RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 HHIPQ96QV1 700 aa26.7■■□□□ 1.86
NME3-208ENST00000565379 DHX35Q9H5Z1 703 aaKnown RBP26.7■■□□□ 1.86
NME3-208ENST00000565379 DDX56Q9NY93 547 aaKnown RBP26.7■■□□□ 1.86
NME3-208ENST00000565379 GMEB2Q9UKD1 530 aa26.7■■□□□ 1.86
NME3-208ENST00000565379 RAB23Q9ULC3 237 aa26.7■■□□□ 1.86
NME3-208ENST00000565379 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP26.7■■□□□ 1.86
NME3-208ENST00000565379 DNAH14Q0VDD8 3507 aa26.69■■□□□ 1.86
NME3-208ENST00000565379 A0A1B0GVM2 712 aa26.69■■□□□ 1.86
NME3-208ENST00000565379 GRID2IPA4D2P6 1211 aa26.69■■□□□ 1.86
NME3-208ENST00000565379 TCAF2A6NFQ2 919 aa26.69■■□□□ 1.86
NME3-208ENST00000565379 CLDN11O75508 207 aa26.69■■□□□ 1.86
NME3-208ENST00000565379 CDH4P55283 916 aa26.69■■□□□ 1.86
NME3-208ENST00000565379 SEC13P55735 322 aa26.69■■□□□ 1.86
NME3-208ENST00000565379 OXCT1P55809 520 aa26.69■■□□□ 1.86
NME3-208ENST00000565379 LMNB2Q03252 620 aa26.69■■□□□ 1.86
NME3-208ENST00000565379 SEMA3BQ13214 749 aa26.69■■□□□ 1.86
NME3-208ENST00000565379 PDK2Q15119 407 aa26.69■■□□□ 1.86
NME3-208ENST00000565379 C14orf80Q86SX3 495 aa26.69■■□□□ 1.86
NME3-208ENST00000565379 ZYG11BQ9C0D3 744 aa26.69■■□□□ 1.86
NME3-208ENST00000565379 STIM2Q9P246 746 aa26.69■■□□□ 1.86
NME3-208ENST00000565379 RCOR3Q9P2K3 495 aaPredicted RBP26.69■■□□□ 1.86
NME3-208ENST00000565379 FBXO10Q9UK96 956 aa26.69■■□□□ 1.86
NME3-208ENST00000565379 SRGAP2O75044 1071 aa26.68■■□□□ 1.86
NME3-208ENST00000565379 PALMO75781 387 aa26.68■■□□□ 1.86
NME3-208ENST00000565379 LRIG2O94898 1065 aa26.68■■□□□ 1.86
NME3-208ENST00000565379 TCF4P15884 667 aa26.68■■□□□ 1.86
NME3-208ENST00000565379 TGM1P22735 817 aa26.68■■□□□ 1.86
NME3-208ENST00000565379 HOXD9P28356 352 aaPredicted RBP26.68■■□□□ 1.86
NME3-208ENST00000565379 HCAR3P49019 387 aa26.68■■□□□ 1.86
NME3-208ENST00000565379 TAS2R40P59535 323 aa26.68■■□□□ 1.86
NME3-208ENST00000565379 SIM2Q14190 667 aaPredicted RBP26.68■■□□□ 1.86
NME3-208ENST00000565379 KCNT1Q5JUK3 1230 aa26.68■■□□□ 1.86
NME3-208ENST00000565379 NUDT18Q6ZVK8 323 aa26.68■■□□□ 1.86
NME3-208ENST00000565379 WDR5BQ86VZ2 330 aa26.68■■□□□ 1.86
NME3-208ENST00000565379 ETFBKMTQ8IXQ9 262 aa26.68■■□□□ 1.86
NME3-208ENST00000565379 TRIM58Q8NG06 486 aa26.68■■□□□ 1.86
NME3-208ENST00000565379 HSPH1Q92598 858 aa26.68■■□□□ 1.86
NME3-208ENST00000565379 IGSF8Q969P0 613 aa26.68■■□□□ 1.86
NME3-208ENST00000565379 CATSPERBQ9H7T0 1116 aa26.68■■□□□ 1.86
NME3-208ENST00000565379 STAU2Q9NUL3 570 aaKnown RBP eCLIP26.68■■□□□ 1.86
NME3-208ENST00000565379 AMFRQ9UKV5 643 aa26.68■■□□□ 1.86
NME3-208ENST00000565379 K7EQS6 105 aa26.67■■□□□ 1.86
NME3-208ENST00000565379 FGF10O15520 208 aaPredicted RBP26.67■■□□□ 1.86
NME3-208ENST00000565379 ARL4AP40617 200 aa26.67■■□□□ 1.86
NME3-208ENST00000565379 RPS24P62847 133 aaKnown RBP26.67■■□□□ 1.86
NME3-208ENST00000565379 SMTNL2Q2TAL5 461 aa26.67■■□□□ 1.86
NME3-208ENST00000565379 PEX26Q7Z412 305 aa26.67■■□□□ 1.86
NME3-208ENST00000565379 VSIG1Q86XK7 387 aa26.67■■□□□ 1.86
NME3-208ENST00000565379 REXO1L1PQ8IX06 675 aa26.67■■□□□ 1.86
NME3-208ENST00000565379 FAM71BQ8TC56 605 aa26.67■■□□□ 1.86
NME3-208ENST00000565379 TRIM44Q96DX7 344 aaPredicted RBP26.67■■□□□ 1.86
NME3-208ENST00000565379 DEC1Q9P2X7 70 aa26.67■■□□□ 1.86
NME3-208ENST00000565379 SLC8A2Q9UPR5 921 aa26.67■■□□□ 1.86
NME3-208ENST00000565379 SNX10Q9Y5X0 201 aa26.67■■□□□ 1.86
NME3-208ENST00000565379 SPTBN2O15020 2390 aa26.66■■□□□ 1.86
NME3-208ENST00000565379 EML5Q05BV3 1969 aa26.66■■□□□ 1.86
NME3-208ENST00000565379 NCOR2Q9Y618 2525 aa26.66■■□□□ 1.86
NME3-208ENST00000565379 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP26.66■■□□□ 1.86
NME3-208ENST00000565379 CCDC66A2RUB6 948 aa26.66■■□□□ 1.86
NME3-208ENST00000565379 MIF4GDA9UHW6 222 aaKnown RBP26.66■■□□□ 1.86
NME3-208ENST00000565379 H3BRJ5 948 aa26.66■■□□□ 1.86
NME3-208ENST00000565379 CREB3O43889 395 aa26.66■■□□□ 1.86
NME3-208ENST00000565379 LUC7L3O95232 432 aaKnown RBP26.66■■□□□ 1.86
NME3-208ENST00000565379 CHRM1P11229 460 aaPredicted RBP26.66■■□□□ 1.86
NME3-208ENST00000565379 RHOQP17081 205 aa26.66■■□□□ 1.86
NME3-208ENST00000565379 HOXA6P31267 233 aa26.66■■□□□ 1.86
NME3-208ENST00000565379 GGCXP38435 758 aa26.66■■□□□ 1.86
NME3-208ENST00000565379 SGSHP51688 502 aa26.66■■□□□ 1.86
NME3-208ENST00000565379 TPI1P60174 286 aa26.66■■□□□ 1.86
NME3-208ENST00000565379 KDSRQ06136 332 aa26.66■■□□□ 1.86
NME3-208ENST00000565379 ZNF177Q13360 481 aaPredicted RBP26.66■■□□□ 1.86
NME3-208ENST00000565379 KRT81Q14533 505 aa26.66■■□□□ 1.86
NME3-208ENST00000565379 ODF2Q5BJF6 829 aa26.66■■□□□ 1.86
NME3-208ENST00000565379 ZFYVE27Q5T4F4 411 aa26.66■■□□□ 1.86
NME3-208ENST00000565379 TXNRD3NBQ6F5E7 133 aa26.66■■□□□ 1.86
NME3-208ENST00000565379 LAIR1Q6GTX8 287 aa26.66■■□□□ 1.86
NME3-208ENST00000565379 MFN1Q8IWA4 741 aa26.66■■□□□ 1.86
NME3-208ENST00000565379 PYROXD2Q8N2H3 581 aa26.66■■□□□ 1.86
NME3-208ENST00000565379 KCTD6Q8NC69 237 aa26.66■■□□□ 1.86
NME3-208ENST00000565379 FIBINQ8TAL6 211 aa26.66■■□□□ 1.86
NME3-208ENST00000565379 KCTD15Q96SI1 283 aaPredicted RBP26.66■■□□□ 1.86
NME3-208ENST00000565379 ZDHHC4Q9NPG8 344 aa26.66■■□□□ 1.86
NME3-208ENST00000565379 KCND1Q9NSA2 647 aa26.66■■□□□ 1.86
NME3-208ENST00000565379 GPATCH2LQ9NWQ4 482 aa26.66■■□□□ 1.86
NME3-208ENST00000565379 PLK2Q9NYY3 685 aa26.66■■□□□ 1.86
NME3-208ENST00000565379 PYCARDQ9ULZ3 195 aa26.66■■□□□ 1.86
NME3-208ENST00000565379 CAPN6Q9Y6Q1 641 aa26.66■■□□□ 1.86
NME3-208ENST00000565379 FAM72CH0Y354 149 aa26.65■■□□□ 1.86
NME3-208ENST00000565379 EEF2KO00418 725 aaKnown RBP26.65■■□□□ 1.86
NME3-208ENST00000565379 TULP3O75386 442 aa26.65■■□□□ 1.86
NME3-208ENST00000565379 MSNP26038 577 aaKnown RBP26.65■■□□□ 1.86
NME3-208ENST00000565379 EPHB2P29323 1055 aa26.65■■□□□ 1.86
NME3-208ENST00000565379 DGKGP49619 791 aa26.65■■□□□ 1.86
NME3-208ENST00000565379 CDH6P55285 790 aa26.65■■□□□ 1.86
NME3-208ENST00000565379 CDH18Q13634 790 aa26.65■■□□□ 1.86
NME3-208ENST00000565379 CA9Q16790 459 aa26.65■■□□□ 1.86
NME3-208ENST00000565379 C2orf27AQ580R0 203 aa26.65■■□□□ 1.86
NME3-208ENST00000565379 PPP6R3Q5H9R7 873 aaPredicted RBP26.65■■□□□ 1.86
NME3-208ENST00000565379 FAM72AQ5TYM5 149 aa26.65■■□□□ 1.86
NME3-208ENST00000565379 FAM72DQ6L9T8 149 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms