RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 PCOLCE2Q9UKZ9 415 aa9.09□□□□□ -0.95
MSH5-205ENST00000395853 DIMT1Q9UNQ2 313 aaKnown RBP9.09□□□□□ -0.95
MSH5-205ENST00000395853 MAPRE3Q9UPY8 281 aa9.09□□□□□ -0.95
MSH5-205ENST00000395853 VWA7Q9Y334 891 aa9.09□□□□□ -0.95
MSH5-205ENST00000395853 CAB39Q9Y376 341 aaPredicted RBP9.09□□□□□ -0.95
MSH5-205ENST00000395853 LACTBL1A8MY62 500 aa9.09□□□□□ -0.95
MSH5-205ENST00000395853 H0Y858 1186 aa9.09□□□□□ -0.95
MSH5-205ENST00000395853 VWA5AO00534 786 aa9.09□□□□□ -0.95
MSH5-205ENST00000395853 GIPC1O14908 333 aa9.09□□□□□ -0.95
MSH5-205ENST00000395853 KPNA5O15131 536 aa9.09□□□□□ -0.95
MSH5-205ENST00000395853 DYRK3O43781 588 aa9.09□□□□□ -0.95
MSH5-205ENST00000395853 ATE1O95260 518 aa9.09□□□□□ -0.95
MSH5-205ENST00000395853 TTLL1O95922 423 aa9.09□□□□□ -0.95
MSH5-205ENST00000395853 POLR2MP0CAP2 368 aa9.09□□□□□ -0.95
MSH5-205ENST00000395853 FGFR4P22455 802 aa9.09□□□□□ -0.95
MSH5-205ENST00000395853 PSMA4P25789 261 aaKnown RBP9.09□□□□□ -0.95
MSH5-205ENST00000395853 MAGEA4P43358 317 aa9.09□□□□□ -0.95
MSH5-205ENST00000395853 KCTD19Q17RG1 926 aaPredicted RBP9.09□□□□□ -0.95
MSH5-205ENST00000395853 PERM1Q5SV97 790 aa9.09□□□□□ -0.95
MSH5-205ENST00000395853 RRAGBQ5VZM2 374 aa9.09□□□□□ -0.95
MSH5-205ENST00000395853 CPNE9Q8IYJ1 553 aa9.09□□□□□ -0.95
MSH5-205ENST00000395853 PPM1KQ8N3J5 372 aa9.09□□□□□ -0.95
MSH5-205ENST00000395853 LEMD2Q8NC56 503 aa9.09□□□□□ -0.95
MSH5-205ENST00000395853 FBXO25Q8TCJ0 367 aa9.09□□□□□ -0.95
MSH5-205ENST00000395853 LRRC15Q8TF66 581 aa9.09□□□□□ -0.95
MSH5-205ENST00000395853 SPOCK2Q92563 424 aa9.09□□□□□ -0.95
MSH5-205ENST00000395853 ZDHHC15Q96MV8 337 aa9.09□□□□□ -0.95
MSH5-205ENST00000395853 TRIM51Q9BSJ1 452 aa9.09□□□□□ -0.95
MSH5-205ENST00000395853 MKNK1Q9BUB5 465 aa9.09□□□□□ -0.95
MSH5-205ENST00000395853 C1orf50Q9BV19 199 aa9.09□□□□□ -0.95
MSH5-205ENST00000395853 TDRD3Q9H7E2 651 aaKnown RBP9.09□□□□□ -0.95
MSH5-205ENST00000395853 C6orf50Q9HD87 102 aa9.09□□□□□ -0.95
MSH5-205ENST00000395853 SMG5Q9UPR3 1016 aaKnown RBP9.09□□□□□ -0.95
MSH5-205ENST00000395853 INPP5FQ9Y2H2 1132 aa9.09□□□□□ -0.95
MSH5-205ENST00000395853 HCN4Q9Y3Q4 1203 aa9.09□□□□□ -0.95
MSH5-205ENST00000395853 UGT2A1Q9Y4X1 527 aa9.09□□□□□ -0.95
MSH5-205ENST00000395853 DDTLA6NHG4 134 aaPredicted RBP9.08□□□□□ -0.96
MSH5-205ENST00000395853 C16orf96A6NNT2 1141 aa9.08□□□□□ -0.96
MSH5-205ENST00000395853 B2RBV5 119 aa9.08□□□□□ -0.96
MSH5-205ENST00000395853 H3BRJ5 948 aa9.08□□□□□ -0.96
MSH5-205ENST00000395853 TOR1AO14656 332 aa9.08□□□□□ -0.96
MSH5-205ENST00000395853 ATP2A1O14983 1001 aa9.08□□□□□ -0.96
MSH5-205ENST00000395853 RAD51BO15315 384 aa9.08□□□□□ -0.96
MSH5-205ENST00000395853 ECDO95905 644 aaPredicted RBP9.08□□□□□ -0.96
MSH5-205ENST00000395853 KRT8P05787 483 aa9.08□□□□□ -0.96
MSH5-205ENST00000395853 PGK2P07205 417 aa9.08□□□□□ -0.96
MSH5-205ENST00000395853 SNHG28P0DPA3 235 aa9.08□□□□□ -0.96
MSH5-205ENST00000395853 L1CAMP32004 1257 aa9.08□□□□□ -0.96
MSH5-205ENST00000395853 SLC1A4P43007 532 aa9.08□□□□□ -0.96
MSH5-205ENST00000395853 ZNF200P98182 395 aaPredicted RBP9.08□□□□□ -0.96
MSH5-205ENST00000395853 ZBTB16Q05516 673 aa9.08□□□□□ -0.96
MSH5-205ENST00000395853 PPATQ06203 517 aa9.08□□□□□ -0.96
MSH5-205ENST00000395853 GK3PQ14409 553 aa9.08□□□□□ -0.96
MSH5-205ENST00000395853 TAF5Q15542 800 aa9.08□□□□□ -0.96
MSH5-205ENST00000395853 TRIP13Q15645 432 aaPredicted RBP9.08□□□□□ -0.96
MSH5-205ENST00000395853 NAB2Q15742 525 aa9.08□□□□□ -0.96
MSH5-205ENST00000395853 TBRG1Q3YBR2 411 aa9.08□□□□□ -0.96
MSH5-205ENST00000395853 DUPD1Q68J44 220 aa9.08□□□□□ -0.96
MSH5-205ENST00000395853 ANKRD26P1Q6NSI1 321 aa9.08□□□□□ -0.96
MSH5-205ENST00000395853 UGT3A1Q6NUS8 523 aa9.08□□□□□ -0.96
MSH5-205ENST00000395853 KYAT3Q6YP21 454 aaKnown RBP9.08□□□□□ -0.96
MSH5-205ENST00000395853 MRPL10Q7Z7H8 261 aaKnown RBP9.08□□□□□ -0.96
MSH5-205ENST00000395853 TRIM59Q8IWR1 403 aa9.08□□□□□ -0.96
MSH5-205ENST00000395853 PM20D2Q8IYS1 436 aa9.08□□□□□ -0.96
MSH5-205ENST00000395853 CADM2Q8N3J6 435 aa9.08□□□□□ -0.96
MSH5-205ENST00000395853 CPA6Q8N4T0 437 aa9.08□□□□□ -0.96
MSH5-205ENST00000395853 SLC2A14Q8TDB8 520 aa9.08□□□□□ -0.96
MSH5-205ENST00000395853 SLC26A7Q8TE54 656 aa9.08□□□□□ -0.96
MSH5-205ENST00000395853 PIK3R3Q92569 461 aa9.08□□□□□ -0.96
MSH5-205ENST00000395853 THTPAQ9BU02 230 aa9.08□□□□□ -0.96
MSH5-205ENST00000395853 NPHS2Q9NP85 383 aa9.08□□□□□ -0.96
MSH5-205ENST00000395853 SUCOQ9UBS9 1254 aaKnown RBP9.08□□□□□ -0.96
MSH5-205ENST00000395853 FAM198AQ9UFP1 575 aa9.08□□□□□ -0.96
MSH5-205ENST00000395853 AP4S1Q9Y587 144 aa9.08□□□□□ -0.96
MSH5-205ENST00000395853 SNCAIPQ9Y6H5 919 aa9.08□□□□□ -0.96
MSH5-205ENST00000395853 GREB1LQ9C091 1923 aaPredicted RBP9.08□□□□□ -0.96
MSH5-205ENST00000395853 A0A1W2PPW3 197 aa9.08□□□□□ -0.96
MSH5-205ENST00000395853 SSX5O60225 188 aa9.08□□□□□ -0.96
MSH5-205ENST00000395853 CALB1P05937 261 aa9.08□□□□□ -0.96
MSH5-205ENST00000395853 HLA-DOAP06340 250 aa9.08□□□□□ -0.96
MSH5-205ENST00000395853 SFTPCP11686 197 aa9.08□□□□□ -0.96
MSH5-205ENST00000395853 ITGA4P13612 1032 aa9.08□□□□□ -0.96
MSH5-205ENST00000395853 ITGA2P17301 1181 aa9.08□□□□□ -0.96
MSH5-205ENST00000395853 TGM1P22735 817 aa9.08□□□□□ -0.96
MSH5-205ENST00000395853 SOX11P35716 441 aa9.08□□□□□ -0.96
MSH5-205ENST00000395853 NPTX2P47972 431 aa9.08□□□□□ -0.96
MSH5-205ENST00000395853 HSPA13P48723 471 aa9.08□□□□□ -0.96
MSH5-205ENST00000395853 SLC12A2P55011 1212 aa9.08□□□□□ -0.96
MSH5-205ENST00000395853 DAB2P98082 770 aa9.08□□□□□ -0.96
MSH5-205ENST00000395853 TARDBPQ13148 414 aaKnown RBP eCLIP9.08□□□□□ -0.96
MSH5-205ENST00000395853 CDK10Q15131 360 aa9.08□□□□□ -0.96
MSH5-205ENST00000395853 NFIL3Q16649 462 aa9.08□□□□□ -0.96
MSH5-205ENST00000395853 ZBED5Q49AG3 693 aa9.08□□□□□ -0.96
MSH5-205ENST00000395853 DNAL1Q4LDG9 190 aa9.08□□□□□ -0.96
MSH5-205ENST00000395853 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.08□□□□□ -0.96
MSH5-205ENST00000395853 OGFRL1Q5TC84 451 aaPredicted RBP9.08□□□□□ -0.96
MSH5-205ENST00000395853 DCAF15Q66K64 600 aa9.08□□□□□ -0.96
MSH5-205ENST00000395853 GTF2IRD2BQ6EKJ0 949 aa9.08□□□□□ -0.96
MSH5-205ENST00000395853 ARHGAP36Q6ZRI8 547 aa9.08□□□□□ -0.96
MSH5-205ENST00000395853 KCTD1Q719H9 257 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms