RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 LTBP2Q14767 1821 aa6.13□□□□□ -1.43
C9orf3-205ENST00000427193 PTPRZ1P23471 2315 aaPredicted RBP6.13□□□□□ -1.43
C9orf3-205ENST00000427193 PKD1L2Q7Z442 2459 aa6.13□□□□□ -1.43
C9orf3-205ENST00000427193 LRRC14BA6NHZ5 514 aa6.13□□□□□ -1.43
C9orf3-205ENST00000427193 TMEM232C9JQI7 657 aa6.13□□□□□ -1.43
C9orf3-205ENST00000427193 VWA5AO00534 786 aa6.13□□□□□ -1.43
C9orf3-205ENST00000427193 ZBTB5O15062 677 aa6.13□□□□□ -1.43
C9orf3-205ENST00000427193 CNMDO75829 334 aa6.13□□□□□ -1.43
C9orf3-205ENST00000427193 SCG2P13521 617 aa6.13□□□□□ -1.43
C9orf3-205ENST00000427193 CDK11BP21127 795 aaKnown RBP6.13□□□□□ -1.43
C9orf3-205ENST00000427193 U2AF2P26368 475 aaKnown RBP eCLIP6.13□□□□□ -1.43
C9orf3-205ENST00000427193 EPHB2P29323 1055 aa6.13□□□□□ -1.43
C9orf3-205ENST00000427193 PTGER1P34995 402 aa6.13□□□□□ -1.43
C9orf3-205ENST00000427193 SLC16A2P36021 539 aa6.13□□□□□ -1.43
C9orf3-205ENST00000427193 ALDH9A1P49189 494 aa6.13□□□□□ -1.43
C9orf3-205ENST00000427193 STAT2P52630 851 aa6.13□□□□□ -1.43
C9orf3-205ENST00000427193 TUBA4AP68366 448 aa6.13□□□□□ -1.43
C9orf3-205ENST00000427193 AAK1Q2M2I8 961 aa6.13□□□□□ -1.43
C9orf3-205ENST00000427193 AARS2Q5JTZ9 985 aaKnown RBP6.13□□□□□ -1.43
C9orf3-205ENST00000427193 SFRP4Q6FHJ7 346 aaPredicted RBP6.13□□□□□ -1.43
C9orf3-205ENST00000427193 SLC29A4Q7RTT9 530 aa6.13□□□□□ -1.43
C9orf3-205ENST00000427193 WDR53Q7Z5U6 358 aaPredicted RBP6.13□□□□□ -1.43
C9orf3-205ENST00000427193 NEK8Q86SG6 692 aa6.13□□□□□ -1.43
C9orf3-205ENST00000427193 USP37Q86T82 979 aa6.13□□□□□ -1.43
C9orf3-205ENST00000427193 DTX2Q86UW9 622 aa6.13□□□□□ -1.43
C9orf3-205ENST00000427193 FAM160B2Q86V87 743 aa6.13□□□□□ -1.43
C9orf3-205ENST00000427193 PRPF38AQ8NAV1 312 aaKnown RBP6.13□□□□□ -1.43
C9orf3-205ENST00000427193 CHURC1Q8WUH1 139 aa6.13□□□□□ -1.43
C9orf3-205ENST00000427193 CRYGNQ8WXF5 182 aa6.13□□□□□ -1.43
C9orf3-205ENST00000427193 PPM1EQ8WY54 764 aa6.13□□□□□ -1.43
C9orf3-205ENST00000427193 REPS1Q96D71 796 aa6.13□□□□□ -1.43
C9orf3-205ENST00000427193 PIGSQ96S52 555 aa6.13□□□□□ -1.43
C9orf3-205ENST00000427193 SLF1Q9BQI6 1058 aa6.13□□□□□ -1.43
C9orf3-205ENST00000427193 UBA5Q9GZZ9 404 aa6.13□□□□□ -1.43
C9orf3-205ENST00000427193 MAF1Q9H063 256 aa6.13□□□□□ -1.43
C9orf3-205ENST00000427193 ZMYND12Q9H0C1 365 aa6.13□□□□□ -1.43
C9orf3-205ENST00000427193 NRIP3Q9NQ35 241 aa6.13□□□□□ -1.43
C9orf3-205ENST00000427193 GJB4Q9NTQ9 266 aa6.13□□□□□ -1.43
C9orf3-205ENST00000427193 ORC3Q9UBD5 711 aaPredicted RBP6.13□□□□□ -1.43
C9orf3-205ENST00000427193 GJD2Q9UKL4 321 aa6.13□□□□□ -1.43
C9orf3-205ENST00000427193 AGTPBP1Q9UPW5 1226 aa6.13□□□□□ -1.43
C9orf3-205ENST00000427193 SMC3Q9UQE7 1217 aa6.13□□□□□ -1.43
C9orf3-205ENST00000427193 FRMPD2Q68DX3 1309 aaPredicted RBP6.13□□□□□ -1.43
C9orf3-205ENST00000427193 A0A0G2JMZ2 1700 aa6.13□□□□□ -1.43
C9orf3-205ENST00000427193 TCF20Q9UGU0 1960 aaKnown RBP6.13□□□□□ -1.43
C9orf3-205ENST00000427193 CPLX1O14810 134 aa6.12□□□□□ -1.43
C9orf3-205ENST00000427193 STX6O43752 255 aa6.12□□□□□ -1.43
C9orf3-205ENST00000427193 MMP1P03956 469 aa6.12□□□□□ -1.43
C9orf3-205ENST00000427193 ICAM1P05362 532 aa6.12□□□□□ -1.43
C9orf3-205ENST00000427193 PDCP20941 246 aa6.12□□□□□ -1.43
C9orf3-205ENST00000427193 OAZ1P54368 228 aa6.12□□□□□ -1.43
C9orf3-205ENST00000427193 COG2Q14746 738 aa6.12□□□□□ -1.43
C9orf3-205ENST00000427193 ODF1Q14990 250 aa6.12□□□□□ -1.43
C9orf3-205ENST00000427193 PTPN21Q16825 1174 aa6.12□□□□□ -1.43
C9orf3-205ENST00000427193 QRICH1Q2TAL8 776 aa6.12□□□□□ -1.43
C9orf3-205ENST00000427193 PARP14Q460N5 1801 aa6.12□□□□□ -1.43
C9orf3-205ENST00000427193 RNF187Q5TA31 235 aaPredicted RBP6.12□□□□□ -1.43
C9orf3-205ENST00000427193 MORN5Q5VZ52 161 aa6.12□□□□□ -1.43
C9orf3-205ENST00000427193 CPLX2Q6PUV4 134 aaKnown RBP6.12□□□□□ -1.43
C9orf3-205ENST00000427193 FASTKD5Q7L8L6 764 aaKnown RBP6.12□□□□□ -1.43
C9orf3-205ENST00000427193 TRIB2Q92519 343 aa6.12□□□□□ -1.43
C9orf3-205ENST00000427193 RPL36ALQ969Q0 106 aaKnown RBP6.12□□□□□ -1.43
C9orf3-205ENST00000427193 SLC26A6Q9BXS9 759 aa6.12□□□□□ -1.43
C9orf3-205ENST00000427193 RPAP3Q9H6T3 665 aaPredicted RBP6.12□□□□□ -1.43
C9orf3-205ENST00000427193 SERHLQ9NQF3 203 aa6.12□□□□□ -1.43
C9orf3-205ENST00000427193 HOXC10Q9NYD6 342 aa6.12□□□□□ -1.43
C9orf3-205ENST00000427193 SH3BP4Q9P0V3 963 aa6.12□□□□□ -1.43
C9orf3-205ENST00000427193 FEZ2Q9UHY8 353 aaPredicted RBP6.12□□□□□ -1.43
C9orf3-205ENST00000427193 BTBD3Q9Y2F9 522 aa6.12□□□□□ -1.43
C9orf3-205ENST00000427193 PCDHA3Q9Y5H8 950 aa6.12□□□□□ -1.43
C9orf3-205ENST00000427193 MYH4Q9Y623 1939 aa6.12□□□□□ -1.43
C9orf3-205ENST00000427193 MORC2Q9Y6X9 1032 aaPredicted RBP6.12□□□□□ -1.43
C9orf3-205ENST00000427193 EPG5Q9HCE0 2579 aa6.12□□□□□ -1.43
C9orf3-205ENST00000427193 CHD8Q9HCK8 2581 aa6.12□□□□□ -1.43
C9orf3-205ENST00000427193 hCG_1642624A0A1W2PR95 340 aa6.11□□□□□ -1.43
C9orf3-205ENST00000427193 KIF28PB7ZC32 967 aa6.11□□□□□ -1.43
C9orf3-205ENST00000427193 ALG1L2C9J202 215 aa6.11□□□□□ -1.43
C9orf3-205ENST00000427193 MEIS2O14770 477 aa6.11□□□□□ -1.43
C9orf3-205ENST00000427193 PPM1DO15297 605 aa6.11□□□□□ -1.43
C9orf3-205ENST00000427193 TP73O15350 636 aa6.11□□□□□ -1.43
C9orf3-205ENST00000427193 TLR5O60602 858 aa6.11□□□□□ -1.43
C9orf3-205ENST00000427193 KATNA1O75449 491 aa6.11□□□□□ -1.43
C9orf3-205ENST00000427193 HK3P52790 923 aa6.11□□□□□ -1.43
C9orf3-205ENST00000427193 NUCB2P80303 420 aa6.11□□□□□ -1.43
C9orf3-205ENST00000427193 CDC37Q16543 378 aaPredicted RBP6.11□□□□□ -1.43
C9orf3-205ENST00000427193 FAM110CQ1W6H9 321 aa6.11□□□□□ -1.43
C9orf3-205ENST00000427193 EARS2Q5JPH6 523 aaKnown RBP6.11□□□□□ -1.43
C9orf3-205ENST00000427193 FAM160B1Q5W0V3 765 aa6.11□□□□□ -1.43
C9orf3-205ENST00000427193 GALNT17Q6IS24 598 aa6.11□□□□□ -1.43
C9orf3-205ENST00000427193 ZNF66Q6ZN08 573 aa6.11□□□□□ -1.43
C9orf3-205ENST00000427193 WASF1Q92558 559 aa6.11□□□□□ -1.43
C9orf3-205ENST00000427193 BADQ92934 168 aa6.11□□□□□ -1.43
C9orf3-205ENST00000427193 TNPO1Q92973 898 aaKnown RBP6.11□□□□□ -1.43
C9orf3-205ENST00000427193 RGMAQ96B86 450 aa6.11□□□□□ -1.43
C9orf3-205ENST00000427193 RRP36Q96EU6 259 aaKnown RBP6.11□□□□□ -1.43
C9orf3-205ENST00000427193 MRPL46Q9H2W6 279 aaKnown RBP6.11□□□□□ -1.43
C9orf3-205ENST00000427193 FOXP1Q9H334 677 aaPredicted RBP6.11□□□□□ -1.43
C9orf3-205ENST00000427193 TXNRD2Q9NNW7 524 aa6.11□□□□□ -1.43
C9orf3-205ENST00000427193 CHMP5Q9NZZ3 219 aa6.11□□□□□ -1.43
C9orf3-205ENST00000427193 MORF4L1Q9UBU8 362 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms