RNA–Protein interactions for RNA: ENST00000357325.9

HDGF-201, Transcript of heparin binding growth factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGF, Length 2,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-201ENST00000357325 C6orf222P0C671 652 aaPredicted RBP25.53■■□□□ 1.68
HDGF-201ENST00000357325 PPIDQ08752 370 aaKnown RBP25.53■■□□□ 1.68
HDGF-201ENST00000357325 ITGA9Q13797 1035 aa25.53■■□□□ 1.68
HDGF-201ENST00000357325 RAB41Q5JT25 222 aa25.53■■□□□ 1.68
HDGF-201ENST00000357325 KCTD11Q693B1 232 aa25.53■■□□□ 1.68
HDGF-201ENST00000357325 FSTL4Q6MZW2 842 aa25.53■■□□□ 1.68
HDGF-201ENST00000357325 ARHGAP36Q6ZRI8 547 aa25.53■■□□□ 1.68
HDGF-201ENST00000357325 USP33Q8TEY7 942 aa25.53■■□□□ 1.68
HDGF-201ENST00000357325 HASPINQ8TF76 798 aa25.53■■□□□ 1.68
HDGF-201ENST00000357325 UPF1Q92900 1129 aaKnown RBP eCLIP25.53■■□□□ 1.685e-24■■■■■ 50
HDGF-201ENST00000357325 RTP3Q9BQQ7 232 aa25.53■■□□□ 1.68
HDGF-201ENST00000357325 TXNDC16Q9P2K2 825 aa25.53■■□□□ 1.68
HDGF-201ENST00000357325 COPG2Q9UBF2 871 aa25.53■■□□□ 1.68
HDGF-201ENST00000357325 DCDC2Q9UHG0 476 aa25.53■■□□□ 1.68
HDGF-201ENST00000357325 TAGLN3Q9UI15 199 aa25.53■■□□□ 1.68
HDGF-201ENST00000357325 RPL26L1Q9UNX3 145 aaKnown RBP25.53■■□□□ 1.68
HDGF-201ENST00000357325 SKAP2O75563 359 aaPredicted RBP25.52■■□□□ 1.68
HDGF-201ENST00000357325 CELF2O95319 508 aaKnown RBP25.52■■□□□ 1.68
HDGF-201ENST00000357325 PSMG1O95456 288 aa25.52■■□□□ 1.68
HDGF-201ENST00000357325 FSCN1Q16658 493 aaKnown RBP25.52■■□□□ 1.68
HDGF-201ENST00000357325 TIGD5Q53EQ6 642 aa25.52■■□□□ 1.68
HDGF-201ENST00000357325 MIEF2Q96C03 454 aa25.52■■□□□ 1.68
HDGF-201ENST00000357325 THTPAQ9BU02 230 aa25.52■■□□□ 1.68
HDGF-201ENST00000357325 OR12D3Q9UGF7 316 aa25.52■■□□□ 1.68
HDGF-201ENST00000357325 LRIG2O94898 1065 aa25.52■■□□□ 1.68
HDGF-201ENST00000357325 SERPINA6P08185 405 aa25.52■■□□□ 1.68
HDGF-201ENST00000357325 NAPRTQ6XQN6 538 aa25.52■■□□□ 1.68
HDGF-201ENST00000357325 OTOP3Q7RTS5 596 aa25.52■■□□□ 1.68
HDGF-201ENST00000357325 CCNJLQ8IV13 435 aa25.52■■□□□ 1.68
HDGF-201ENST00000357325 SPNS2Q8IVW8 549 aa25.52■■□□□ 1.68
HDGF-201ENST00000357325 NTAN1Q96AB6 310 aa25.52■■□□□ 1.68
HDGF-201ENST00000357325 RBBP8Q99708 897 aa25.52■■□□□ 1.68
HDGF-201ENST00000357325 AP5M1Q9H0R1 490 aa25.52■■□□□ 1.68
HDGF-201ENST00000357325 NMRK1Q9NWW6 199 aa25.52■■□□□ 1.68
HDGF-201ENST00000357325 SCAPQ12770 1279 aa25.51■■□□□ 1.67
HDGF-201ENST00000357325 ANKRD20A4Q4UJ75 823 aa25.51■■□□□ 1.67
HDGF-201ENST00000357325 SPANXN3Q5MJ09 141 aa25.51■■□□□ 1.67
HDGF-201ENST00000357325 RABGAP1LQ5R372 815 aa25.51■■□□□ 1.67
HDGF-201ENST00000357325 TMEM135Q86UB9 458 aa25.51■■□□□ 1.67
HDGF-201ENST00000357325 TMPRSS6Q8IU80 811 aa25.51■■□□□ 1.67
HDGF-201ENST00000357325 SERBP1Q8NC51 408 aaKnown RBP eCLIP25.51■■□□□ 1.672e-9■■■■■ 45
HDGF-201ENST00000357325 SH3TC2Q8TF17 1288 aa25.51■■□□□ 1.67
HDGF-201ENST00000357325 ZNF419Q96HQ0 510 aaPredicted RBP25.51■■□□□ 1.67
HDGF-201ENST00000357325 TMEM209Q96SK2 561 aa25.51■■□□□ 1.67
HDGF-201ENST00000357325 FERMT1Q9BQL6 677 aa25.51■■□□□ 1.67
HDGF-201ENST00000357325 CASS4Q9NQ75 786 aa25.51■■□□□ 1.67
HDGF-201ENST00000357325 TMLHEQ9NVH6 421 aa25.51■■□□□ 1.67
HDGF-201ENST00000357325 IQCA1LA6NCM1 817 aa25.51■■□□□ 1.67
HDGF-201ENST00000357325 ARL5CA6NH57 179 aa25.51■■□□□ 1.67
HDGF-201ENST00000357325 THP07101 528 aa25.51■■□□□ 1.67
HDGF-201ENST00000357325 STXBP5Q5T5C0 1151 aa25.51■■□□□ 1.67
HDGF-201ENST00000357325 AGMOQ6ZNB7 445 aa25.51■■□□□ 1.67
HDGF-201ENST00000357325 SLC25A41Q8N5S1 370 aa25.51■■□□□ 1.67
HDGF-201ENST00000357325 ZSCAN18Q8TBC5 510 aaPredicted RBP25.51■■□□□ 1.67
HDGF-201ENST00000357325 SLC9A7Q96T83 725 aa25.51■■□□□ 1.67
HDGF-201ENST00000357325 WDCPQ9H6R7 721 aa25.51■■□□□ 1.67
HDGF-201ENST00000357325 LRRC40Q9H9A6 602 aa25.51■■□□□ 1.67
HDGF-201ENST00000357325 CNGB3Q9NQW8 809 aa25.51■■□□□ 1.67
HDGF-201ENST00000357325 JCHAINP01591 159 aa25.5■■□□□ 1.67
HDGF-201ENST00000357325 HOXC8P31273 242 aa25.5■■□□□ 1.67
HDGF-201ENST00000357325 GARSP41250 739 aaKnown RBP25.5■■□□□ 1.67
HDGF-201ENST00000357325 USP4Q13107 963 aa25.5■■□□□ 1.67
HDGF-201ENST00000357325 PEX6Q13608 980 aa25.5■■□□□ 1.67
HDGF-201ENST00000357325 PPP2R5DQ14738 602 aa25.5■■□□□ 1.67
HDGF-201ENST00000357325 SNX30Q5VWJ9 437 aa25.5■■□□□ 1.67
HDGF-201ENST00000357325 TAC4Q86UU9 113 aa25.5■■□□□ 1.67
HDGF-201ENST00000357325 ATP2A3Q93084 1043 aa25.5■■□□□ 1.67
HDGF-201ENST00000357325 CPNE1Q99829 537 aa25.5■■□□□ 1.67
HDGF-201ENST00000357325 NAT9Q9BTE0 207 aa25.5■■□□□ 1.67
HDGF-201ENST00000357325 DNAI2Q9GZS0 605 aa25.5■■□□□ 1.67
HDGF-201ENST00000357325 SPECC1L-ADORA2AF8WAN1 911 aa25.49■■□□□ 1.67
HDGF-201ENST00000357325 ZNF195O14628 629 aa25.49■■□□□ 1.67
HDGF-201ENST00000357325 SORBS2O94875 1100 aaKnown RBP25.49■■□□□ 1.67
HDGF-201ENST00000357325 SERPINE1P05121 402 aa25.49■■□□□ 1.67
HDGF-201ENST00000357325 SRGAP2BP0DMP2 458 aa25.49■■□□□ 1.67
HDGF-201ENST00000357325 CD1EP15812 388 aa25.49■■□□□ 1.67
HDGF-201ENST00000357325 BDNFP23560 247 aa25.49■■□□□ 1.67
HDGF-201ENST00000357325 NMBRP28336 390 aa25.49■■□□□ 1.67
HDGF-201ENST00000357325 BRCC3P46736 316 aa25.49■■□□□ 1.67
HDGF-201ENST00000357325 PGFP49763 221 aa25.49■■□□□ 1.67
HDGF-201ENST00000357325 SLC25A3Q00325 362 aa25.49■■□□□ 1.67
HDGF-201ENST00000357325 CCDC6Q16204 474 aa25.49■■□□□ 1.67
HDGF-201ENST00000357325 WDR75Q8IWA0 830 aaKnown RBP25.49■■□□□ 1.67
HDGF-201ENST00000357325 AGR3Q8TD06 166 aa25.49■■□□□ 1.67
HDGF-201ENST00000357325 MYLPFQ96A32 169 aa25.49■■□□□ 1.67
HDGF-201ENST00000357325 PANX3Q96QZ0 392 aa25.49■■□□□ 1.67
HDGF-201ENST00000357325 C9IYK1 514 aa25.49■■□□□ 1.67
HDGF-201ENST00000357325 F8W810 466 aa25.49■■□□□ 1.67
HDGF-201ENST00000357325 FBXO21O94952 628 aa25.49■■□□□ 1.67
HDGF-201ENST00000357325 CHRNA1P02708 482 aa25.49■■□□□ 1.67
HDGF-201ENST00000357325 RALBP11234 206 aa25.49■■□□□ 1.67
HDGF-201ENST00000357325 IDH3AP50213 366 aa25.49■■□□□ 1.67
HDGF-201ENST00000357325 GJA9P57773 515 aa25.49■■□□□ 1.67
HDGF-201ENST00000357325 GRTP1Q5TC63 336 aa25.49■■□□□ 1.67
HDGF-201ENST00000357325 CNTD1Q8N815 330 aa25.49■■□□□ 1.67
HDGF-201ENST00000357325 SPATA22Q8NHS9 363 aa25.49■■□□□ 1.67
HDGF-201ENST00000357325 TSPAN18Q96SJ8 248 aa25.49■■□□□ 1.67
HDGF-201ENST00000357325 GBA3Q9H227 469 aa25.49■■□□□ 1.67
HDGF-201ENST00000357325 AGO3Q9H9G7 860 aaKnown RBP25.49■■□□□ 1.67
HDGF-201ENST00000357325 BFARQ9NZS9 450 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms