RNA–Protein interactions for RNA: YJR044C

VPS55, Transcript of Late endosomal protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS55, Length 423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS55YJR044C ALD4P46367 519 aaKnown RBP3.57□□□□□ -1.84
VPS55YJR044C NCE103P53615 221 aa3.57□□□□□ -1.84
VPS55YJR044C ALD3P54114 506 aa3.57□□□□□ -1.84
VPS55YJR044C GCD1P09032 578 aaPredicted RBP3.56□□□□□ -1.84
VPS55YJR044C ERS1P17261 260 aa3.56□□□□□ -1.84
VPS55YJR044C MSB1P21339 1137 aaKnown RBP3.56□□□□□ -1.84
VPS55YJR044C MAE1P36013 669 aaKnown RBP3.56□□□□□ -1.84
VPS55YJR044C HGH1P48362 394 aaKnown RBP3.56□□□□□ -1.84
VPS55YJR044C BIO5P53744 561 aaKnown RBP3.56□□□□□ -1.84
VPS55YJR044C TTI1P36097 1038 aa3.55□□□□□ -1.84
VPS55YJR044C POL12P38121 705 aaPredicted RBP3.55□□□□□ -1.84
VPS55YJR044C GUP1P53154 560 aa3.55□□□□□ -1.84
VPS55YJR044C SOG2Q08817 791 aa3.55□□□□□ -1.84
VPS55YJR044C NEO1P40527 1151 aa3.54□□□□□ -1.84
VPS55YJR044C KIP3P53086 805 aaKnown RBP3.54□□□□□ -1.84
VPS55YJR044C ELG1Q12050 791 aa3.54□□□□□ -1.84
VPS55YJR044C PUN1Q06991 263 aa3.53□□□□□ -1.84
VPS55YJR044C FUS1P11710 512 aa3.52□□□□□ -1.85
VPS55YJR044C CPS1P27614 576 aa3.52□□□□□ -1.85
VPS55YJR044C AIM46P38885 310 aa3.52□□□□□ -1.85
VPS55YJR044C SPO71Q03868 1245 aa3.52□□□□□ -1.85
VPS55YJR044C GIC2Q06648 383 aa3.52□□□□□ -1.85
VPS55YJR044C GAS1P22146 559 aaKnown RBP3.51□□□□□ -1.85
VPS55YJR044C KTR2P33550 425 aa3.51□□□□□ -1.85
VPS55YJR044C YKL222CP35995 705 aa3.51□□□□□ -1.85
VPS55YJR044C BOI1P38041 980 aaKnown RBP3.51□□□□□ -1.85
VPS55YJR044C FIR1P40020 876 aa3.51□□□□□ -1.85
VPS55YJR044C LEM3P42838 414 aa3.51□□□□□ -1.85
VPS55YJR044C RGD2P43556 714 aa3.51□□□□□ -1.85
VPS55YJR044C YJR124CP47159 448 aa3.51□□□□□ -1.85
VPS55YJR044C YNR065CP53751 1116 aa3.51□□□□□ -1.85
VPS55YJR044C HAS1Q03532 505 aaKnown RBP3.51□□□□□ -1.85
VPS55YJR044C DFG16Q99234 619 aa3.51□□□□□ -1.85
VPS55YJR044C WHI3P34761 661 aaKnown RBP3.5□□□□□ -1.85
VPS55YJR044C HXT8P40886 569 aa3.5□□□□□ -1.85
VPS55YJR044C SUT1P53032 299 aaKnown RBP3.5□□□□□ -1.85
VPS55YJR044C PUP1P25043 261 aa3.49□□□□□ -1.85
VPS55YJR044C YCR015CP25616 317 aa3.49□□□□□ -1.85
VPS55YJR044C YHL008CP38750 627 aa3.48□□□□□ -1.85
VPS55YJR044C NIT1P40447 199 aa3.48□□□□□ -1.85
VPS55YJR044C TAF1P46677 1066 aa3.48□□□□□ -1.85
VPS55YJR044C ECL1P48235 211 aa3.48□□□□□ -1.85
VPS55YJR044C YMR074CQ04773 145 aa3.48□□□□□ -1.85
VPS55YJR044C GLO4Q12320 285 aa3.48□□□□□ -1.85
VPS55YJR044C TIF6Q12522 245 aaKnown RBP3.48□□□□□ -1.85
VPS55YJR044C RPB10P22139 70 aa3.47□□□□□ -1.85
VPS55YJR044C GPT2P36148 743 aa3.47□□□□□ -1.85
VPS55YJR044C MMM1P41800 426 aa3.47□□□□□ -1.85
