RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 KIFC3Q9BVG8 833 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 TMEM120AQ9BXJ8 343 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 MTMR12Q9C0I1 747 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 NXF2Q9GZY0 626 aaKnown RBP3.53□□□□□ -1.84
SEC23A-207ENST00000554615 TNKS2Q9H2K2 1166 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 PLEKHA4Q9H4M7 779 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 PCIF1Q9H4Z3 704 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 ZBTB26Q9HCK0 441 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 USE1Q9NZ43 259 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 COPG2Q9UBF2 871 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 SLC7A8Q9UHI5 535 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 C2orf16Q68DN1 1984 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 TRBV5-4A0A0C4DH59 114 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 SMIM31A0A1B0GVY4 71 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 TCAF2A6NFQ2 919 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 SPTLC1O15269 473 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 LPXNO60711 386 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 DNAJB5O75953 348 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 KLHL2O95198 593 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 EPOP01588 193 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 RB1P06400 928 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 DARSP14868 501 aaKnown RBP3.53□□□□□ -1.84
SEC23A-207ENST00000554615 ANPEPP15144 967 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 HOXB8P17481 243 aaPredicted RBP3.53□□□□□ -1.84
SEC23A-207ENST00000554615 CR2P20023 1033 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 FDXRP22570 491 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 ADRA1DP25100 572 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 RPL9P32969 192 aaKnown RBP3.53□□□□□ -1.84
SEC23A-207ENST00000554615 ELK3P41970 407 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 CSNK1DP48730 415 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 RAB27AP51159 221 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 RBP5P82980 135 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 ROR1Q01973 937 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 ROR2Q01974 943 aaKnown RBP3.53□□□□□ -1.84
SEC23A-207ENST00000554615 ZNF33BQ06732 778 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 SNX1Q13596 522 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 SPIDRQ14159 915 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 GK3PQ14409 553 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 RAB6CQ53S08 254 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 TECRLQ5HYJ1 363 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 WDR44Q5JSH3 913 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 BRMS1LQ5PSV4 323 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 FAM102BQ5T8I3 360 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 MAP3K21Q5TCX8 1036 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 SPRYD7Q5W111 196 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 DNAJC24Q6P3W2 148 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 SLC27A1Q6PCB7 646 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 KLHDC10Q6PID8 442 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 LARP4Q71RC2 724 aaKnown RBP eCLIP3.53□□□□□ -1.84
SEC23A-207ENST00000554615 OSTM1Q86WC4 334 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 CALHM3Q86XJ0 350 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 FBXW8Q8N3Y1 598 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 MINDY1Q8N5J2 469 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 FBXO22Q8NEZ5 403 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 ADCY4Q8NFM4 1077 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 DIS3LQ8TF46 1054 aaKnown RBP3.53□□□□□ -1.84
SEC23A-207ENST00000554615 ZNF764Q96H86 408 aaPredicted RBP3.53□□□□□ -1.84
SEC23A-207ENST00000554615 PWWP2AQ96N64 755 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 ZNF599Q96NL3 588 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 RUFY1Q96T51 708 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 ELAC2Q9BQ52 826 aaKnown RBP3.53□□□□□ -1.84
SEC23A-207ENST00000554615 SLX1AQ9BQ83 275 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 TUBA1CQ9BQE3 449 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 PI4K2AQ9BTU6 479 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 TARS2Q9BW92 718 aaKnown RBP3.53□□□□□ -1.84
SEC23A-207ENST00000554615 RAB6CQ9H0N0 254 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 CHST8Q9H2A9 424 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 RC3H2Q9HBD1 1191 aaKnown RBP3.53□□□□□ -1.84
SEC23A-207ENST00000554615 CNGB3Q9NQW8 809 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 DUS2Q9NX74 493 aaKnown RBP3.53□□□□□ -1.84
SEC23A-207ENST00000554615 ERAP1Q9NZ08 941 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 TMOD2Q9NZR1 351 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 XPO7Q9UIA9 1087 aaKnown RBP3.53□□□□□ -1.84
SEC23A-207ENST00000554615 B3GNT3Q9Y2A9 372 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 PCDHGA7Q9Y5G6 932 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 A0A087X1B8 175 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 BBIP1A8MTZ0 92 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 ARNTLO00327 626 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 KPNA6O60684 536 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 ZSCAN5DPP0CG00 497 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 SLC35E2BP0CK96 405 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 PYGBP11216 843 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 KRT3P12035 628 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 BRD2P25440 801 aaKnown RBP3.53□□□□□ -1.84
SEC23A-207ENST00000554615 PTPN3P26045 913 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 TKTP29401 623 aaKnown RBP3.53□□□□□ -1.84
SEC23A-207ENST00000554615 EPS15P42566 896 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 MATR3P43243 847 aaKnown RBP eCLIP3.53□□□□□ -1.84
SEC23A-207ENST00000554615 LIG4P49917 911 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 DAOAP59103 153 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 PDIA2Q13087 525 aaKnown RBP3.53□□□□□ -1.84
SEC23A-207ENST00000554615 TAF5Q15542 800 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 PTPROQ16827 1216 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 HSDL1Q3SXM5 330 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 KBTBD12Q3ZCT8 623 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 KCTD21Q4G0X4 260 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 NHSL2Q5HYW2 709 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 RNLSQ5VYX0 342 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 FBXL19Q6PCT2 694 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 XKR5Q6UX68 686 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms