RNA–Protein interactions for RNA: ENST00000471667.5

LRCH3-213, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 586 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-213ENST00000471667 SATB2Q9UPW6 733 aa3.92□□□□□ -1.78
LRCH3-213ENST00000471667 PCDHB6Q9Y5E3 794 aa3.92□□□□□ -1.78
LRCH3-213ENST00000471667 UBIAD1Q9Y5Z9 338 aa3.92□□□□□ -1.78
LRCH3-213ENST00000471667 FN1P02751 2386 aaKnown RBP3.92□□□□□ -1.78
LRCH3-213ENST00000471667 PCSK5Q92824 1860 aa3.92□□□□□ -1.78
LRCH3-213ENST00000471667 NBEAL1Q6ZS30 2694 aa3.91□□□□□ -1.78
LRCH3-213ENST00000471667 A0A1B0GTQ1 180 aa3.91□□□□□ -1.78
LRCH3-213ENST00000471667 NPEPPSL1A6NEC2 478 aa3.91□□□□□ -1.78
LRCH3-213ENST00000471667 SYN3O14994 580 aa3.91□□□□□ -1.78
LRCH3-213ENST00000471667 RNF113AO15541 343 aaKnown RBP3.91□□□□□ -1.78
LRCH3-213ENST00000471667 PRPF3O43395 683 aaKnown RBP3.91□□□□□ -1.78
LRCH3-213ENST00000471667 KAT7O95251 611 aa3.91□□□□□ -1.78
LRCH3-213ENST00000471667 ITGA2BP08514 1039 aa3.91□□□□□ -1.78
LRCH3-213ENST00000471667 LIPCP11150 499 aa3.91□□□□□ -1.78
LRCH3-213ENST00000471667 ATP5JP18859 108 aa3.91□□□□□ -1.78
LRCH3-213ENST00000471667 CAPN3P20807 821 aa3.91□□□□□ -1.78
LRCH3-213ENST00000471667 MARCKSP29966 332 aaPredicted RBP3.91□□□□□ -1.78
LRCH3-213ENST00000471667 EIF2DP41214 584 aaKnown RBP3.91□□□□□ -1.78
LRCH3-213ENST00000471667 GRIA2P42262 883 aa3.91□□□□□ -1.78
LRCH3-213ENST00000471667 MLLT10P55197 1068 aa3.91□□□□□ -1.78
LRCH3-213ENST00000471667 CLCA4Q14CN2 919 aa3.91□□□□□ -1.78
LRCH3-213ENST00000471667 C14orf28Q4W4Y0 310 aa3.91□□□□□ -1.78
LRCH3-213ENST00000471667 SLC45A4Q5BKX6 768 aa3.91□□□□□ -1.78
LRCH3-213ENST00000471667 STXBP5Q5T5C0 1151 aa3.91□□□□□ -1.78
LRCH3-213ENST00000471667 EGFLAMQ63HQ2 1017 aa3.91□□□□□ -1.78
LRCH3-213ENST00000471667 E4F1Q66K89 784 aaPredicted RBP3.91□□□□□ -1.78
LRCH3-213ENST00000471667 CRIP3Q6Q6R5 217 aa3.91□□□□□ -1.78
LRCH3-213ENST00000471667 ABHD15Q6UXT9 468 aa3.91□□□□□ -1.78
LRCH3-213ENST00000471667 MFSD6Q6ZSS7 791 aa3.91□□□□□ -1.78
LRCH3-213ENST00000471667 GATAD2AQ86YP4 633 aa3.91□□□□□ -1.78
LRCH3-213ENST00000471667 CCDC103Q8IW40 242 aa3.91□□□□□ -1.78
LRCH3-213ENST00000471667 CHPFQ8IZ52 775 aa3.91□□□□□ -1.78
LRCH3-213ENST00000471667 Q8N1X5 172 aa3.91□□□□□ -1.78
LRCH3-213ENST00000471667 GLIS1Q8NBF1 620 aa3.91□□□□□ -1.78
LRCH3-213ENST00000471667 CHDHQ8NE62 594 aaPredicted RBP3.91□□□□□ -1.78
LRCH3-213ENST00000471667 APPL2Q8NEU8 664 aa3.91□□□□□ -1.78
LRCH3-213ENST00000471667 WDR36Q8NI36 951 aaKnown RBP3.91□□□□□ -1.78
LRCH3-213ENST00000471667 CPT1CQ8TCG5 803 aa3.91□□□□□ -1.78
LRCH3-213ENST00000471667 MRPS31Q92665 395 aaKnown RBP3.91□□□□□ -1.78
LRCH3-213ENST00000471667 RABGGTAQ92696 567 aa3.91□□□□□ -1.78
LRCH3-213ENST00000471667 DIO2Q92813 273 aa3.91□□□□□ -1.78
LRCH3-213ENST00000471667 HVCN1Q96D96 273 aa3.91□□□□□ -1.78
LRCH3-213ENST00000471667 MBD6Q96DN6 1003 aa3.91□□□□□ -1.78
LRCH3-213ENST00000471667 ERLEC1Q96DZ1 483 aa3.91□□□□□ -1.78
LRCH3-213ENST00000471667 RRP36Q96EU6 259 aaKnown RBP3.91□□□□□ -1.78
LRCH3-213ENST00000471667 TOE1Q96GM8 510 aaKnown RBP3.91□□□□□ -1.78
LRCH3-213ENST00000471667 UROC1Q96N76 676 aa3.91□□□□□ -1.78
LRCH3-213ENST00000471667 CLIC6Q96NY7 704 aa3.91□□□□□ -1.78
LRCH3-213ENST00000471667 LRRC3BQ96PB8 259 aa3.91□□□□□ -1.78
LRCH3-213ENST00000471667 ELF4Q99607 663 aaPredicted RBP3.91□□□□□ -1.78
LRCH3-213ENST00000471667 NUP58Q9BVL2 599 aa3.91□□□□□ -1.78
LRCH3-213ENST00000471667 KLC2Q9H0B6 622 aa3.91□□□□□ -1.78
LRCH3-213ENST00000471667 CD248Q9HCU0 757 aa3.91□□□□□ -1.78
LRCH3-213ENST00000471667 IL1RAPL2Q9NP60 686 aa3.91□□□□□ -1.78
LRCH3-213ENST00000471667 ARHGEF4Q9NR80 690 aa3.91□□□□□ -1.78
LRCH3-213ENST00000471667 GABBR1Q9UBS5 961 aa3.91□□□□□ -1.78
LRCH3-213ENST00000471667 SEC63Q9UGP8 760 aaKnown RBP3.91□□□□□ -1.78
LRCH3-213ENST00000471667 TMEFF2Q9UIK5 374 aaPredicted RBP3.91□□□□□ -1.78
LRCH3-213ENST00000471667 NOB1Q9ULX3 412 aaKnown RBP3.91□□□□□ -1.78
LRCH3-213ENST00000471667 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.91□□□□□ -1.78
LRCH3-213ENST00000471667 COA3Q9Y2R0 106 aaPredicted RBP3.91□□□□□ -1.78
LRCH3-213ENST00000471667 YIPF1Q9Y548 306 aa3.91□□□□□ -1.78
LRCH3-213ENST00000471667 PCDHA8Q9Y5H6 950 aa3.91□□□□□ -1.78
LRCH3-213ENST00000471667 PCDHA10Q9Y5I2 948 aa3.91□□□□□ -1.78
LRCH3-213ENST00000471667 HIVEP1P15822 2718 aa3.91□□□□□ -1.78
LRCH3-213ENST00000471667 TNRC6BQ9UPQ9 1833 aaKnown RBP3.91□□□□□ -1.78
LRCH3-213ENST00000471667 NBASA2RRP1 2371 aa3.9□□□□□ -1.78
LRCH3-213ENST00000471667 ADGRG4Q8IZF6 3080 aa3.9□□□□□ -1.78
LRCH3-213ENST00000471667 TCRBV5S2A0A599 114 aa3.9□□□□□ -1.79
LRCH3-213ENST00000471667 TBC1D3BA6NDS4 549 aa3.9□□□□□ -1.79
LRCH3-213ENST00000471667 KLRF2D3W0D1 207 aa3.9□□□□□ -1.79
LRCH3-213ENST00000471667 TMEM189-UBE2V1I3L0A0 370 aa3.9□□□□□ -1.79
LRCH3-213ENST00000471667 HGSO14964 777 aaPredicted RBP3.9□□□□□ -1.79
LRCH3-213ENST00000471667 IPO8O15397 1037 aaKnown RBP3.9□□□□□ -1.79
LRCH3-213ENST00000471667 GPR42O15529 346 aa3.9□□□□□ -1.79
LRCH3-213ENST00000471667 GRID2O43424 1007 aa3.9□□□□□ -1.79
LRCH3-213ENST00000471667 CYP7B1O75881 506 aa3.9□□□□□ -1.79
LRCH3-213ENST00000471667 CNTN5O94779 1100 aa3.9□□□□□ -1.79
LRCH3-213ENST00000471667 TNFSF15O95150 251 aa3.9□□□□□ -1.79
LRCH3-213ENST00000471667 SEC24AO95486 1093 aa3.9□□□□□ -1.79
LRCH3-213ENST00000471667 LDLRP01130 860 aa3.9□□□□□ -1.79
LRCH3-213ENST00000471667 SLPIP03973 132 aa3.9□□□□□ -1.79
LRCH3-213ENST00000471667 ALPPL2P10696 532 aa3.9□□□□□ -1.79
LRCH3-213ENST00000471667 PRF1P14222 555 aa3.9□□□□□ -1.79
LRCH3-213ENST00000471667 HNRNPLP14866 589 aaKnown RBP eCLIP3.9□□□□□ -1.79
LRCH3-213ENST00000471667 ATP2B1P20020 1258 aa3.9□□□□□ -1.79
LRCH3-213ENST00000471667 TKTP29401 623 aaKnown RBP3.9□□□□□ -1.79
LRCH3-213ENST00000471667 NTSR1P30989 418 aa3.9□□□□□ -1.79
LRCH3-213ENST00000471667 CSTF2P33240 577 aaKnown RBP eCLIP3.9□□□□□ -1.797e-8■■■■□ 26.1
LRCH3-213ENST00000471667 ECI1P42126 302 aa3.9□□□□□ -1.79
LRCH3-213ENST00000471667 PDE6CP51160 858 aa3.9□□□□□ -1.79
LRCH3-213ENST00000471667 HMGA2P52926 109 aa3.9□□□□□ -1.79
LRCH3-213ENST00000471667 COPB1P53618 953 aaKnown RBP3.9□□□□□ -1.79
LRCH3-213ENST00000471667 ZNF268Q14587 947 aaPredicted RBP3.9□□□□□ -1.79
LRCH3-213ENST00000471667 E2F5Q15329 346 aa3.9□□□□□ -1.79
LRCH3-213ENST00000471667 BTBD8Q5XKL5 378 aa3.9□□□□□ -1.79
LRCH3-213ENST00000471667 SP5Q6BEB4 398 aaPredicted RBP3.9□□□□□ -1.79
LRCH3-213ENST00000471667 DNAJB7Q7Z6W7 309 aaPredicted RBP3.9□□□□□ -1.79
LRCH3-213ENST00000471667 CLEC14AQ86T13 490 aa3.9□□□□□ -1.79
LRCH3-213ENST00000471667 CIR1Q86X95 450 aaPredicted RBP3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms