RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Evi2bQ8VD58 444 aa16.87■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Pcdhb16Q91Y03 802 aa16.87■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 JcadQ5DTX6 1320 aa16.87■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Mtco1P00397 514 aa16.87■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Svs6Q64356 99 aa16.87■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Kiaa0319lQ8K135 1048 aa16.87■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Ddx20Q9JJY4 825 aaKnown RBP16.87■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Limd1Q9QXD8 668 aa16.87■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Tcf3P15806 651 aa16.87■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 CremP27699 357 aa16.87■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Zfp560Q3URI6 754 aa16.87■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Uba3Q8C878 462 aa16.87■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Olfr1302Q8VGE9 315 aa16.87■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Efcab1Q9D3N2 212 aa16.87■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Cdc42ep4Q9JM96 349 aaKnown RBP16.87■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Arhgap33Q80YF9 1305 aa16.87■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Slc38a5Q3U1J0 479 aa16.87■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Sh3kbp1Q8R550 709 aaKnown RBP16.87■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Tnfrsf21Q9EPU5 655 aa16.87■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Sema5aQ62217 1077 aa16.87■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Klhl5Q6PFE1 708 aa16.87■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Stk4Q9JI11 487 aa16.87■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Celf5D3Z4T1 395 aaKnown RBP16.87■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Rc3h2P0C090 1187 aaKnown RBP16.87■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Mettl21cQ8BLU2 248 aa16.87■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Acvr1cQ8K348 493 aa16.87■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Adgre4Q91ZE5 689 aa16.87■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 St7Q99M96 577 aa16.87■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Josd2Q9CR30 188 aa16.87■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Serpina1fQ9DCQ7 411 aa16.87■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Muc1Q02496 630 aa16.87■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Pcnx4Q3UVY5 1174 aa16.87■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Klhl23Q6GQU2 558 aa16.87■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 TbcdQ8BYA0 1196 aa16.87■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Pcdhgb5Q91XX5 926 aa16.87■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 PlekQ9JHK5 350 aaKnown RBP16.87■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Mettl1Q9Z120 268 aa16.87■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 2210011C24RikA0A087WQ89 206 aa16.86■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Slc16a6B1AT66 607 aa16.86■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Pik3r2O08908 722 aa16.86■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Iqcf4Q6P8Y2 204 aa16.86■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Dsg1bQ7TSF1 1060 aa16.86■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 UstQ8BUB6 407 aa16.86■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Rhox13F6YCR7 232 aa16.86■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 AurkaP97477 395 aa16.86■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Olfr449Q8VGW8 311 aa16.86■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Btbd18A0A0A6YY25 723 aa16.86■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 PtpaP58389 323 aa16.86■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 LcorlQ3U285 600 aa16.86■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Vsx2Q61412 361 aa16.86■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Frmd5Q6P5H6 517 aa16.86■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Fbxo42Q6PDJ6 717 aa16.86■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 RybpQ8CCI5 228 aa16.86■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Colec12Q8K4Q8 742 aa16.86■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Gpn3Q9D3W4 284 aa16.86■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Izumo2Q9DA16 220 aa16.86■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Entpd5Q9WUZ9 427 aa16.86■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Gas2P11862 314 aaKnown RBP16.86■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Ptpn11P35235 597 aa16.86■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Rmdn3Q3UJU9 470 aa16.86■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Olfr293Q7TS10 336 aa16.86■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Bdh2Q8JZV9 245 aa16.86■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 ToporslQ9D2F8 683 aa16.86■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Mapk9Q9WTU6 423 aa16.86■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 CluhQ5SW19 1315 aa16.86■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Ccdc8D3YZV8 685 aa16.86■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Gm6460F6YJZ8 199 aa16.86■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Rin3P59729 980 aa16.86■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Atl1Q8BH66 558 aa16.86■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Retreg1dQ8VE91 480 aa16.86■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Kif12Q9D2Z8 642 aa16.86■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Fut8Q9WTS2 575 aa16.86■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Kdelc2G5E897 503 aa16.86■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Nlrc4Q3UP24 1024 aa16.86■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Orm1Q60590 207 aa16.86■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 SyncripQ7TMK9 623 aaKnown RBP16.86■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Kct2Q8K201 259 aa16.86■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Eef1akmt2Q9D853 244 aa16.86■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Abcc10Q8R4P9 1501 aa16.86■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 DnmbpQ6TXD4 1580 aa16.86■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Kcnu1O54982 1121 aa16.86■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Plekha7Q3UIL6 1118 aaKnown RBP16.86■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 McubQ810S1 345 aa16.86■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Pex26Q8BGI5 305 aa16.86■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Pgm5Q8BZF8 567 aa16.86■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Nudt14Q9D142 222 aa16.86■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Tmem86aQ9D8N3 241 aa16.86■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Tbx18Q9EPZ6 613 aa16.86■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Creb3l1Q9Z125 519 aa16.86■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Rap1gapA2ALS5 663 aa16.85■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Gm3033M0QWI0 180 aa16.85■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Gm3532M0QWL4 194 aa16.85■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 SagP20443 403 aa16.85■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Lama4P97927 1816 aa16.85■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Kbtbd8Q3UQV5 599 aa16.85■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Tas2r115Q7M719 310 aa16.85■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Olfr670Q7TRP3 312 aa16.85■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Smndc1Q8BGT7 238 aaKnown RBP16.85■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Gprc5bQ923Z0 410 aa16.85■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 SvilQ8K4L3 2170 aa16.85■□□□□ 0.29
Retrieved 100 of 22,080 RNA–protein pairs in 21.2 ms