RNA–Protein interactions for RNA: YKR065C

PAM17, Transcript of Constituent of the TIM23 complex, yeast

Gene PAM17, Length 594 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAM17	YKR065C	IRC20	Q06554	1556 aa		10.68	□□□□□ -0.7
PAM17	YKR065C	NUP157	P40064	1391 aa	Known RBP	10.67	□□□□□ -0.7
PAM17	YKR065C	TY1A-DR2	Q03964	440 aa	Known RBP	10.67	□□□□□ -0.7
PAM17	YKR065C	PUN1	Q06991	263 aa		10.67	□□□□□ -0.7
PAM17	YKR065C	SUB2	Q07478	446 aa	Known RBP	10.67	□□□□□ -0.7
PAM17	YKR065C	SRS2	P12954	1174 aa		10.66	□□□□□ -0.7
PAM17	YKR065C	HEH2	Q03281	663 aa		10.66	□□□□□ -0.7
PAM17	YKR065C	BUD3	P25558	1636 aa		10.66	□□□□□ -0.7
PAM17	YKR065C	MSC7	P38694	644 aa		10.65	□□□□□ -0.7
PAM17	YKR065C	NSG2	P53898	299 aa		10.65	□□□□□ -0.7
PAM17	YKR065C	NUP170	P38181	1502 aa		10.64	□□□□□ -0.71
PAM17	YKR065C	RPC31	P17890	251 aa		10.64	□□□□□ -0.71
PAM17	YKR065C	MRPL33	P20084	86 aa		10.64	□□□□□ -0.71
PAM17	YKR065C	KNS1	P32350	737 aa	Predicted RBP	10.64	□□□□□ -0.71
PAM17	YKR065C	YBR197C	P38306	217 aa		10.64	□□□□□ -0.71
PAM17	YKR065C	QDR2	P40474	542 aa		10.64	□□□□□ -0.71
PAM17	YKR065C	FOX2	Q02207	900 aa	Known RBP	10.64	□□□□□ -0.71
PAM17	YKR065C	CUS1	Q02554	436 aa	Predicted RBP	10.64	□□□□□ -0.71
PAM17	YKR065C	CWC15	Q03772	175 aa	Known RBP	10.64	□□□□□ -0.71
PAM17	YKR065C	GDB1	Q06625	1536 aa		10.63	□□□□□ -0.71
PAM17	YKR065C	IQG1	Q12280	1495 aa		10.63	□□□□□ -0.71
PAM17	YKR065C	NCL1	P38205	684 aa	Known RBP	10.63	□□□□□ -0.71
PAM17	YKR065C	YFL066C	P43538	392 aa		10.63	□□□□□ -0.71
PAM17	YKR065C	THI72	Q08579	599 aa		10.63	□□□□□ -0.71
PAM17	YKR065C	PUS1	Q12211	544 aa	Known RBP	10.63	□□□□□ -0.71
PAM17	YKR065C	SPO14	P36126	1683 aa		10.63	□□□□□ -0.71
PAM17	YKR065C	PDC5	P16467	563 aa	Known RBP	10.61	□□□□□ -0.71
PAM17	YKR065C	MDJ1	P35191	511 aa		10.61	□□□□□ -0.71
PAM17	YKR065C	BNI1	P41832	1953 aa		10.61	□□□□□ -0.71
PAM17	YKR065C	VMA3	P25515	160 aa		10.6	□□□□□ -0.71
PAM17	YKR065C	DYS1	P38791	387 aa		10.6	□□□□□ -0.71
PAM17	YKR065C	MTC5	Q03897	1148 aa		10.6	□□□□□ -0.71
PAM17	YKR065C	PDR10	P51533	1564 aa		10.6	□□□□□ -0.71
PAM17	YKR065C	TRM3	Q07527	1436 aa		10.59	□□□□□ -0.71
PAM17	YKR065C	APM2	P38700	605 aa		10.59	□□□□□ -0.71
PAM17	YKR065C	ISC10	P32645	267 aa		10.58	□□□□□ -0.72
PAM17	YKR065C	MMS1	Q06211	1407 aa		10.58	□□□□□ -0.72
PAM17	YKR065C	MET1	P36150	593 aa		10.56	□□□□□ -0.72
PAM17	YKR065C	LDH1	P38139	375 aa		10.56	□□□□□ -0.72
PAM17	YKR065C	PNP1	Q05788	311 aa		10.56	□□□□□ -0.72
PAM17	YKR065C	YOR296W	Q08748	1289 aa		10.55	□□□□□ -0.72
PAM17	YKR065C	IKI3	Q06706	1349 aa	Known RBP	10.55	□□□□□ -0.72
PAM17	YKR065C	SBE2	P42223	864 aa	Known RBP	10.54	□□□□□ -0.72
PAM17	YKR065C	YNR014W	P53719	212 aa		10.54	□□□□□ -0.72
PAM17	YKR065C	RRN6	P32786	894 aa		10.53	□□□□□ -0.72
PAM17	YKR065C	PRK1	P40494	810 aa		10.52	□□□□□ -0.73
PAM17	YKR065C	YNR040W	P53736	256 aa		10.52	□□□□□ -0.73
PAM17	YKR065C	GIP1	P38229	639 aa		10.51	□□□□□ -0.73
PAM17	YKR065C	TDA6	Q06466	467 aa		10.51	□□□□□ -0.73
PAM17	YKR065C	TY3B-G	Q99315	1547 aa		10.51	□□□□□ -0.73
PAM17	YKR065C	TPS3	P38426	1054 aa	Known RBP	10.5	□□□□□ -0.73
PAM17	YKR065C	BOI2	P39969	1040 aa		10.5	□□□□□ -0.73
PAM17	YKR065C	YPR053C	Q6Q5F3	151 aa		10.5	□□□□□ -0.73
PAM17	YKR065C	MCX1	P38323	520 aa	Predicted RBP	10.49	□□□□□ -0.73
PAM17	YKR065C	SRB8	P25648	1427 aa		10.49	□□□□□ -0.73
PAM17	YKR065C	ISW1	P38144	1129 aa		10.48	□□□□□ -0.73
PAM17	YKR065C	YER156C	P40093	338 aa	Known RBP	10.48	□□□□□ -0.73
PAM17	YKR065C	ITC1	P53125	1264 aa		10.48	□□□□□ -0.73
PAM17	YKR065C	RPL34A	P87262	121 aa	Predicted RBP	10.48	□□□□□ -0.73
PAM17	YKR065C	YBT1	P32386	1661 aa		10.47	□□□□□ -0.73
PAM17	YKR065C	DOP1	Q03921	1698 aa		10.47	□□□□□ -0.73
PAM17	YKR065C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	10.46	□□□□□ -0.73	not detected
PAM17	YKR065C	BSD2	P38356	321 aa		10.46	□□□□□ -0.73
PAM17	YKR065C	APC11	Q12157	165 aa		10.46	□□□□□ -0.73
PAM17	YKR065C	ARO1	P08566	1588 aa	Known RBP	10.45	□□□□□ -0.74
PAM17	YKR065C	YSP2	Q06681	1438 aa		10.45	□□□□□ -0.74
PAM17	YKR065C	SSA1	P10591	642 aa	Known RBP	10.45	□□□□□ -0.74
PAM17	YKR065C	YBR287W	P38355	427 aa		10.45	□□□□□ -0.74
PAM17	YKR065C	LSO1	Q3E827	93 aa		10.45	□□□□□ -0.74
PAM17	YKR065C	BNR1	P40450	1375 aa		10.44	□□□□□ -0.74
PAM17	YKR065C	FUR4	P05316	633 aa	Known RBP	10.44	□□□□□ -0.74
PAM17	YKR065C	IDI1	P15496	288 aa		10.44	□□□□□ -0.74
PAM17	YKR065C	MSN1	P22148	382 aa		10.44	□□□□□ -0.74
PAM17	YKR065C	YMR187C	Q03236	431 aa		10.44	□□□□□ -0.74
PAM17	YKR065C	HXT8	P40886	569 aa		10.43	□□□□□ -0.74
PAM17	YKR065C	SEC7	P11075	2009 aa	Known RBP	10.43	□□□□□ -0.74
PAM17	YKR065C	ALG14	P38242	237 aa		10.41	□□□□□ -0.74
PAM17	YKR065C	SKN7	P38889	622 aa		10.41	□□□□□ -0.74
PAM17	YKR065C	FIR1	P40020	876 aa		10.41	□□□□□ -0.74
PAM17	YKR065C	LSB3	P43603	459 aa	Known RBP	10.41	□□□□□ -0.74
PAM17	YKR065C	RSC2	Q06488	889 aa		10.41	□□□□□ -0.74
PAM17	YKR065C	URN1	Q06525	465 aa	Known RBP	10.41	□□□□□ -0.74
PAM17	YKR065C	BUD21	Q08492	214 aa	Predicted RBP	10.41	□□□□□ -0.74
PAM17	YKR065C	NHA1	Q99271	985 aa		10.41	□□□□□ -0.74
PAM17	YKR065C	BOI1	P38041	980 aa	Known RBP	10.4	□□□□□ -0.74
PAM17	YKR065C	PGM2	P37012	569 aa	Known RBP	10.39	□□□□□ -0.75
PAM17	YKR065C	GIS4	Q04233	774 aa		10.39	□□□□□ -0.75
PAM17	YKR065C	NAR1	P23503	491 aa	Known RBP	10.38	□□□□□ -0.75
PAM17	YKR065C	BOL3	P39724	118 aa		10.38	□□□□□ -0.75
PAM17	YKR065C	YIL165C	P40446	119 aa		10.38	□□□□□ -0.75
PAM17	YKR065C	KTR2	P33550	425 aa		10.36	□□□□□ -0.75
PAM17	YKR065C	CCT8	P47079	568 aa	Known RBP	10.36	□□□□□ -0.75
PAM17	YKR065C	SUT1	P53032	299 aa	Known RBP	10.36	□□□□□ -0.75
PAM17	YKR065C	DNF2	Q12675	1612 aa		10.36	□□□□□ -0.75
PAM17	YKR065C	YDR215C	Q12240	137 aa		10.35	□□□□□ -0.75
PAM17	YKR065C	NTA1	P40354	457 aa		10.34	□□□□□ -0.75
PAM17	YKR065C	SLP1	Q12232	587 aa		10.34	□□□□□ -0.75
PAM17	YKR065C	CHC1	P22137	1653 aa	Known RBP	10.34	□□□□□ -0.75
PAM17	YKR065C	MRP10	O75012	95 aa		10.33	□□□□□ -0.76
PAM17	YKR065C	RPB10	P22139	70 aa		10.33	□□□□□ -0.76

Retrieved 100 of 5,963 RNA–protein pairs in 8.7 ms