RNA–Protein interactions for RNA: YMR078C

CTF18, Transcript of Subunit of a complex with Ctf8p, yeastyeast

Gene CTF18, Length 2,226 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF18YMR078C MAG2Q06436 670 aaKnown RBP7.59□□□□□ -1.19
CTF18YMR078C MSH6Q03834 1242 aa7.58□□□□□ -1.2
CTF18YMR078C PRP40P33203 583 aaKnown RBP7.58□□□□□ -1.2
CTF18YMR078C ORC1P54784 914 aaPredicted RBP7.58□□□□□ -1.2
CTF18YMR078C JIP5Q06214 492 aaPredicted RBP7.58□□□□□ -1.2
CTF18YMR078C RAD2P07276 1031 aa7.56□□□□□ -1.2
CTF18YMR078C PPT1P53043 513 aa7.56□□□□□ -1.2
CTF18YMR078C NUT1P53114 1132 aa7.56□□□□□ -1.2
CTF18YMR078C YIR007WP40566 764 aa7.56□□□□□ -1.2
CTF18YMR078C MRP10O75012 95 aa7.55□□□□□ -1.2
CTF18YMR078C ACO2P39533 789 aa7.55□□□□□ -1.2
CTF18YMR078C MON1P53129 644 aa7.55□□□□□ -1.2
CTF18YMR078C KRE33P53914 1056 aaKnown RBP7.55□□□□□ -1.2
CTF18YMR078C YMR265CQ03508 461 aaKnown RBP7.55□□□□□ -1.2
CTF18YMR078C MCM5P29496 775 aaKnown RBP7.54□□□□□ -1.2
CTF18YMR078C RIM11P38615 370 aa7.54□□□□□ -1.2
CTF18YMR078C SAP155P43612 1002 aa7.54□□□□□ -1.2
CTF18YMR078C RMD1Q03441 430 aa7.54□□□□□ -1.2
CTF18YMR078C ALD3P54114 506 aa7.54□□□□□ -1.2
CTF18YMR078C YPL109CQ02981 657 aa7.54□□□□□ -1.2
CTF18YMR078C HEH2Q03281 663 aa7.54□□□□□ -1.2
CTF18YMR078C RPP1AP05318 106 aaPredicted RBP7.53□□□□□ -1.2
CTF18YMR078C ESF1Q06344 628 aaKnown RBP7.53□□□□□ -1.2
CTF18YMR078C CMR1Q12510 522 aaKnown RBP7.53□□□□□ -1.2
CTF18YMR078C PEP7P32609 515 aa7.52□□□□□ -1.2
CTF18YMR078C PRK1P40494 810 aa7.52□□□□□ -1.2
CTF18YMR078C ULP1Q02724 621 aa7.52□□□□□ -1.2
CTF18YMR078C TY1A-DR2Q03964 440 aaKnown RBP7.52□□□□□ -1.2
CTF18YMR078C YDR461C-AQ2V2P7 80 aa7.52□□□□□ -1.2
CTF18YMR078C FUS1P11710 512 aa7.52□□□□□ -1.21
CTF18YMR078C TFA2P36145 328 aa7.52□□□□□ -1.21
CTF18YMR078C ADE12P80210 433 aaKnown RBP7.52□□□□□ -1.21
CTF18YMR078C SYT1Q06836 1226 aa7.52□□□□□ -1.21
CTF18YMR078C PRE9P23638 258 aaKnown RBP7.51□□□□□ -1.21
CTF18YMR078C FPS1P23900 669 aa7.51□□□□□ -1.21
CTF18YMR078C PIC2P40035 300 aa7.51□□□□□ -1.21
CTF18YMR078C VPS16Q03308 798 aa7.51□□□□□ -1.21
CTF18YMR078C HVG1P0CE11 249 aa7.51□□□□□ -1.21
CTF18YMR078C INP51P40559 946 aaKnown RBP7.51□□□□□ -1.21
CTF18YMR078C CAF120P53836 1060 aa7.51□□□□□ -1.21
CTF18YMR078C ECM2P38241 364 aaKnown RBP7.5□□□□□ -1.21
CTF18YMR078C AMN1P38285 549 aaPredicted RBP7.5□□□□□ -1.21
CTF18YMR078C YJL181WP46987 611 aa7.5□□□□□ -1.21
CTF18YMR078C LYS5P50113 272 aa7.5□□□□□ -1.21
CTF18YMR078C PIN2Q12057 282 aa7.5□□□□□ -1.21
CTF18YMR078C GLO4Q12320 285 aa7.5□□□□□ -1.21
CTF18YMR078C PRP5P21372 849 aaPredicted RBP7.5□□□□□ -1.21
CTF18YMR078C NPR1P22211 790 aa7.5□□□□□ -1.21
CTF18YMR078C RVS167P39743 482 aaKnown RBP7.5□□□□□ -1.21
CTF18YMR078C BIO5P53744 561 aaKnown RBP7.49□□□□□ -1.21
CTF18YMR078C ADI1Q03677 179 aa7.49□□□□□ -1.21
CTF18YMR078C YAF9P53930 226 aa7.48□□□□□ -1.21
CTF18YMR078C RSC2Q06488 889 aa7.48□□□□□ -1.21
CTF18YMR078C YDL176WQ12027 708 aa7.48□□□□□ -1.21
CTF18YMR078C MCD1Q12158 566 aa7.48□□□□□ -1.21
CTF18YMR078C MRPS18P42847 217 aa7.48□□□□□ -1.21
CTF18YMR078C PMT7Q06644 662 aa7.48□□□□□ -1.21
CTF18YMR078C KAR2P16474 682 aaKnown RBP7.47□□□□□ -1.21
CTF18YMR078C ALD6P54115 500 aaKnown RBP7.47□□□□□ -1.21
CTF18YMR078C PET112P33893 541 aa7.46□□□□□ -1.22
CTF18YMR078C CEM1P39525 442 aa7.46□□□□□ -1.22
CTF18YMR078C YJR124CP47159 448 aa7.46□□□□□ -1.22
CTF18YMR078C YNR065CP53751 1116 aa7.46□□□□□ -1.22
CTF18YMR078C OCA5P38738 679 aa7.45□□□□□ -1.22
CTF18YMR078C NAP1P25293 417 aaKnown RBP7.44□□□□□ -1.22
CTF18YMR078C DUT1P33317 147 aa7.44□□□□□ -1.22
CTF18YMR078C MNR2P35724 969 aa7.44□□□□□ -1.22
CTF18YMR078C SOG2Q08817 791 aa7.44□□□□□ -1.22
CTF18YMR078C HEM13P11353 328 aaKnown RBP7.44□□□□□ -1.22
CTF18YMR078C MAD1P40957 749 aa7.44□□□□□ -1.22
CTF18YMR078C VAC8P39968 578 aa7.43□□□□□ -1.22
CTF18YMR078C NOG1Q02892 647 aaKnown RBP7.43□□□□□ -1.22
CTF18YMR078C LSB6P42951 607 aa7.43□□□□□ -1.22
CTF18YMR078C GCR1P07261 785 aa7.42□□□□□ -1.22
CTF18YMR078C CLN2P20438 545 aa7.41□□□□□ -1.22
CTF18YMR078C GNP1P48813 663 aa7.41□□□□□ -1.22
CTF18YMR078C CDC34P14682 295 aa7.4□□□□□ -1.22
CTF18YMR078C PDC5P16467 563 aaKnown RBP7.4□□□□□ -1.22
CTF18YMR078C GAR1P28007 205 aaKnown RBP7.4□□□□□ -1.22
CTF18YMR078C PEX28P38848 579 aa7.4□□□□□ -1.22
CTF18YMR078C RSM26P47141 266 aa7.4□□□□□ -1.22
CTF18YMR078C MSH3P25336 1018 aa7.4□□□□□ -1.23
CTF18YMR078C YGL140CP53120 1219 aa7.4□□□□□ -1.23
CTF18YMR078C GPM1P00950 247 aaKnown RBP7.39□□□□□ -1.23
CTF18YMR078C EXO5P38289 585 aa7.39□□□□□ -1.23
CTF18YMR078C TY1A-LR4P0C2I8 440 aaKnown RBP7.39□□□□□ -1.23
CTF18YMR078C TY1A-DR6P0CX70 440 aa7.39□□□□□ -1.23
CTF18YMR078C TY1A-ER1P0CX71 440 aa7.39□□□□□ -1.23
CTF18YMR078C TY1A-LR2P0CX72 440 aa7.39□□□□□ -1.23
CTF18YMR078C TY1A-PLP0CX73 440 aa7.39□□□□□ -1.23
CTF18YMR078C TY1A-JR1P0CX74 440 aa7.39□□□□□ -1.23
CTF18YMR078C TY1A-LR3P0CX75 440 aa7.39□□□□□ -1.23
CTF18YMR078C TY1A-ML2P0CX76 440 aa7.39□□□□□ -1.23
CTF18YMR078C XKS1P42826 600 aa7.39□□□□□ -1.23
CTF18YMR078C FAA4P47912 694 aaKnown RBP7.39□□□□□ -1.23
CTF18YMR078C PEX13P80667 386 aa7.39□□□□□ -1.23
CTF18YMR078C HAS1Q03532 505 aaKnown RBP7.39□□□□□ -1.23
CTF18YMR078C TY1A-GR1Q12085 440 aa7.39□□□□□ -1.23
CTF18YMR078C TY1A-PR3Q6Q5H1 440 aaKnown RBP7.39□□□□□ -1.23
CTF18YMR078C TY1A-OLQ92392 440 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms