RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	CCL21	O00585	134 aa		5.19	□□□□□ -1.58
MSI2-216	ENST00000582772	PRPF40A	O75400	957 aa	Known RBP	5.19	□□□□□ -1.58
MSI2-216	ENST00000582772	CREG1	O75629	220 aa		5.19	□□□□□ -1.58
MSI2-216	ENST00000582772	KRT34	O76011	436 aa		5.19	□□□□□ -1.58
MSI2-216	ENST00000582772	ATE1	O95260	518 aa		5.19	□□□□□ -1.58
MSI2-216	ENST00000582772	PENK	P01210	267 aa	Predicted RBP	5.19	□□□□□ -1.58
MSI2-216	ENST00000582772	FAM157C	P0CG43	387 aa		5.19	□□□□□ -1.58
MSI2-216	ENST00000582772	CD19	P15391	556 aa		5.19	□□□□□ -1.58
MSI2-216	ENST00000582772	GLRA2	P23416	452 aa		5.19	□□□□□ -1.58
MSI2-216	ENST00000582772	CIITA	P33076	1130 aa		5.19	□□□□□ -1.58
MSI2-216	ENST00000582772	YARS	P54577	528 aa	Known RBP	5.19	□□□□□ -1.58
MSI2-216	ENST00000582772	OTUD4	Q01804	1114 aa	Known RBP	5.19	□□□□□ -1.58
MSI2-216	ENST00000582772	TRA2A	Q13595	282 aa	Known RBP eCLIP	5.19	□□□□□ -1.58
MSI2-216	ENST00000582772	SYCP1	Q15431	976 aa		5.19	□□□□□ -1.58
MSI2-216	ENST00000582772	DDR2	Q16832	855 aa		5.19	□□□□□ -1.58
MSI2-216	ENST00000582772	CFAP221	Q4G0U5	840 aa		5.19	□□□□□ -1.58
MSI2-216	ENST00000582772	SDHAF4	Q5VUM1	108 aa		5.19	□□□□□ -1.58
MSI2-216	ENST00000582772	EEF1DP3	Q658K8	133 aa		5.19	□□□□□ -1.58
MSI2-216	ENST00000582772	TMEM215	Q68D42	235 aa		5.19	□□□□□ -1.58
MSI2-216	ENST00000582772	FCRL6	Q6DN72	434 aa		5.19	□□□□□ -1.58
MSI2-216	ENST00000582772	HEPHL1	Q6MZM0	1159 aa		5.19	□□□□□ -1.58
MSI2-216	ENST00000582772	TYW1B	Q6NUM6	668 aa		5.19	□□□□□ -1.58
MSI2-216	ENST00000582772	HTR3D	Q70Z44	454 aa		5.19	□□□□□ -1.58
MSI2-216	ENST00000582772	SND1	Q7KZF4	910 aa	Known RBP eCLIP	5.19	□□□□□ -1.58
MSI2-216	ENST00000582772	PARG	Q86W56	976 aa		5.19	□□□□□ -1.58
MSI2-216	ENST00000582772	CCNJL	Q8IV13	435 aa		5.19	□□□□□ -1.58
MSI2-216	ENST00000582772	BMPER	Q8N8U9	685 aa		5.19	□□□□□ -1.58
MSI2-216	ENST00000582772	C3orf20	Q8ND61	904 aa		5.19	□□□□□ -1.58
MSI2-216	ENST00000582772	FDCSP	Q8NFU4	85 aa		5.19	□□□□□ -1.58
MSI2-216	ENST00000582772	OR13H1	Q8NG92	308 aa		5.19	□□□□□ -1.58
MSI2-216	ENST00000582772	SLC5A5	Q92911	643 aa		5.19	□□□□□ -1.58
MSI2-216	ENST00000582772	ART4	Q93070	314 aa		5.19	□□□□□ -1.58
MSI2-216	ENST00000582772	CEP170P1	Q96L14	293 aa		5.19	□□□□□ -1.58
MSI2-216	ENST00000582772	BACH2	Q9BYV9	841 aa		5.19	□□□□□ -1.58
MSI2-216	ENST00000582772	ILKAP	Q9H0C8	392 aa	Predicted RBP	5.19	□□□□□ -1.58
MSI2-216	ENST00000582772	ING2	Q9H160	280 aa		5.19	□□□□□ -1.58
MSI2-216	ENST00000582772	RIC8A	Q9NPQ8	531 aa		5.19	□□□□□ -1.58
MSI2-216	ENST00000582772	ACSS2	Q9NR19	701 aa		5.19	□□□□□ -1.58
MSI2-216	ENST00000582772	DNAJC28	Q9NX36	388 aa		5.19	□□□□□ -1.58
MSI2-216	ENST00000582772	ZSWIM5	Q9P217	1185 aa		5.19	□□□□□ -1.58
MSI2-216	ENST00000582772	MAGEC2	Q9UBF1	373 aa	Predicted RBP	5.19	□□□□□ -1.58
MSI2-216	ENST00000582772	SH3BP1	Q9Y3L3	701 aa		5.19	□□□□□ -1.58
MSI2-216	ENST00000582772	LYST	Q99698	3801 aa		5.19	□□□□□ -1.58
MSI2-216	ENST00000582772	SPTY2D1-AS1	A0A0U1RR47	76 aa		5.18	□□□□□ -1.58
MSI2-216	ENST00000582772	ACKR2	O00590	384 aa		5.18	□□□□□ -1.58
MSI2-216	ENST00000582772	PCDH17	O14917	1159 aa		5.18	□□□□□ -1.58
MSI2-216	ENST00000582772	PSMD10	O75832	226 aa		5.18	□□□□□ -1.58
MSI2-216	ENST00000582772	ZWINT	O95229	277 aa		5.18	□□□□□ -1.58
MSI2-216	ENST00000582772	RAF1	P04049	648 aa		5.18	□□□□□ -1.58
MSI2-216	ENST00000582772	MS4A1	P11836	297 aa		5.18	□□□□□ -1.58
MSI2-216	ENST00000582772	GOT1	P17174	413 aa		5.18	□□□□□ -1.58
MSI2-216	ENST00000582772	PRPF4B	Q13523	1007 aa	Known RBP	5.18	□□□□□ -1.58
MSI2-216	ENST00000582772	FZD2	Q14332	565 aa		5.18	□□□□□ -1.58
MSI2-216	ENST00000582772	CST6	Q15828	149 aa		5.18	□□□□□ -1.58
MSI2-216	ENST00000582772	UGT8	Q16880	541 aa		5.18	□□□□□ -1.58
MSI2-216	ENST00000582772	RINT1	Q6NUQ1	792 aa		5.18	□□□□□ -1.58
MSI2-216	ENST00000582772	CEP85	Q6P2H3	762 aa		5.18	□□□□□ -1.58
MSI2-216	ENST00000582772	CHSY3	Q70JA7	882 aa		5.18	□□□□□ -1.58
MSI2-216	ENST00000582772	SPRED1	Q7Z699	444 aa		5.18	□□□□□ -1.58
MSI2-216	ENST00000582772	CUZD1	Q86UP6	607 aa		5.18	□□□□□ -1.58
MSI2-216	ENST00000582772	DMRTC2	Q8IXT2	367 aa	Predicted RBP	5.18	□□□□□ -1.58
MSI2-216	ENST00000582772	DCP1B	Q8IZD4	617 aa	Known RBP	5.18	□□□□□ -1.58
MSI2-216	ENST00000582772	PLD6	Q8N2A8	252 aa	Known RBP	5.18	□□□□□ -1.58
MSI2-216	ENST00000582772	AGBL5	Q8NDL9	886 aa		5.18	□□□□□ -1.58
MSI2-216	ENST00000582772	WBP2	Q969T9	261 aa		5.18	□□□□□ -1.58
MSI2-216	ENST00000582772	PGBD1	Q96JS3	809 aa		5.18	□□□□□ -1.58
MSI2-216	ENST00000582772	SPATA17	Q96L03	361 aa		5.18	□□□□□ -1.58
MSI2-216	ENST00000582772	MAP3K14	Q99558	947 aa		5.18	□□□□□ -1.58
MSI2-216	ENST00000582772	TWSG1	Q9GZX9	223 aa		5.18	□□□□□ -1.58
MSI2-216	ENST00000582772	CCDC113	Q9H0I3	377 aa		5.18	□□□□□ -1.58
MSI2-216	ENST00000582772	NEUROD4	Q9HD90	331 aa		5.18	□□□□□ -1.58
MSI2-216	ENST00000582772	RBM28	Q9NW13	759 aa	Known RBP	5.18	□□□□□ -1.58
MSI2-216	ENST00000582772	EHD2	Q9NZN4	543 aa		5.18	□□□□□ -1.58
MSI2-216	ENST00000582772	TUBGCP4	Q9UGJ1	667 aa		5.18	□□□□□ -1.58
MSI2-216	ENST00000582772	DSE	Q9UL01	958 aa		5.18	□□□□□ -1.58
MSI2-216	ENST00000582772	ARID1A	O14497	2285 aa		5.18	□□□□□ -1.58
MSI2-216	ENST00000582772	ABCA1	O95477	2261 aa		5.17	□□□□□ -1.58
MSI2-216	ENST00000582772	SEC16A	O15027	2179 aa		5.17	□□□□□ -1.58
MSI2-216	ENST00000582772	HIP1	O00291	1037 aa		5.17	□□□□□ -1.58
MSI2-216	ENST00000582772	MID1	O15344	667 aa		5.17	□□□□□ -1.58
MSI2-216	ENST00000582772	SLC7A4	O43246	635 aa		5.17	□□□□□ -1.58
MSI2-216	ENST00000582772	CHMP2A	O43633	222 aa		5.17	□□□□□ -1.58
MSI2-216	ENST00000582772	DKC1	O60832	514 aa	Known RBP eCLIP	5.17	□□□□□ -1.58	1e-8	■■■■■ 30.4
MSI2-216	ENST00000582772	GAS7	O60861	476 aa		5.17	□□□□□ -1.58
MSI2-216	ENST00000582772	RNASEH2A	O75792	299 aa	Known RBP	5.17	□□□□□ -1.58
MSI2-216	ENST00000582772	STK17B	O94768	372 aa		5.17	□□□□□ -1.58
MSI2-216	ENST00000582772	CPNE6	O95741	557 aa		5.17	□□□□□ -1.58
MSI2-216	ENST00000582772	EDN1	P05305	212 aa		5.17	□□□□□ -1.58
MSI2-216	ENST00000582772	MBL2	P11226	248 aa	Predicted RBP	5.17	□□□□□ -1.58
MSI2-216	ENST00000582772	CYP3A5	P20815	502 aa		5.17	□□□□□ -1.58
MSI2-216	ENST00000582772	MAN1A1	P33908	653 aa		5.17	□□□□□ -1.58
MSI2-216	ENST00000582772	DLST	P36957	453 aa		5.17	□□□□□ -1.58
MSI2-216	ENST00000582772	TUB	P50607	506 aa		5.17	□□□□□ -1.58
MSI2-216	ENST00000582772	CCL11	P51671	97 aa		5.17	□□□□□ -1.58
MSI2-216	ENST00000582772	TDGF1P3	P51864	188 aa		5.17	□□□□□ -1.58
MSI2-216	ENST00000582772	HAND2	P61296	217 aa		5.17	□□□□□ -1.58
MSI2-216	ENST00000582772	NKX6-1	P78426	367 aa	Predicted RBP	5.17	□□□□□ -1.58
MSI2-216	ENST00000582772	ANO6	Q4KMQ2	910 aa		5.17	□□□□□ -1.58
MSI2-216	ENST00000582772	VWA5B1	Q5TIE3	1220 aa		5.17	□□□□□ -1.58
MSI2-216	ENST00000582772	PPP1R18	Q6NYC8	613 aa		5.17	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms