RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 INTS6LQ5JSJ4 861 aaKnown RBP14.02□□□□□ -0.16
SIX4-201ENST00000216513 MCOLN2Q8IZK6 566 aa14.02□□□□□ -0.16
SIX4-201ENST00000216513 ELMO1Q92556 727 aa14.02□□□□□ -0.16
SIX4-201ENST00000216513 KLK6Q92876 244 aa14.02□□□□□ -0.16
SIX4-201ENST00000216513 KCNB2Q92953 911 aa14.02□□□□□ -0.16
SIX4-201ENST00000216513 KXD1Q9BQD3 176 aa14.02□□□□□ -0.16
SIX4-201ENST00000216513 DUSP16Q9BY84 665 aa14.02□□□□□ -0.16
SIX4-201ENST00000216513 AARSP49588 968 aaKnown RBP eCLIP14.02□□□□□ -0.16
SIX4-201ENST00000216513 GCNT1Q02742 428 aa14.02□□□□□ -0.16
SIX4-201ENST00000216513 PEX6Q13608 980 aa14.02□□□□□ -0.16
SIX4-201ENST00000216513 OSBPL1AQ9BXW6 950 aa14.02□□□□□ -0.16
SIX4-201ENST00000216513 TMPRSS4Q9NRS4 437 aa14.02□□□□□ -0.16
SIX4-201ENST00000216513 MYO1GB0I1T2 1018 aa14.02□□□□□ -0.17
SIX4-201ENST00000216513 CCNT2O60583 730 aaKnown RBP14.02□□□□□ -0.17
SIX4-201ENST00000216513 PARGQ86W56 976 aa14.02□□□□□ -0.17
SIX4-201ENST00000216513 LRRC40Q9H9A6 602 aa14.02□□□□□ -0.17
SIX4-201ENST00000216513 CYP4F12Q9HCS2 524 aa14.02□□□□□ -0.17
SIX4-201ENST00000216513 A0A087X0T9 212 aa14.02□□□□□ -0.17
SIX4-201ENST00000216513 SLC38A8A6NNN8 435 aa14.02□□□□□ -0.17
SIX4-201ENST00000216513 NUDT14O95848 222 aa14.02□□□□□ -0.17
SIX4-201ENST00000216513 FAM228BP0C875 321 aa14.02□□□□□ -0.17
SIX4-201ENST00000216513 HLA-DPA1P20036 260 aa14.02□□□□□ -0.17
SIX4-201ENST00000216513 HDAC4P56524 1084 aa14.02□□□□□ -0.17
SIX4-201ENST00000216513 PPP3CAQ08209 521 aa14.02□□□□□ -0.17
SIX4-201ENST00000216513 VITQ6UXI7 678 aa14.02□□□□□ -0.17
SIX4-201ENST00000216513 CEP19Q96LK0 163 aa14.02□□□□□ -0.17
SIX4-201ENST00000216513 ERGIC2Q96RQ1 377 aa14.02□□□□□ -0.17
SIX4-201ENST00000216513 DERAQ9Y315 318 aa14.02□□□□□ -0.17
SIX4-201ENST00000216513 ZSCAN5CA6NGD5 496 aaPredicted RBP14.02□□□□□ -0.17
SIX4-201ENST00000216513 PIAS1O75925 651 aa14.02□□□□□ -0.17
SIX4-201ENST00000216513 KELP23276 732 aa14.02□□□□□ -0.17
SIX4-201ENST00000216513 PRUNE1Q86TP1 453 aa14.02□□□□□ -0.17
SIX4-201ENST00000216513 PRCCQ92733 491 aaPredicted RBP14.02□□□□□ -0.17
SIX4-201ENST00000216513 RERGLQ9H628 205 aa14.02□□□□□ -0.17
SIX4-201ENST00000216513 ELOVL2Q9NXB9 296 aa14.02□□□□□ -0.17
SIX4-201ENST00000216513 FAM153AQ9UHL3 310 aa14.02□□□□□ -0.17
SIX4-201ENST00000216513 SDR42E2A6NKP2 422 aa14.01□□□□□ -0.17
SIX4-201ENST00000216513 ERI2A8K979 691 aaKnown RBP14.01□□□□□ -0.17
SIX4-201ENST00000216513 FGF10O15520 208 aaPredicted RBP14.01□□□□□ -0.17
SIX4-201ENST00000216513 SERPINB9P50453 376 aa14.01□□□□□ -0.17
SIX4-201ENST00000216513 CBX2Q14781 532 aaPredicted RBP14.01□□□□□ -0.17
SIX4-201ENST00000216513 NT5DC1Q5TFE4 455 aa14.01□□□□□ -0.17
SIX4-201ENST00000216513 TMCO2Q7Z6W1 182 aaPredicted RBP14.01□□□□□ -0.17
SIX4-201ENST00000216513 LONP2Q86WA8 852 aa14.01□□□□□ -0.17
SIX4-201ENST00000216513 ARMC2Q8NEN0 867 aa14.01□□□□□ -0.17
SIX4-201ENST00000216513 TSPAN18Q96SJ8 248 aa14.01□□□□□ -0.17
SIX4-201ENST00000216513 MORF4L1Q9UBU8 362 aa14.01□□□□□ -0.17
SIX4-201ENST00000216513 CAPN6Q9Y6Q1 641 aa14.01□□□□□ -0.17
SIX4-201ENST00000216513 C1orf232A0A0U1RR37 186 aa14.01□□□□□ -0.17
SIX4-201ENST00000216513 ISM1B1AKI9 464 aa14.01□□□□□ -0.17
SIX4-201ENST00000216513 GOLGA8TH3BQL2 631 aa14.01□□□□□ -0.17
SIX4-201ENST00000216513 ANGPT2O15123 496 aa14.01□□□□□ -0.17
SIX4-201ENST00000216513 SKAP2O75563 359 aaPredicted RBP14.01□□□□□ -0.17
SIX4-201ENST00000216513 TYMPP19971 482 aa14.01□□□□□ -0.17
SIX4-201ENST00000216513 ATP6V1E1P36543 226 aa14.01□□□□□ -0.17
SIX4-201ENST00000216513 NCKAP1LP55160 1127 aa14.01□□□□□ -0.17
SIX4-201ENST00000216513 LRRC32Q14392 662 aa14.01□□□□□ -0.17
SIX4-201ENST00000216513 CNGA2Q16280 664 aa14.01□□□□□ -0.17
SIX4-201ENST00000216513 CES3Q6UWW8 571 aa14.01□□□□□ -0.17
SIX4-201ENST00000216513 TMEM192Q8IY95 271 aa14.01□□□□□ -0.17
SIX4-201ENST00000216513 NIFKQ9BYG3 293 aaKnown RBP14.01□□□□□ -0.17
SIX4-201ENST00000216513 RUVBL2Q9Y230 463 aaKnown RBP14.01□□□□□ -0.17
SIX4-201ENST00000216513 RHPN2P1A8MT19 583 aa14.01□□□□□ -0.17
SIX4-201ENST00000216513 PROSCO94903 275 aa14.01□□□□□ -0.17
SIX4-201ENST00000216513 CHI3L1P36222 383 aaPredicted RBP14.01□□□□□ -0.17
SIX4-201ENST00000216513 CLK2P49760 499 aaKnown RBP14.01□□□□□ -0.17
SIX4-201ENST00000216513 AGAP9Q5VTM2 703 aa14.01□□□□□ -0.17
SIX4-201ENST00000216513 NDRG1Q92597 394 aaKnown RBP14.01□□□□□ -0.17
SIX4-201ENST00000216513 TBL1YQ9BQ87 522 aa14.01□□□□□ -0.17
SIX4-201ENST00000216513 DPEP2Q9H4A9 486 aa14.01□□□□□ -0.17
SIX4-201ENST00000216513 PRDM12Q9H4Q4 367 aa14.01□□□□□ -0.17
SIX4-201ENST00000216513 SCOCQ9UIL1 159 aa14.01□□□□□ -0.17
SIX4-201ENST00000216513 SNAI1O95863 264 aaPredicted RBP14.01□□□□□ -0.17
SIX4-201ENST00000216513 CENPPQ6IPU0 288 aa14.01□□□□□ -0.17
SIX4-201ENST00000216513 ING2Q9H160 280 aa14.01□□□□□ -0.17
SIX4-201ENST00000216513 OSBPL2Q9H1P3 480 aa14.01□□□□□ -0.17
SIX4-201ENST00000216513 SIRPGQ9P1W8 387 aa14.01□□□□□ -0.17
SIX4-201ENST00000216513 SPATA31C1P0DKV0 1188 aa14.01□□□□□ -0.17
SIX4-201ENST00000216513 MLNP12872 115 aa14.01□□□□□ -0.17
SIX4-201ENST00000216513 VPS37AQ8NEZ2 397 aa14.01□□□□□ -0.17
SIX4-201ENST00000216513 TBCBQ99426 244 aa14.01□□□□□ -0.17
SIX4-201ENST00000216513 LPIN3Q9BQK8 851 aa14.01□□□□□ -0.17
SIX4-201ENST00000216513 ZSWIM1Q9BR11 485 aa14.01□□□□□ -0.17
SIX4-201ENST00000216513 ARHGAP9Q9BRR9 750 aa14.01□□□□□ -0.17
SIX4-201ENST00000216513 TNKS2Q9H2K2 1166 aa14.01□□□□□ -0.17
SIX4-201ENST00000216513 A0A087X0B3 334 aa14□□□□□ -0.17
SIX4-201ENST00000216513 LAMTOR5O43504 91 aa14□□□□□ -0.17
SIX4-201ENST00000216513 SUPT7LO94864 414 aa14□□□□□ -0.17
SIX4-201ENST00000216513 C1RP00736 705 aa14□□□□□ -0.17
SIX4-201ENST00000216513 ITIH2P19823 946 aa14□□□□□ -0.17
SIX4-201ENST00000216513 KCNA3P22001 575 aa14□□□□□ -0.17
SIX4-201ENST00000216513 FMO4P31512 558 aa14□□□□□ -0.17
SIX4-201ENST00000216513 TRADDQ15628 312 aa14□□□□□ -0.17
SIX4-201ENST00000216513 C12orf76Q8N812 135 aaPredicted RBP14□□□□□ -0.17
SIX4-201ENST00000216513 SH3RF2Q8TEC5 729 aa14□□□□□ -0.17
SIX4-201ENST00000216513 BSNDQ8WZ55 320 aa14□□□□□ -0.17
SIX4-201ENST00000216513 SYN2Q92777 582 aaPredicted RBP14□□□□□ -0.17
SIX4-201ENST00000216513 ZFYVE19Q96K21 471 aa14□□□□□ -0.17
SIX4-201ENST00000216513 ASB8Q9H765 288 aa14□□□□□ -0.17
SIX4-201ENST00000216513 SLC29A2Q14542 456 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms