RNA–Protein interactions for RNA: ENST00000400771.7

ATG4B-202, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 663 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-202ENST00000400771 TBC1D30Q9Y2I9 924 aa15.91■□□□□ 0.14
ATG4B-202ENST00000400771 ANKRD36A6QL64 1941 aa15.9■□□□□ 0.14
ATG4B-202ENST00000400771 DRGXA6NNA5 263 aa15.9■□□□□ 0.14
ATG4B-202ENST00000400771 TTC34A8MYJ7 566 aa15.9■□□□□ 0.14
ATG4B-202ENST00000400771 SIN3BO75182 1162 aa15.9■□□□□ 0.14
ATG4B-202ENST00000400771 CALB1P05937 261 aa15.9■□□□□ 0.14
ATG4B-202ENST00000400771 SRPRAP08240 638 aaKnown RBP15.9■□□□□ 0.14
ATG4B-202ENST00000400771 CD6P30203 668 aa15.9■□□□□ 0.14
ATG4B-202ENST00000400771 RFC1P35251 1148 aaPredicted RBP15.9■□□□□ 0.14
ATG4B-202ENST00000400771 PRKCIP41743 596 aa15.9■□□□□ 0.14
ATG4B-202ENST00000400771 CDH4P55283 916 aa15.9■□□□□ 0.14
ATG4B-202ENST00000400771 HDAC4P56524 1084 aa15.9■□□□□ 0.14
ATG4B-202ENST00000400771 RPS14P62263 151 aaKnown RBP15.9■□□□□ 0.14
ATG4B-202ENST00000400771 FANCCQ00597 558 aa15.9■□□□□ 0.14
ATG4B-202ENST00000400771 ZNF33AQ06730 810 aa15.9■□□□□ 0.14
ATG4B-202ENST00000400771 C1QBPQ07021 282 aaKnown RBP15.9■□□□□ 0.14
ATG4B-202ENST00000400771 SLC12A1Q13621 1099 aa15.9■□□□□ 0.14
ATG4B-202ENST00000400771 CDO1Q16878 200 aa15.9■□□□□ 0.14
ATG4B-202ENST00000400771 AASDHQ4L235 1098 aaPredicted RBP15.9■□□□□ 0.14
ATG4B-202ENST00000400771 SYT12Q8IV01 421 aa15.9■□□□□ 0.14
ATG4B-202ENST00000400771 PIGKQ92643 395 aa15.9■□□□□ 0.14
ATG4B-202ENST00000400771 PRCCQ92733 491 aaPredicted RBP15.9■□□□□ 0.14
ATG4B-202ENST00000400771 TOE1Q96GM8 510 aaKnown RBP15.9■□□□□ 0.14
ATG4B-202ENST00000400771 RPL10LQ96L21 214 aaKnown RBP15.9■□□□□ 0.14
ATG4B-202ENST00000400771 PSMB7Q99436 277 aa15.9■□□□□ 0.14
ATG4B-202ENST00000400771 EDEM2Q9BV94 578 aa15.9■□□□□ 0.14
ATG4B-202ENST00000400771 RSPH9Q9H1X1 276 aaPredicted RBP15.9■□□□□ 0.14
ATG4B-202ENST00000400771 EVLQ9UI08 416 aaPredicted RBP15.9■□□□□ 0.14
ATG4B-202ENST00000400771 SLCO3A1Q9UIG8 710 aa15.9■□□□□ 0.14
ATG4B-202ENST00000400771 C10orf142B7Z368 130 aa15.89■□□□□ 0.13
ATG4B-202ENST00000400771 E9PAM4 449 aa15.89■□□□□ 0.13
ATG4B-202ENST00000400771 TM4SF5O14894 197 aa15.89■□□□□ 0.13
ATG4B-202ENST00000400771 MAP3K13O43283 966 aa15.89■□□□□ 0.13
ATG4B-202ENST00000400771 CLDN11O75508 207 aa15.89■□□□□ 0.13
ATG4B-202ENST00000400771 VAV1P15498 845 aa15.89■□□□□ 0.13
ATG4B-202ENST00000400771 PTMSP20962 102 aa15.89■□□□□ 0.13
ATG4B-202ENST00000400771 SDC4P31431 198 aa15.89■□□□□ 0.13
ATG4B-202ENST00000400771 HOXD12P35452 270 aa15.89■□□□□ 0.13
ATG4B-202ENST00000400771 ECT2LQ008S8 904 aa15.89■□□□□ 0.13
ATG4B-202ENST00000400771 FILIP1LQ4L180 1135 aa15.89■□□□□ 0.13
ATG4B-202ENST00000400771 FIGNQ5HY92 759 aa15.89■□□□□ 0.13
ATG4B-202ENST00000400771 C9orf64Q5T6V5 341 aa15.89■□□□□ 0.13
ATG4B-202ENST00000400771 WDR59Q6PJI9 974 aa15.89■□□□□ 0.13
ATG4B-202ENST00000400771 SND1Q7KZF4 910 aaKnown RBP eCLIP15.89■□□□□ 0.13
ATG4B-202ENST00000400771 STRADAQ7RTN6 431 aa15.89■□□□□ 0.13
ATG4B-202ENST00000400771 ZNF571Q7Z3V5 609 aaPredicted RBP15.89■□□□□ 0.13
ATG4B-202ENST00000400771 DNAAF5Q86Y56 855 aa15.89■□□□□ 0.13
ATG4B-202ENST00000400771 MCOLN2Q8IZK6 566 aa15.89■□□□□ 0.13
ATG4B-202ENST00000400771 CCDC185Q8N715 623 aa15.89■□□□□ 0.13
ATG4B-202ENST00000400771 C12orf50Q8NA57 414 aaPredicted RBP15.89■□□□□ 0.13
ATG4B-202ENST00000400771 FRS2Q8WU20 508 aa15.89■□□□□ 0.13
ATG4B-202ENST00000400771 PTPRN2Q92932 1015 aa15.89■□□□□ 0.13
ATG4B-202ENST00000400771 ZNF419Q96HQ0 510 aaPredicted RBP15.89■□□□□ 0.13
ATG4B-202ENST00000400771 C1orf74Q96LT6 269 aa15.89■□□□□ 0.13
ATG4B-202ENST00000400771 HAPLN3Q96S86 360 aa15.89■□□□□ 0.13
ATG4B-202ENST00000400771 FEM1AQ9BSK4 669 aa15.89■□□□□ 0.13
ATG4B-202ENST00000400771 RTKNQ9BST9 563 aa15.89■□□□□ 0.13
ATG4B-202ENST00000400771 MAGEB5Q9BZ81 275 aa15.89■□□□□ 0.13
ATG4B-202ENST00000400771 SEPT11Q9NVA2 429 aaKnown RBP15.89■□□□□ 0.13
ATG4B-202ENST00000400771 AIPL1Q9NZN9 384 aa15.89■□□□□ 0.13
ATG4B-202ENST00000400771 MPP6Q9NZW5 540 aa15.89■□□□□ 0.13
ATG4B-202ENST00000400771 SERGEFQ9UGK8 458 aa15.89■□□□□ 0.13
ATG4B-202ENST00000400771 CCP110O43303 1012 aa15.88■□□□□ 0.13
ATG4B-202ENST00000400771 ATMINO43313 823 aaPredicted RBP15.88■□□□□ 0.13
ATG4B-202ENST00000400771 MOCS3O95396 460 aa15.88■□□□□ 0.13
ATG4B-202ENST00000400771 KRT3P12035 628 aa15.88■□□□□ 0.13
ATG4B-202ENST00000400771 RRM1P23921 792 aa15.88■□□□□ 0.13
ATG4B-202ENST00000400771 VASPP50552 380 aaPredicted RBP15.88■□□□□ 0.13
ATG4B-202ENST00000400771 RPL7AP62424 266 aaKnown RBP15.88■□□□□ 0.13
ATG4B-202ENST00000400771 OGDHQ02218 1023 aa15.88■□□□□ 0.13
ATG4B-202ENST00000400771 NRG1Q02297 640 aaPredicted RBP15.88■□□□□ 0.13
ATG4B-202ENST00000400771 STPG1Q5TH74 334 aa15.88■□□□□ 0.13
ATG4B-202ENST00000400771 HGSNATQ68CP4 663 aa15.88■□□□□ 0.13
ATG4B-202ENST00000400771 ZNF776Q68DI1 518 aaPredicted RBP15.88■□□□□ 0.13
ATG4B-202ENST00000400771 ERMP1Q7Z2K6 904 aa15.88■□□□□ 0.13
ATG4B-202ENST00000400771 CCDC117Q8IWD4 279 aaPredicted RBP15.88■□□□□ 0.13
ATG4B-202ENST00000400771 FAM172AQ8WUF8 416 aa15.88■□□□□ 0.13
ATG4B-202ENST00000400771 MCEEQ96PE7 176 aa15.88■□□□□ 0.13
ATG4B-202ENST00000400771 HAUS4Q9H6D7 363 aa15.88■□□□□ 0.13
ATG4B-202ENST00000400771 CAPN10Q9HC96 672 aa15.88■□□□□ 0.13
ATG4B-202ENST00000400771 PAXBP1Q9Y5B6 917 aa15.88■□□□□ 0.13
ATG4B-202ENST00000400771 SLCO1B1Q9Y6L6 691 aa15.88■□□□□ 0.13
ATG4B-202ENST00000400771 CEP295Q9C0D2 2601 aa15.88■□□□□ 0.13
ATG4B-202ENST00000400771 CHD8Q9HCK8 2581 aa15.87■□□□□ 0.13
ATG4B-202ENST00000400771 EDDM13A0A1B0GTR0 161 aa15.87■□□□□ 0.13
ATG4B-202ENST00000400771 MED19A0JLT2 244 aaPredicted RBP15.87■□□□□ 0.13
ATG4B-202ENST00000400771 PCNX2A6NKB5 2137 aa15.87■□□□□ 0.13
ATG4B-202ENST00000400771 SIGLEC16A6NMB1 481 aa15.87■□□□□ 0.13
ATG4B-202ENST00000400771 FAM72CH0Y354 149 aa15.87■□□□□ 0.13
ATG4B-202ENST00000400771 DDX3XO00571 662 aaKnown RBP eCLIP15.87■□□□□ 0.132e-7■■□□□ 13.3
ATG4B-202ENST00000400771 CDX4O14627 284 aaPredicted RBP15.87■□□□□ 0.13
ATG4B-202ENST00000400771 ZBTB24O43167 697 aaPredicted RBP15.87■□□□□ 0.13
ATG4B-202ENST00000400771 SERPINC1P01008 464 aa15.87■□□□□ 0.13
ATG4B-202ENST00000400771 GPD1P21695 349 aa15.87■□□□□ 0.13
ATG4B-202ENST00000400771 ACSL1P33121 698 aa15.87■□□□□ 0.13
ATG4B-202ENST00000400771 ST8SIA6P61647 398 aa15.87■□□□□ 0.13
ATG4B-202ENST00000400771 IRX4P78413 519 aa15.87■□□□□ 0.13
ATG4B-202ENST00000400771 ZNF252P-AS1Q0IIN9 211 aa15.87■□□□□ 0.13
ATG4B-202ENST00000400771 SCAPQ12770 1279 aa15.87■□□□□ 0.13
ATG4B-202ENST00000400771 ASIC2Q16515 512 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms