa16.63■□□□□ 0.25
COL1A1-205ENST00000476387 GJB6O95452 261 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms