RNA–Protein interactions for RNA: YLL016W

SDC25, Transcript of Non-essential Ras guanine nucleotide exchange factor (GEF), yeastyeast

Gene SDC25, Length 3,147 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDC25YLL016W MDG1P53885 366 aa3.16□□□□□ -1.9
SDC25YLL016W PEX29Q03370 554 aa3.16□□□□□ -1.9
SDC25YLL016W YLR125WQ12138 136 aa3.16□□□□□ -1.9
SDC25YLL016W YPR015CQ12531 247 aa3.16□□□□□ -1.9
SDC25YLL016W CYT1P07143 309 aa3.15□□□□□ -1.9
SDC25YLL016W RPA14P50106 137 aa3.15□□□□□ -1.9
SDC25YLL016W SAM37P50110 327 aa3.15□□□□□ -1.9
SDC25YLL016W WSC3Q12215 556 aa3.15□□□□□ -1.9
SDC25YLL016W CYC8P14922 966 aa3.15□□□□□ -1.91
SDC25YLL016W CIC1P38779 376 aaKnown RBP3.15□□□□□ -1.91
SDC25YLL016W ULI1P43604 169 aa3.15□□□□□ -1.91
SDC25YLL016W YGR122WP53272 402 aa3.15□□□□□ -1.91
SDC25YLL016W NAN1Q02931 896 aaKnown RBP3.15□□□□□ -1.91
SDC25YLL016W GCD11P32481 527 aaKnown RBP3.15□□□□□ -1.91
SDC25YLL016W VPS35P34110 944 aa3.15□□□□□ -1.91
SDC25YLL016W HDA3Q06623 655 aa3.15□□□□□ -1.91
SDC25YLL016W MPC54Q08550 464 aa3.15□□□□□ -1.91
SDC25YLL016W SUV3P32580 737 aa3.14□□□□□ -1.91
SDC25YLL016W SEC6P32844 805 aa3.14□□□□□ -1.91
SDC25YLL016W APL6P46682 809 aa3.14□□□□□ -1.91
SDC25YLL016W SPP1Q03012 353 aa3.14□□□□□ -1.91
SDC25YLL016W YPR084WQ06821 456 aa3.14□□□□□ -1.91
SDC25YLL016W YPR097WQ06839 1073 aa3.14□□□□□ -1.91
SDC25YLL016W ISU2Q12056 156 aa3.14□□□□□ -1.91
SDC25YLL016W RAD2P07276 1031 aa3.14□□□□□ -1.91
SDC25YLL016W SSD1P24276 1250 aaKnown RBP RIP-Chip data3.14□□□□□ -1.91not detected
SDC25YLL016W SEC61P32915 480 aa3.14□□□□□ -1.91
SDC25YLL016W HAL5P38970 855 aaKnown RBP3.14□□□□□ -1.91
SDC25YLL016W UBP12P39538 1254 aa3.14□□□□□ -1.91
SDC25YLL016W UBP9P39967 754 aa3.14□□□□□ -1.91
SDC25YLL016W FAA4P47912 694 aaKnown RBP3.14□□□□□ -1.91
SDC25YLL016W NOC3Q07896 663 aaPredicted RBP3.14□□□□□ -1.91
SDC25YLL016W IXR1P33417 597 aa3.13□□□□□ -1.91
SDC25YLL016W YBR197CP38306 217 aa3.13□□□□□ -1.91
SDC25YLL016W YMR074CQ04773 145 aa3.13□□□□□ -1.91
SDC25YLL016W YDL121CQ07541 149 aa3.13□□□□□ -1.91
SDC25YLL016W RPS6AP0CX37 236 aaKnown RBP3.13□□□□□ -1.91
SDC25YLL016W RPS6BP0CX38 236 aaPredicted RBP3.13□□□□□ -1.91
SDC25YLL016W SDH2P21801 266 aa3.13□□□□□ -1.91
SDC25YLL016W KIP2P28743 706 aa3.13□□□□□ -1.91
SDC25YLL016W SFP1P32432 683 aa3.13□□□□□ -1.91
SDC25YLL016W KXD1P53158 218 aa3.13□□□□□ -1.91
SDC25YLL016W FAL1Q12099 399 aaKnown RBP3.13□□□□□ -1.91
SDC25YLL016W ADR1P07248 1323 aa3.13□□□□□ -1.91
SDC25YLL016W ERP2P39704 215 aa3.13□□□□□ -1.91
SDC25YLL016W AIM21P40563 679 aa3.13□□□□□ -1.91
SDC25YLL016W FOL1P53848 824 aa3.13□□□□□ -1.91
SDC25YLL016W SEC2P17065 759 aa3.12□□□□□ -1.91
SDC25YLL016W PRE9P23638 258 aaKnown RBP3.12□□□□□ -1.91
SDC25YLL016W CHZ1P40019 153 aaPredicted RBP3.12□□□□□ -1.91
SDC25YLL016W MRPS18P42847 217 aa3.12□□□□□ -1.91
SDC25YLL016W STR2P47164 639 aa3.12□□□□□ -1.91
SDC25YLL016W TYW3P53177 273 aa3.12□□□□□ -1.91
SDC25YLL016W YNL035CP53962 389 aaKnown RBP3.12□□□□□ -1.91
SDC25YLL016W YNL011CP53980 444 aa3.12□□□□□ -1.91
SDC25YLL016W DNM1P54861 757 aa3.12□□□□□ -1.91
SDC25YLL016W CDC55Q00362 526 aa3.12□□□□□ -1.91
SDC25YLL016W BCK1Q01389 1478 aa3.12□□□□□ -1.91
SDC25YLL016W JIP4Q03361 876 aa3.12□□□□□ -1.91
SDC25YLL016W ATG20Q07528 640 aa3.12□□□□□ -1.91
SDC25YLL016W OSH2Q12451 1283 aa3.12□□□□□ -1.91
SDC25YLL016W GAL11P19659 1081 aa3.12□□□□□ -1.91
SDC25YLL016W RPA135P22138 1203 aaKnown RBP3.12□□□□□ -1.91
SDC25YLL016W UBP1P25037 809 aa3.12□□□□□ -1.91
SDC25YLL016W FAA3P39002 694 aa3.12□□□□□ -1.91
SDC25YLL016W YGR125WP53273 1036 aa3.12□□□□□ -1.91
SDC25YLL016W NMA111P53920 997 aa3.12□□□□□ -1.91
SDC25YLL016W CEF1Q03654 590 aaPredicted RBP3.12□□□□□ -1.91
SDC25YLL016W PML39Q03760 334 aa3.12□□□□□ -1.91
SDC25YLL016W DAL4Q04895 635 aa3.12□□□□□ -1.91
SDC25YLL016W RTG1P32607 177 aa3.11□□□□□ -1.91
SDC25YLL016W NGR1P32831 672 aaKnown RBP3.11□□□□□ -1.91
SDC25YLL016W OPI10Q08202 246 aa3.11□□□□□ -1.91
SDC25YLL016W FLC1Q08967 793 aa3.11□□□□□ -1.91
SDC25YLL016W EAP1P36041 632 aaKnown RBP3.11□□□□□ -1.91
SDC25YLL016W ISM1P48526 1002 aa3.11□□□□□ -1.91
SDC25YLL016W VMS1Q04311 632 aaKnown RBP3.11□□□□□ -1.91
SDC25YLL016W AGE1Q04412 482 aa3.11□□□□□ -1.91
SDC25YLL016W TMA64Q04600 565 aaKnown RBP3.11□□□□□ -1.91
SDC25YLL016W BSC2Q05611 235 aa3.11□□□□□ -1.91
SDC25YLL016W NOP14Q99207 810 aaKnown RBP3.11□□□□□ -1.91
SDC25YLL016W PDC1P06169 563 aaKnown RBP3.1□□□□□ -1.91
SDC25YLL016W SWI5P08153 709 aa3.1□□□□□ -1.91
SDC25YLL016W BAS1P22035 811 aa3.1□□□□□ -1.91
SDC25YLL016W TRX2P22803 104 aaKnown RBP3.1□□□□□ -1.91
SDC25YLL016W RAD27P26793 382 aa3.1□□□□□ -1.91
SDC25YLL016W KIP3P53086 805 aaKnown RBP3.1□□□□□ -1.91
SDC25YLL016W CAB1Q04430 367 aa3.1□□□□□ -1.91
SDC25YLL016W NYV1Q12255 253 aa3.1□□□□□ -1.91
SDC25YLL016W YRF1-2P40105 1681 aa3.1□□□□□ -1.91
SDC25YLL016W SPO75Q07798 868 aa3.1□□□□□ -1.91
SDC25YLL016W MCD1Q12158 566 aa3.1□□□□□ -1.91
SDC25YLL016W TY1A-DR4O74302 440 aa3.1□□□□□ -1.91
SDC25YLL016W TY1A-HP0C2I4 478 aaKnown RBP3.1□□□□□ -1.91
SDC25YLL016W ERR1P0CX10 437 aa3.1□□□□□ -1.91
SDC25YLL016W ERR2P0CX11 437 aa3.1□□□□□ -1.91
SDC25YLL016W TY1A-AP0CX57 440 aa3.1□□□□□ -1.91
SDC25YLL016W TY1A-PR1P0CX58 440 aa3.1□□□□□ -1.91
SDC25YLL016W TY1A-ORP0CX59 440 aa3.1□□□□□ -1.91
SDC25YLL016W TY1A-PR2P0CX60 440 aa3.1□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms