RNA–Protein interactions for RNA: YKL172W

EBP2, Transcript of Required for 25S rRNA maturation and 60S ribosomal subunit assembly, yeast

Gene EBP2, Length 1,284 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EBP2	YKL172W	PDC5	P16467	563 aa	Known RBP	6.73	□□□□□ -1.33
EBP2	YKL172W	PYC2	P32327	1180 aa	Known RBP	6.73	□□□□□ -1.33
EBP2	YKL172W	DAK2	P43550	591 aa		6.73	□□□□□ -1.33
EBP2	YKL172W	SNU71	P53207	620 aa	Known RBP	6.73	□□□□□ -1.33
EBP2	YKL172W	MSH6	Q03834	1242 aa		6.73	□□□□□ -1.33
EBP2	YKL172W	RPT1	P33299	467 aa	Known RBP	6.72	□□□□□ -1.33
EBP2	YKL172W	YPL062W	Q02781	134 aa		6.72	□□□□□ -1.33
EBP2	YKL172W	ATE1	P16639	503 aa		6.71	□□□□□ -1.34
EBP2	YKL172W	INP51	P40559	946 aa	Known RBP	6.71	□□□□□ -1.34
EBP2	YKL172W	YJR107W	P47145	328 aa		6.71	□□□□□ -1.34
EBP2	YKL172W	CTR9	P89105	1077 aa		6.71	□□□□□ -1.34
EBP2	YKL172W	YJL181W	P46987	611 aa		6.7	□□□□□ -1.34
EBP2	YKL172W	ALD3	P54114	506 aa		6.7	□□□□□ -1.34
EBP2	YKL172W	YCS4	Q06156	1176 aa		6.7	□□□□□ -1.34
EBP2	YKL172W	KAR2	P16474	682 aa	Known RBP	6.69	□□□□□ -1.34
EBP2	YKL172W	LEM3	P42838	414 aa		6.69	□□□□□ -1.34
EBP2	YKL172W	PMT7	Q06644	662 aa		6.69	□□□□□ -1.34
EBP2	YKL172W	SLP1	Q12232	587 aa		6.69	□□□□□ -1.34
EBP2	YKL172W	COB	P00163	385 aa		6.68	□□□□□ -1.34
EBP2	YKL172W	MET1	P36150	593 aa		6.68	□□□□□ -1.34
EBP2	YKL172W	BIO5	P53744	561 aa	Known RBP	6.68	□□□□□ -1.34
EBP2	YKL172W	SOG2	Q08817	791 aa		6.68	□□□□□ -1.34
EBP2	YKL172W	TRK2	P28584	889 aa		6.67	□□□□□ -1.34
EBP2	YKL172W	RVS167	P39743	482 aa	Known RBP	6.67	□□□□□ -1.34
EBP2	YKL172W	NUT1	P53114	1132 aa		6.67	□□□□□ -1.34
EBP2	YKL172W	GUP1	P53154	560 aa		6.67	□□□□□ -1.34
EBP2	YKL172W	GLO4	Q12320	285 aa		6.67	□□□□□ -1.34
EBP2	YKL172W	PRP40	P33203	583 aa	Known RBP	6.66	□□□□□ -1.34
EBP2	YKL172W	SAP155	P43612	1002 aa		6.66	□□□□□ -1.34
EBP2	YKL172W	YGR122W	P53272	402 aa		6.66	□□□□□ -1.34
EBP2	YKL172W	AI1	P03875	834 aa		6.65	□□□□□ -1.34
EBP2	YKL172W	RIM11	P38615	370 aa		6.65	□□□□□ -1.34
EBP2	YKL172W	FET4	P40988	552 aa		6.65	□□□□□ -1.34
EBP2	YKL172W	GIS4	Q04233	774 aa		6.65	□□□□□ -1.34
EBP2	YKL172W	SVF1	Q05515	481 aa		6.65	□□□□□ -1.34
EBP2	YKL172W	MRP10	O75012	95 aa		6.64	□□□□□ -1.35
EBP2	YKL172W	HVG1	P0CE11	249 aa		6.64	□□□□□ -1.35
EBP2	YKL172W	NAR1	P23503	491 aa	Known RBP	6.64	□□□□□ -1.35
EBP2	YKL172W	NAP1	P25293	417 aa	Known RBP	6.64	□□□□□ -1.35
EBP2	YKL172W	SEC8	P32855	1065 aa		6.64	□□□□□ -1.35
EBP2	YKL172W	TFA2	P36145	328 aa		6.64	□□□□□ -1.35
EBP2	YKL172W	ALG14	P38242	237 aa		6.64	□□□□□ -1.35
EBP2	YKL172W	YJR124C	P47159	448 aa		6.64	□□□□□ -1.35
EBP2	YKL172W	RMD1	Q03441	430 aa		6.64	□□□□□ -1.35
EBP2	YKL172W	OYE2	Q03558	400 aa	Known RBP	6.64	□□□□□ -1.35
EBP2	YKL172W	DAL4	Q04895	635 aa		6.64	□□□□□ -1.35
EBP2	YKL172W	CMR1	Q12510	522 aa	Known RBP	6.64	□□□□□ -1.35
EBP2	YKL172W	NHA1	Q99271	985 aa		6.64	□□□□□ -1.35
EBP2	YKL172W	PRP5	P21372	849 aa	Predicted RBP	6.63	□□□□□ -1.35
EBP2	YKL172W	NPR1	P22211	790 aa		6.63	□□□□□ -1.35
EBP2	YKL172W	PGM2	P37012	569 aa	Known RBP	6.63	□□□□□ -1.35
EBP2	YKL172W	AMN1	P38285	549 aa	Predicted RBP	6.63	□□□□□ -1.35
EBP2	YKL172W	SHU2	P38957	223 aa		6.63	□□□□□ -1.35
EBP2	YKL172W	MON1	P53129	644 aa		6.63	□□□□□ -1.35
EBP2	YKL172W	NOP7	P53261	605 aa	Known RBP	6.63	□□□□□ -1.35
EBP2	YKL172W	YAF9	P53930	226 aa		6.63	□□□□□ -1.35
EBP2	YKL172W	HXK1	P04806	485 aa	Known RBP	6.62	□□□□□ -1.35
EBP2	YKL172W	MCM5	P29496	775 aa	Known RBP	6.62	□□□□□ -1.35
EBP2	YKL172W	YNR065C	P53751	1116 aa		6.62	□□□□□ -1.35
EBP2	YKL172W	MCD1	Q12158	566 aa		6.62	□□□□□ -1.35
EBP2	YKL172W	DUR3	P33413	735 aa		6.61	□□□□□ -1.35
EBP2	YKL172W	GIP2	P40036	548 aa		6.61	□□□□□ -1.35
EBP2	YKL172W	FYV10	P40492	516 aa		6.61	□□□□□ -1.35
EBP2	YKL172W	NEO1	P40527	1151 aa		6.61	□□□□□ -1.35
EBP2	YKL172W	LSB6	P42951	607 aa		6.61	□□□□□ -1.35
EBP2	YKL172W	SOK2	P53438	785 aa	Predicted RBP	6.61	□□□□□ -1.35
EBP2	YKL172W	YNR014W	P53719	212 aa		6.61	□□□□□ -1.35
EBP2	YKL172W	ESF1	Q06344	628 aa	Known RBP	6.61	□□□□□ -1.35
EBP2	YKL172W	FAA3	P39002	694 aa		6.6	□□□□□ -1.35
EBP2	YKL172W	SPO71	Q03868	1245 aa		6.6	□□□□□ -1.35
EBP2	YKL172W	CYC8	P14922	966 aa		6.59	□□□□□ -1.35
EBP2	YKL172W	SAC7	P17121	654 aa		6.59	□□□□□ -1.35
EBP2	YKL172W	SQT1	P35184	431 aa		6.59	□□□□□ -1.35
EBP2	YKL172W	RPS26A	P39938	119 aa	Known RBP	6.59	□□□□□ -1.35
EBP2	YKL172W	RPS26B	P39939	119 aa	Known RBP	6.59	□□□□□ -1.35
EBP2	YKL172W	BOI2	P39969	1040 aa		6.59	□□□□□ -1.35
EBP2	YKL172W	MRPS18	P42847	217 aa		6.59	□□□□□ -1.35
EBP2	YKL172W	ULP1	Q02724	621 aa		6.59	□□□□□ -1.35
EBP2	YKL172W	YPL109C	Q02981	657 aa		6.59	□□□□□ -1.35
EBP2	YKL172W	ADI1	Q03677	179 aa		6.59	□□□□□ -1.35
EBP2	YKL172W	RAD2	P07276	1031 aa		6.58	□□□□□ -1.36
EBP2	YKL172W	RSM26	P47141	266 aa		6.58	□□□□□ -1.36
EBP2	YKL172W	HAS1	Q03532	505 aa	Known RBP	6.58	□□□□□ -1.36
EBP2	YKL172W	SPR28	Q04921	423 aa		6.58	□□□□□ -1.36
EBP2	YKL172W	HTS1	P07263	546 aa	Known RBP	6.57	□□□□□ -1.36
EBP2	YKL172W	PRE9	P23638	258 aa	Known RBP	6.57	□□□□□ -1.36
EBP2	YKL172W	MCM2	P29469	868 aa		6.57	□□□□□ -1.36
EBP2	YKL172W	PAN5	P38787	379 aa		6.57	□□□□□ -1.36
EBP2	YKL172W	TED1	P40533	473 aa		6.57	□□□□□ -1.36
EBP2	YKL172W	TOS4	Q06266	489 aa		6.57	□□□□□ -1.36
EBP2	YKL172W	YIG1	Q08956	461 aa		6.57	□□□□□ -1.36
EBP2	YKL172W	YKL077W	P36081	392 aa		6.56	□□□□□ -1.36
EBP2	YKL172W	PAM1	P37304	830 aa	Known RBP	6.56	□□□□□ -1.36
EBP2	YKL172W	DSE4	P53753	1117 aa		6.56	□□□□□ -1.36
EBP2	YKL172W	NOG1	Q02892	647 aa	Known RBP	6.56	□□□□□ -1.36
EBP2	YKL172W	YLL054C	Q12244	843 aa		6.56	□□□□□ -1.36
EBP2	YKL172W	TY4B-P	A0A0B7P3V8	1104 aa		6.55	□□□□□ -1.36
EBP2	YKL172W	PEP7	P32609	515 aa		6.55	□□□□□ -1.36
EBP2	YKL172W	UGA4	P32837	571 aa		6.55	□□□□□ -1.36
EBP2	YKL172W	GCV1	P48015	400 aa		6.55	□□□□□ -1.36

Retrieved 100 of 5,963 RNA–protein pairs in 32 ms