RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Nr2c1Q505F1 590 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Ipcef1Q5DU31 406 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Rbl1Q64701 1063 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Nudcd1Q6PIP5 582 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Enpp4Q8BTJ4 456 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Fam151aQ8QZW3 608 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Gm6685D3YYP3 228 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 TpbpaP13438 124 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Il1rl1P14719 567 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Slc1a2P43006 572 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Ppp3cbP48453 525 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Ptchd3Q0EEE2 906 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Pik3r6Q3U6Q4 756 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Sel1l2Q3V172 688 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Ggnbp1Q6K1E7 370 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Dusp4Q8BFV3 398 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Ticam2Q8BJQ4 232 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Abraxas1Q8BPZ8 407 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Gpr63Q9EQQ3 425 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Il1aP01582 270 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 LynP25911 512 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Hist2h2acQ64523 129 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Hist2h2aa1Q6GSS7 130 aaKnown RBP10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Tcaf1Q8BNE1 924 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Appl1Q8K3H0 707 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Pcdhb10Q91VE5 797 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Adcy4Q91WF3 1077 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Acot13Q9CQR4 140 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Snx7Q9CY18 387 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Hes6Q9JHE6 224 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Khdrbs3Q9R226 346 aaKnown RBP10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Gm5799E9Q2M1 201 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Cd36Q08857 472 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Lipo3Q3UT41 399 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Marveld2Q3UZP0 555 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Arhgef33Q8BW86 850 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Slc22a19Q8VCA0 551 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Mta3Q924K8 591 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Taldo1Q93092 337 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Rwdd4Q9CPR1 188 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Nos1apQ9D3A8 503 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Tfr2Q9JKX3 798 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Ulk2Q9QY01 1037 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 PignQ9R1S3 931 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 NhsB1AV60 1647 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Gm5072A2AHM1 344 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Morf4l1P60762 362 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Fam198aQ3UY90 562 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Tdpoz3Q717B4 365 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 SyncripQ7TMK9 623 aaKnown RBP10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Smco1Q8CEZ1 214 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Bdh2Q8JZV9 245 aa10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Pitrm1Q8K411 1036 aaKnown RBP10.32□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Lcn6A2AJB9 181 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Mtx3D3YTP3 312 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Hps1O08983 704 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 ArP19091 899 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Snx27Q3UHD6 539 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Olfr1057Q7TR75 315 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Reep1Q8BGH4 201 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Nars2Q8BGV0 477 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Cdkn2aipQ8BI72 563 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Kiaa0319lQ8K135 1048 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Tdrd3Q91W18 743 aaKnown RBP10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Sf3b1Q99NB9 1304 aaKnown RBP10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Sec14l1A8Y5H7 715 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Ildr2B5TVM2 661 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Lrrc10bG3XA50 292 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Vmn2r5K7N788 911 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Vmn2r31L7N1Z4 861 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Bnc1O35914 961 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Cdh5P55284 784 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Plekhf1Q3TB82 279 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Trappc9Q3U0M1 1148 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 HpseQ6YGZ1 535 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Eno4Q8C042 619 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 PrkxQ922R0 355 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Rassf3Q99P51 232 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Tex22Q9D9U4 189 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Clec4aQ9QZ15 238 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Sae1Q9R1T2 350 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Pnldc1B2RXZ1 531 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Mybpc1D3YU50 1127 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Cdh18E9Q9Q6 790 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Ncam2O35136 837 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Ppp3caP63328 521 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Mtnr1aQ61184 353 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Glt8d2Q640P4 349 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 VwdeQ6DFV8 926 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Cand2Q6ZQ73 1235 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Slitrk2Q810C0 846 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Vmn1r191Q8K4D0 298 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Actr8Q8R2S9 624 aaKnown RBP10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Tcirg1Q9JHF5 834 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Cd97Q9Z0M6 818 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 BC030870Q3V2G4 71 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Zfp512bQ6PHP4 879 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Lpcat2Q8BYI6 544 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Slc39a13Q8BZH0 361 aa10.31□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Snx15Q91WE1 337 aa10.31□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 27.2 ms