VPS55YJR044C YML083CQ04526 418 aa3.47□□□□□ -1.85
VPS55YJR044C ESC8Q08119 714 aa3.47□□□□□ -1.85
VPS55YJR044C HVG1P0CE11 249 aa3.46□□□□□ -1.86
VPS55YJR044C SRS2P12954 1174 aa3.46□□□□□ -1.86
VPS55YJR044C YBR287WP38355 427 aa3.46□□□□□ -1.86
VPS55YJR044C PRP43P53131 767 aaKnown RBP3.46□□□□□ -1.86
VPS55YJR044C PUF6Q04373 656 aaKnown RBP3.46□□□□□ -1.86
VPS55YJR044C CDA2Q06703 312 aa3.46□□□□□ -1.86
VPS55YJR044C PYC2P32327 1180 aaKnown RBP3.45□□□□□ -1.86
VPS55YJR044C HSP78P33416 811 aa3.45□□□□□ -1.86
VPS55YJR044C RAD55P38953 406 aa3.45□□□□□ -1.86
VPS55YJR044C NTA1P40354 457 aa3.45□□□□□ -1.86
VPS55YJR044C FET4P40988 552 aa3.45□□□□□ -1.86
VPS55YJR044C CIT3P43635 486 aa3.45□□□□□ -1.86
VPS55YJR044C YOR223WQ12015 292 aa3.45□□□□□ -1.86
VPS55YJR044C PSY2P40164 858 aa3.44□□□□□ -1.86
VPS55YJR044C FAR11P53917 953 aa3.44□□□□□ -1.86
VPS55YJR044C RCM1P53972 490 aa3.44□□□□□ -1.86
VPS55YJR044C TSA1P34760 196 aaKnown RBP3.43□□□□□ -1.86
VPS55YJR044C GIP4P39732 760 aa3.43□□□□□ -1.86
VPS55YJR044C CWC15Q03772 175 aaKnown RBP3.43□□□□□ -1.86
VPS55YJR044C DOT1Q04089 582 aaKnown RBP3.43□□□□□ -1.86
VPS55YJR044C APC11Q12157 165 aa3.43□□□□□ -1.86
VPS55YJR044C NSI1Q12457 570 aa3.43□□□□□ -1.86
VPS55YJR044C IRS4P36115 615 aaKnown RBP3.42□□□□□ -1.86
VPS55YJR044C OYE3P41816 400 aaPredicted RBP3.42□□□□□ -1.86
VPS55YJR044C PNP1Q05788 311 aa3.42□□□□□ -1.86
VPS55YJR044C THI80P35202 319 aa3.41□□□□□ -1.86
VPS55YJR044C EAR1Q03212 550 aa3.41□□□□□ -1.86
VPS55YJR044C RRN6P32786 894 aa3.4□□□□□ -1.87
VPS55YJR044C ALG6Q12001 544 aaKnown RBP3.4□□□□□ -1.87
VPS55YJR044C RPS4AP0CX35 261 aaKnown RBP3.39□□□□□ -1.87
VPS55YJR044C RPS4BP0CX36 261 aaKnown RBP3.39□□□□□ -1.87
VPS55YJR044C CTR9P89105 1077 aa3.39□□□□□ -1.87
VPS55YJR044C SSY1Q03770 852 aa3.39□□□□□ -1.87
VPS55YJR044C NOB1Q08444 459 aaKnown RBP3.39□□□□□ -1.87
VPS55YJR044C COBP00163 385 aa3.38□□□□□ -1.87
VPS55YJR044C ADP1P25371 1049 aa3.38□□□□□ -1.87
VPS55YJR044C SMC1P32908 1225 aa3.38□□□□□ -1.87
VPS55YJR044C FLR1P38124 548 aa3.38□□□□□ -1.87
VPS55YJR044C YOR059CQ08448 450 aaKnown RBP3.38□□□□□ -1.87
VPS55YJR044C MSH4P40965 878 aaPredicted RBP3.37□□□□□ -1.87
VPS55YJR044C LSO1Q3E827 93 aa3.37□□□□□ -1.87
VPS55YJR044C PRO1P32264 428 aa3.36□□□□□ -1.87
VPS55YJR044C DUR3P33413 735 aa3.36□□□□□ -1.87
VPS55YJR044C AIM3P38266 947 aaKnown RBP3.36□□□□□ -1.87
VPS55YJR044C BOL3P39724 118 aa3.36□□□□□ -1.87
VPS55YJR044C GCV1P48015 400 aa3.36□□□□□ -1.87
VPS55YJR044C DMA2P53924 522 aa3.36□□□□□ -1.87
VPS55YJR044C MSH6Q03834 1242 aa3.36□□□□□ -1.87
VPS55YJR044C TRE1Q08919 783 aa3.36□□□□□ -1.87
VPS55YJR044C YIG1Q08956 461 aa3.36□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms