RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 TMEM132BQ14DG7 1078 aa15.7■□□□□ 0.1
SDF4-207ENST00000494748 PMF1Q6P1K2 205 aa15.7■□□□□ 0.1
SDF4-207ENST00000494748 CASC4Q6P4E1 433 aa15.7■□□□□ 0.1
SDF4-207ENST00000494748 ACVR1CQ8NER5 493 aa15.7■□□□□ 0.1
SDF4-207ENST00000494748 ZNF597Q96LX8 424 aa15.7■□□□□ 0.1
SDF4-207ENST00000494748 RANBP9Q96S59 729 aa15.7■□□□□ 0.1
SDF4-207ENST00000494748 SERPINI1Q99574 410 aa15.7■□□□□ 0.1
SDF4-207ENST00000494748 RBBP8Q99708 897 aa15.7■□□□□ 0.1
SDF4-207ENST00000494748 GATA5Q9BWX5 397 aaPredicted RBP15.7■□□□□ 0.1
SDF4-207ENST00000494748 VRTNQ9H8Y1 702 aa15.7■□□□□ 0.1
SDF4-207ENST00000494748 TSPAN16Q9UKR8 245 aa15.7■□□□□ 0.1
SDF4-207ENST00000494748 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.7■□□□□ 0.1
SDF4-207ENST00000494748 A0A0A0MRY4 1105 aa15.69■□□□□ 0.1
SDF4-207ENST00000494748 HSPA4LO95757 839 aa15.69■□□□□ 0.1
SDF4-207ENST00000494748 ITGB3P05106 788 aa15.69■□□□□ 0.1
SDF4-207ENST00000494748 GP5P40197 560 aa15.69■□□□□ 0.1
SDF4-207ENST00000494748 MLH1P40692 756 aa15.69■□□□□ 0.1
SDF4-207ENST00000494748 HSPA13P48723 471 aa15.69■□□□□ 0.1
SDF4-207ENST00000494748 RGS7P49802 495 aa15.69■□□□□ 0.1
SDF4-207ENST00000494748 SESN2P58004 480 aaPredicted RBP15.69■□□□□ 0.1
SDF4-207ENST00000494748 INCA1Q0VD86 236 aa15.69■□□□□ 0.1
SDF4-207ENST00000494748 DLG2Q15700 870 aa15.69■□□□□ 0.1
SDF4-207ENST00000494748 ERI1Q8IV48 349 aaKnown RBP15.69■□□□□ 0.1
SDF4-207ENST00000494748 CDKL2Q92772 493 aa15.69■□□□□ 0.1
SDF4-207ENST00000494748 HSPBAP1Q96EW2 488 aa15.69■□□□□ 0.1
SDF4-207ENST00000494748 HEXIM2Q96MH2 286 aaKnown RBP15.69■□□□□ 0.1
SDF4-207ENST00000494748 SPATA13Q96N96 652 aa15.69■□□□□ 0.1
SDF4-207ENST00000494748 KCTD15Q96SI1 283 aaPredicted RBP15.69■□□□□ 0.1
SDF4-207ENST00000494748 SLC4A5Q9BY07 1137 aa15.69■□□□□ 0.1
SDF4-207ENST00000494748 EIF2B3Q9NR50 452 aaKnown RBP15.69■□□□□ 0.1
SDF4-207ENST00000494748 CROCCQ5TZA2 2017 aa15.69■□□□□ 0.1
SDF4-207ENST00000494748 CDK9P50750 372 aaKnown RBP15.69■□□□□ 0.1
SDF4-207ENST00000494748 LPIN1Q14693 890 aa15.69■□□□□ 0.1
SDF4-207ENST00000494748 ACBD5Q5T8D3 534 aaPredicted RBP15.69■□□□□ 0.1
SDF4-207ENST00000494748 TMEM198Q66K66 360 aa15.69■□□□□ 0.1
SDF4-207ENST00000494748 FNDC8Q8TC99 324 aa15.69■□□□□ 0.1
SDF4-207ENST00000494748 CSPG4P5Q96PW8 444 aa15.69■□□□□ 0.1
SDF4-207ENST00000494748 PLXNA1Q9UIW2 1896 aa15.69■□□□□ 0.1
SDF4-207ENST00000494748 NR2C2P49116 596 aa15.69■□□□□ 0.1
SDF4-207ENST00000494748 OLIG2Q13516 323 aa15.69■□□□□ 0.1
SDF4-207ENST00000494748 LRRC43Q8N309 656 aa15.69■□□□□ 0.1
SDF4-207ENST00000494748 C12orf29Q8N999 325 aa15.69■□□□□ 0.1
SDF4-207ENST00000494748 HTR3CQ8WXA8 447 aa15.69■□□□□ 0.1
SDF4-207ENST00000494748 DLG3Q92796 817 aa15.69■□□□□ 0.1
SDF4-207ENST00000494748 RSL24D1Q9UHA3 163 aaKnown RBP15.69■□□□□ 0.1
SDF4-207ENST00000494748 SLC22A2O15244 555 aa15.68■□□□□ 0.1
SDF4-207ENST00000494748 FARP2O94887 1054 aaPredicted RBP15.68■□□□□ 0.1
SDF4-207ENST00000494748 IQCF3P0C7M6 154 aa15.68■□□□□ 0.1
SDF4-207ENST00000494748 DESP17661 470 aa15.68■□□□□ 0.1
SDF4-207ENST00000494748 ATXN3P54252 364 aaPredicted RBP15.68■□□□□ 0.1
SDF4-207ENST00000494748 CTBSQ01459 385 aa15.68■□□□□ 0.1
SDF4-207ENST00000494748 RFTN1Q14699 578 aaPredicted RBP15.68■□□□□ 0.1
SDF4-207ENST00000494748 IL23RQ5VWK5 629 aa15.68■□□□□ 0.1
SDF4-207ENST00000494748 FSTL4Q6MZW2 842 aa15.68■□□□□ 0.1
SDF4-207ENST00000494748 BBS5Q8N3I7 341 aa15.68■□□□□ 0.1
SDF4-207ENST00000494748 RNF149Q8NC42 400 aa15.68■□□□□ 0.1
SDF4-207ENST00000494748 PDCD6IPQ8WUM4 868 aaKnown RBP15.68■□□□□ 0.1
SDF4-207ENST00000494748 CERS2Q96G23 380 aa15.68■□□□□ 0.1
SDF4-207ENST00000494748 LGMNQ99538 433 aa15.68■□□□□ 0.1
SDF4-207ENST00000494748 CPNE1Q99829 537 aa15.68■□□□□ 0.1
SDF4-207ENST00000494748 CDT1Q9H211 546 aa15.68■□□□□ 0.1
SDF4-207ENST00000494748 CAB39LQ9H9S4 337 aa15.68■□□□□ 0.1
SDF4-207ENST00000494748 WDR41Q9HAD4 459 aa15.68■□□□□ 0.1
SDF4-207ENST00000494748 OLAHQ9NV23 265 aa15.68■□□□□ 0.1
SDF4-207ENST00000494748 CTDP1Q9Y5B0 961 aaPredicted RBP15.68■□□□□ 0.1
SDF4-207ENST00000494748 TCAF2A6NFQ2 919 aa15.68■□□□□ 0.1
SDF4-207ENST00000494748 TOMM70O94826 608 aa15.68■□□□□ 0.1
SDF4-207ENST00000494748 P4HA1P13674 534 aa15.68■□□□□ 0.1
SDF4-207ENST00000494748 HSPA1LP34931 641 aa15.68■□□□□ 0.1
SDF4-207ENST00000494748 NDST1P52848 882 aa15.68■□□□□ 0.1
SDF4-207ENST00000494748 PPIDQ08752 370 aaKnown RBP15.68■□□□□ 0.1
SDF4-207ENST00000494748 GRTP1Q5TC63 336 aa15.68■□□□□ 0.1
SDF4-207ENST00000494748 JADE1Q6IE81 842 aa15.68■□□□□ 0.1
SDF4-207ENST00000494748 ELMSAN1Q6PJG2 1045 aa15.68■□□□□ 0.1
SDF4-207ENST00000494748 MAMDC4Q6UXC1 1216 aa15.68■□□□□ 0.1
SDF4-207ENST00000494748 DPH6Q7L8W6 267 aa15.68■□□□□ 0.1
SDF4-207ENST00000494748 TTC30AQ86WT1 665 aa15.68■□□□□ 0.1
SDF4-207ENST00000494748 COLGALT1Q8NBJ5 622 aa15.68■□□□□ 0.1
SDF4-207ENST00000494748 FAM156AQ8NDB6 213 aa15.68■□□□□ 0.1
SDF4-207ENST00000494748 TSPAN14Q8NG11 270 aa15.68■□□□□ 0.1
SDF4-207ENST00000494748 CEP70Q8NHQ1 597 aa15.68■□□□□ 0.1
SDF4-207ENST00000494748 PPP1R14BQ96C90 147 aa15.68■□□□□ 0.1
SDF4-207ENST00000494748 MAML3Q96JK9 1138 aa15.68■□□□□ 0.1
SDF4-207ENST00000494748 OXSMQ9NWU1 459 aa15.68■□□□□ 0.1
SDF4-207ENST00000494748 NME7Q9Y5B8 376 aa15.68■□□□□ 0.1
SDF4-207ENST00000494748 CITO14578 2027 aa15.68■□□□□ 0.1
SDF4-207ENST00000494748 LACTBL1A8MY62 500 aa15.68■□□□□ 0.1
SDF4-207ENST00000494748 NEMP1O14524 444 aa15.68■□□□□ 0.1
SDF4-207ENST00000494748 PAPSS1O43252 624 aaPredicted RBP15.68■□□□□ 0.1
SDF4-207ENST00000494748 UBA1P22314 1058 aaKnown RBP15.68■□□□□ 0.1
SDF4-207ENST00000494748 PPARGP37231 505 aaPredicted RBP15.68■□□□□ 0.1
SDF4-207ENST00000494748 LIMK2P53671 638 aa15.68■□□□□ 0.1
SDF4-207ENST00000494748 HERC3Q15034 1050 aa15.68■□□□□ 0.1
SDF4-207ENST00000494748 ADRM1Q16186 407 aa15.68■□□□□ 0.1
SDF4-207ENST00000494748 TREML2Q5T2D2 321 aa15.68■□□□□ 0.1
SDF4-207ENST00000494748 HEATR6Q6AI08 1181 aaKnown RBP15.68■□□□□ 0.1
SDF4-207ENST00000494748 MIPOL1Q8TD10 442 aa15.68■□□□□ 0.1
SDF4-207ENST00000494748 NLRP7Q8WX94 980 aa15.68■□□□□ 0.1
SDF4-207ENST00000494748 CENPIQ92674 756 aaPredicted RBP15.68■□□□□ 0.1
SDF4-207ENST00000494748 SLCO4A1Q96BD0 722 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms