RNA–Protein interactions for RNA: YMR173W

DDR48, Transcript of DNA damage-responsive protein, yeastyeast

Gene DDR48, Length 1,293 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDR48YMR173W SOG2Q08817 791 aa5.42□□□□□ -1.54
DDR48YMR173W MSB1P21339 1137 aaKnown RBP5.41□□□□□ -1.54
DDR48YMR173W SEA4P38164 1038 aa5.41□□□□□ -1.54
DDR48YMR173W POL5P39985 1022 aaKnown RBP5.41□□□□□ -1.54
DDR48YMR173W NCE103P53615 221 aa5.41□□□□□ -1.54
DDR48YMR173W MAE1P36013 669 aaKnown RBP5.4□□□□□ -1.54
DDR48YMR173W ALD3P54114 506 aa5.4□□□□□ -1.54
DDR48YMR173W RNQ1P25367 405 aa5.39□□□□□ -1.55
DDR48YMR173W UBP5P39944 805 aa5.39□□□□□ -1.55
DDR48YMR173W DMA2P53924 522 aa5.39□□□□□ -1.55
DDR48YMR173W FUS1P11710 512 aa5.37□□□□□ -1.55
DDR48YMR173W SDH1Q00711 640 aa5.37□□□□□ -1.55
DDR48YMR173W ELG1Q12050 791 aa5.37□□□□□ -1.55
DDR48YMR173W LRG1P35688 1017 aa5.36□□□□□ -1.55
DDR48YMR173W YBR287WP38355 427 aa5.36□□□□□ -1.55
DDR48YMR173W AIM46P38885 310 aa5.36□□□□□ -1.55
DDR48YMR173W SPO71Q03868 1245 aa5.36□□□□□ -1.55
DDR48YMR173W PUN1Q06991 263 aa5.36□□□□□ -1.55
DDR48YMR173W ERS1P17261 260 aa5.35□□□□□ -1.55
DDR48YMR173W SEG2P34250 1132 aa5.35□□□□□ -1.55
DDR48YMR173W FIR1P40020 876 aa5.35□□□□□ -1.55
DDR48YMR173W HXT8P40886 569 aa5.35□□□□□ -1.55
DDR48YMR173W PUF6Q04373 656 aaKnown RBP5.35□□□□□ -1.55
DDR48YMR173W BOI1P38041 980 aaKnown RBP5.34□□□□□ -1.55
DDR48YMR173W RGD2P43556 714 aa5.34□□□□□ -1.55
DDR48YMR173W KIP3P53086 805 aaKnown RBP5.34□□□□□ -1.55
DDR48YMR173W GCD1P09032 578 aaPredicted RBP5.33□□□□□ -1.56
DDR48YMR173W PUP1P25043 261 aa5.33□□□□□ -1.56
DDR48YMR173W YNR065CP53751 1116 aa5.33□□□□□ -1.56
DDR48YMR173W GIC2Q06648 383 aa5.33□□□□□ -1.56
DDR48YMR173W SRS2P12954 1174 aa5.32□□□□□ -1.56
DDR48YMR173W CPS1P27614 576 aa5.32□□□□□ -1.56
DDR48YMR173W KTR2P33550 425 aa5.32□□□□□ -1.56
DDR48YMR173W NEO1P40527 1151 aa5.32□□□□□ -1.56
DDR48YMR173W YJR124CP47159 448 aa5.32□□□□□ -1.56
DDR48YMR173W HVG1P0CE11 249 aa5.31□□□□□ -1.56
DDR48YMR173W POL12P38121 705 aaPredicted RBP5.31□□□□□ -1.56
DDR48YMR173W NIT1P40447 199 aa5.31□□□□□ -1.56
DDR48YMR173W HAS1Q03532 505 aaKnown RBP5.31□□□□□ -1.56
DDR48YMR173W NTA1P40354 457 aa5.3□□□□□ -1.56
DDR48YMR173W ECL1P48235 211 aa5.3□□□□□ -1.56
DDR48YMR173W APC11Q12157 165 aa5.29□□□□□ -1.56
DDR48YMR173W GLO4Q12320 285 aa5.29□□□□□ -1.56
DDR48YMR173W DFG16Q99234 619 aa5.29□□□□□ -1.56
DDR48YMR173W SUT1P53032 299 aaKnown RBP5.28□□□□□ -1.56
DDR48YMR173W CWC15Q03772 175 aaKnown RBP5.28□□□□□ -1.56
DDR48YMR173W YCR015CP25616 317 aa5.27□□□□□ -1.57
DDR48YMR173W FAR11P53917 953 aa5.27□□□□□ -1.57
DDR48YMR173W TIF6Q12522 245 aaKnown RBP5.27□□□□□ -1.57
DDR48YMR173W MMM1P41800 426 aa5.26□□□□□ -1.57
DDR48YMR173W WHI3P34761 661 aaKnown RBP5.25□□□□□ -1.57
DDR48YMR173W RAD55P38953 406 aa5.25□□□□□ -1.57
DDR48YMR173W FET4P40988 552 aa5.25□□□□□ -1.57
DDR48YMR173W YOR223WQ12015 292 aa5.25□□□□□ -1.57
DDR48YMR173W PYC2P32327 1180 aaKnown RBP5.24□□□□□ -1.57
DDR48YMR173W YKL222CP35995 705 aa5.24□□□□□ -1.57
DDR48YMR173W GPT2P36148 743 aa5.24□□□□□ -1.57
DDR48YMR173W YHL008CP38750 627 aa5.24□□□□□ -1.57
DDR48YMR173W PSY2P40164 858 aa5.24□□□□□ -1.57
DDR48YMR173W CIT3P43635 486 aa5.24□□□□□ -1.57
DDR48YMR173W RPB10P22139 70 aa5.23□□□□□ -1.57
DDR48YMR173W GAS1P22146 559 aaKnown RBP5.23□□□□□ -1.57
DDR48YMR173W IRS4P36115 615 aaKnown RBP5.23□□□□□ -1.57
DDR48YMR173W PRP43P53131 767 aaKnown RBP5.23□□□□□ -1.57
DDR48YMR173W YML083CQ04526 418 aa5.23□□□□□ -1.57
DDR48YMR173W PNP1Q05788 311 aa5.23□□□□□ -1.57
DDR48YMR173W RRN6P32786 894 aa5.22□□□□□ -1.57
DDR48YMR173W YMR074CQ04773 145 aa5.22□□□□□ -1.57
DDR48YMR173W ESC8Q08119 714 aa5.22□□□□□ -1.57
DDR48YMR173W NSI1Q12457 570 aa5.22□□□□□ -1.57
DDR48YMR173W SSA4P22202 642 aaKnown RBP5.21□□□□□ -1.58
DDR48YMR173W HSP78P33416 811 aa5.21□□□□□ -1.58
DDR48YMR173W RCM1P53972 490 aa5.21□□□□□ -1.58
DDR48YMR173W CDA2Q06703 312 aa5.21□□□□□ -1.58
DDR48YMR173W SMC1P32908 1225 aa5.2□□□□□ -1.58
DDR48YMR173W TSA1P34760 196 aaKnown RBP5.2□□□□□ -1.58
DDR48YMR173W OYE3P41816 400 aaPredicted RBP5.2□□□□□ -1.58
DDR48YMR173W YOR059CQ08448 450 aaKnown RBP5.2□□□□□ -1.58
DDR48YMR173W LSO1Q3E827 93 aa5.2□□□□□ -1.58
DDR48YMR173W TAF1P46677 1066 aa5.19□□□□□ -1.58
DDR48YMR173W DOT1Q04089 582 aaKnown RBP5.19□□□□□ -1.58
DDR48YMR173W CTR9P89105 1077 aa5.17□□□□□ -1.58
DDR48YMR173W NOB1Q08444 459 aaKnown RBP5.17□□□□□ -1.58
DDR48YMR173W YLL054CQ12244 843 aa5.17□□□□□ -1.58
DDR48YMR173W THI80P35202 319 aa5.16□□□□□ -1.58
DDR48YMR173W GCV1P48015 400 aa5.16□□□□□ -1.58
DDR48YMR173W RLF2Q12495 606 aa5.16□□□□□ -1.58
DDR48YMR173W GIP4P39732 760 aa5.15□□□□□ -1.59
DDR48YMR173W YIG1Q08956 461 aa5.15□□□□□ -1.59
DDR48YMR173W RPS4AP0CX35 261 aaKnown RBP5.14□□□□□ -1.59
DDR48YMR173W RPS4BP0CX36 261 aaKnown RBP5.14□□□□□ -1.59
DDR48YMR173W ORC3P54790 616 aa5.14□□□□□ -1.59
DDR48YMR173W COBP00163 385 aa5.13□□□□□ -1.59
DDR48YMR173W ADP1P25371 1049 aa5.13□□□□□ -1.59
DDR48YMR173W HTS1P07263 546 aaKnown RBP5.12□□□□□ -1.59
DDR48YMR173W BOL3P39724 118 aa5.12□□□□□ -1.59
DDR48YMR173W ALT1P52893 592 aa5.12□□□□□ -1.59
DDR48YMR173W EAR1Q03212 550 aa5.12□□□□□ -1.59
DDR48YMR173W SSY1Q03770 852 aa5.12□□□□□ -1.59
DDR48YMR173W CMR1Q12510 522 aaKnown RBP5.12□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms