RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 ERLEC1Q96DZ1 483 aa7.76□□□□□ -1.17
SPG11-213ENST00000558988 EEF2KMTQ96G04 330 aa7.76□□□□□ -1.17
SPG11-213ENST00000558988 SLITRK1Q96PX8 696 aa7.76□□□□□ -1.17
SPG11-213ENST00000558988 KCNK16Q96T55 309 aa7.76□□□□□ -1.17
SPG11-213ENST00000558988 ELOVL4Q9GZR5 314 aa7.76□□□□□ -1.17
SPG11-213ENST00000558988 RNF38Q9H0F5 515 aa7.76□□□□□ -1.17
SPG11-213ENST00000558988 SDCBP2Q9H190 292 aa7.76□□□□□ -1.17
SPG11-213ENST00000558988 GCNT4Q9P109 453 aa7.76□□□□□ -1.17
SPG11-213ENST00000558988 CHORDC1Q9UHD1 332 aaPredicted RBP7.76□□□□□ -1.17
SPG11-213ENST00000558988 PPM1HQ9ULR3 514 aa7.76□□□□□ -1.17
SPG11-213ENST00000558988 FRMD4BQ9Y2L6 1034 aa7.76□□□□□ -1.17
SPG11-213ENST00000558988 RALGAPA1Q6GYQ0 2036 aa7.76□□□□□ -1.17
SPG11-213ENST00000558988 ANAPC1Q9H1A4 1944 aa7.76□□□□□ -1.17
SPG11-213ENST00000558988 SPTBN4Q9H254 2564 aa7.75□□□□□ -1.17
SPG11-213ENST00000558988 MYH10P35580 1976 aa7.75□□□□□ -1.17
SPG11-213ENST00000558988 ZNF840PA6NDX5 716 aa7.75□□□□□ -1.17
SPG11-213ENST00000558988 ANTXRLA6NF34 631 aa7.75□□□□□ -1.17
SPG11-213ENST00000558988 TRDMT1O14717 391 aaKnown RBP7.75□□□□□ -1.17
SPG11-213ENST00000558988 CALUO43852 315 aaPredicted RBP7.75□□□□□ -1.17
SPG11-213ENST00000558988 ATG13O75143 517 aa7.75□□□□□ -1.17
SPG11-213ENST00000558988 TACC1O75410 805 aa7.75□□□□□ -1.17
SPG11-213ENST00000558988 RPP40O75818 363 aaKnown RBP7.75□□□□□ -1.17
SPG11-213ENST00000558988 VNN1O95497 513 aa7.75□□□□□ -1.17
SPG11-213ENST00000558988 MSL3P1P0C860 447 aa7.75□□□□□ -1.17
SPG11-213ENST00000558988 PFKLP17858 780 aa7.75□□□□□ -1.17
SPG11-213ENST00000558988 CD58P19256 250 aa7.75□□□□□ -1.17
SPG11-213ENST00000558988 CMA1P23946 247 aa7.75□□□□□ -1.17
SPG11-213ENST00000558988 YWHAQP27348 245 aa7.75□□□□□ -1.17
SPG11-213ENST00000558988 ATICP31939 592 aa7.75□□□□□ -1.17
SPG11-213ENST00000558988 GBP1P32455 592 aa7.75□□□□□ -1.17
SPG11-213ENST00000558988 PDE6CP51160 858 aa7.75□□□□□ -1.17
SPG11-213ENST00000558988 NDUFA8P51970 172 aa7.75□□□□□ -1.17
SPG11-213ENST00000558988 DGKEP52429 567 aa7.75□□□□□ -1.17
SPG11-213ENST00000558988 NDST1P52848 882 aa7.75□□□□□ -1.17
SPG11-213ENST00000558988 SNRPFP62306 86 aaKnown RBP7.75□□□□□ -1.17
SPG11-213ENST00000558988 ZXDBP98169 803 aa7.75□□□□□ -1.17
SPG11-213ENST00000558988 ZNF268Q14587 947 aaPredicted RBP7.75□□□□□ -1.17
SPG11-213ENST00000558988 CLEC16AQ2KHT3 1053 aa7.75□□□□□ -1.17
SPG11-213ENST00000558988 RNF111Q6ZNA4 994 aa7.75□□□□□ -1.17
SPG11-213ENST00000558988 LIMS2Q7Z4I7 341 aa7.75□□□□□ -1.17
SPG11-213ENST00000558988 KBTBD6Q86V97 674 aa7.75□□□□□ -1.17
SPG11-213ENST00000558988 SYNPOQ8N3V7 929 aa7.75□□□□□ -1.17
SPG11-213ENST00000558988 SCAMP5Q8TAC9 235 aa7.75□□□□□ -1.17
SPG11-213ENST00000558988 SLC2A14Q8TDB8 520 aa7.75□□□□□ -1.17
SPG11-213ENST00000558988 PARD3BQ8TEW8 1205 aa7.75□□□□□ -1.17
SPG11-213ENST00000558988 RNF141Q8WVD5 230 aa7.75□□□□□ -1.17
SPG11-213ENST00000558988 EXOC4Q96A65 974 aa7.75□□□□□ -1.17
SPG11-213ENST00000558988 ALKBH8Q96BT7 664 aaKnown RBP7.75□□□□□ -1.17
SPG11-213ENST00000558988 SPATA17Q96L03 361 aa7.75□□□□□ -1.17
SPG11-213ENST00000558988 C8orf48Q96LL4 319 aa7.75□□□□□ -1.17
SPG11-213ENST00000558988 ZNF747Q9BV97 191 aa7.75□□□□□ -1.17
SPG11-213ENST00000558988 TPSD1Q9BZJ3 242 aa7.75□□□□□ -1.17
SPG11-213ENST00000558988 SMOC1Q9H4F8 434 aa7.75□□□□□ -1.17
SPG11-213ENST00000558988 DMAP1Q9NPF5 467 aaPredicted RBP7.75□□□□□ -1.17
SPG11-213ENST00000558988 ZDHHC4Q9NPG8 344 aa7.75□□□□□ -1.17
SPG11-213ENST00000558988 SEMA4GQ9NTN9 838 aa7.75□□□□□ -1.17
SPG11-213ENST00000558988 EHD2Q9NZN4 543 aa7.75□□□□□ -1.17
SPG11-213ENST00000558988 GMIPQ9P107 970 aa7.75□□□□□ -1.17
SPG11-213ENST00000558988 CGNQ9P2M7 1197 aaKnown RBP7.75□□□□□ -1.17
SPG11-213ENST00000558988 HMGXB4Q9UGU5 601 aa7.75□□□□□ -1.17
SPG11-213ENST00000558988 DCTN4Q9UJW0 460 aa7.75□□□□□ -1.17
SPG11-213ENST00000558988 ARHGAP26Q9UNA1 814 aa7.75□□□□□ -1.17
SPG11-213ENST00000558988 ZDHHC9Q9Y397 364 aa7.75□□□□□ -1.17
SPG11-213ENST00000558988 PTPRDP23468 1912 aa7.75□□□□□ -1.17
SPG11-213ENST00000558988 HELZP42694 1942 aaKnown RBP7.75□□□□□ -1.17
SPG11-213ENST00000558988 GREB1Q4ZG55 1949 aa7.75□□□□□ -1.17
SPG11-213ENST00000558988 DCLK1O15075 740 aa7.74□□□□□ -1.17
SPG11-213ENST00000558988 HLA-DRAP01903 254 aa7.74□□□□□ -1.17
SPG11-213ENST00000558988 C4BPAP04003 597 aaKnown RBP7.74□□□□□ -1.17
SPG11-213ENST00000558988 CYP17A1P05093 508 aa7.74□□□□□ -1.17
SPG11-213ENST00000558988 RETP07949 1114 aa7.74□□□□□ -1.17
SPG11-213ENST00000558988 KRT13P13646 458 aa7.74□□□□□ -1.17
SPG11-213ENST00000558988 P4HA1P13674 534 aa7.74□□□□□ -1.17
SPG11-213ENST00000558988 DRD1P21728 446 aa7.74□□□□□ -1.17
SPG11-213ENST00000558988 NR2F2P24468 414 aa7.74□□□□□ -1.17
SPG11-213ENST00000558988 ARL4AP40617 200 aa7.74□□□□□ -1.17
SPG11-213ENST00000558988 SLC6A11P48066 632 aa7.74□□□□□ -1.17
SPG11-213ENST00000558988 GCLMP48507 274 aa7.74□□□□□ -1.17
SPG11-213ENST00000558988 VAMP7P51809 220 aa7.74□□□□□ -1.17
SPG11-213ENST00000558988 SLC5A3P53794 718 aa7.74□□□□□ -1.17
SPG11-213ENST00000558988 MAP3K7CLP57077 242 aa7.74□□□□□ -1.17
SPG11-213ENST00000558988 NOP14P78316 857 aaKnown RBP7.74□□□□□ -1.17
SPG11-213ENST00000558988 KLF10Q13118 480 aa7.74□□□□□ -1.17
SPG11-213ENST00000558988 DMC1Q14565 340 aa7.74□□□□□ -1.17
SPG11-213ENST00000558988 SF3A2Q15428 464 aaKnown RBP7.74□□□□□ -1.17
SPG11-213ENST00000558988 AASDHQ4L235 1098 aaPredicted RBP7.74□□□□□ -1.17
SPG11-213ENST00000558988 ZNF394Q53GI3 561 aa7.74□□□□□ -1.17
SPG11-213ENST00000558988 ANO7Q6IWH7 933 aa7.74□□□□□ -1.17
SPG11-213ENST00000558988 WDR5BQ86VZ2 330 aa7.74□□□□□ -1.17
SPG11-213ENST00000558988 SFTPA1Q8IWL2 248 aa7.74□□□□□ -1.17
SPG11-213ENST00000558988 C12orf56Q8IXR9 622 aa7.74□□□□□ -1.17
SPG11-213ENST00000558988 FAM186BQ8IYM0 893 aa7.74□□□□□ -1.17
SPG11-213ENST00000558988 NUP93Q8N1F7 819 aa7.74□□□□□ -1.17
SPG11-213ENST00000558988 NAT16Q8N8M0 369 aa7.74□□□□□ -1.17
SPG11-213ENST00000558988 C12orf29Q8N999 325 aa7.74□□□□□ -1.17
SPG11-213ENST00000558988 TSTD1Q8NFU3 115 aa7.74□□□□□ -1.17
SPG11-213ENST00000558988 GAB3Q8WWW8 586 aa7.74□□□□□ -1.17
SPG11-213ENST00000558988 SMARCD1Q96GM5 515 aa7.74□□□□□ -1.17
SPG11-213ENST00000558988 TNIP3Q96KP6 325 aa7.74□□□□□ -1.17
SPG11-213ENST00000558988 RBCK1Q9BYM8 510 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms