RNA–Protein interactions for RNA: YGR136W

LSB1, Transcript of Negative regulator of actin nucleation-promoting factor activity, yeast

Gene LSB1, Length 726 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSB1	YGR136W	YNR029C	P53729	429 aa	Known RBP	5.52	□□□□□ -1.53
LSB1	YGR136W	NOB1	Q08444	459 aa	Known RBP	5.52	□□□□□ -1.53
LSB1	YGR136W	RAD9	P14737	1309 aa		5.51	□□□□□ -1.53
LSB1	YGR136W	GPM1	P00950	247 aa	Known RBP	5.51	□□□□□ -1.53
LSB1	YGR136W	NAP1	P25293	417 aa	Known RBP	5.51	□□□□□ -1.53
LSB1	YGR136W	SPT2	P06843	333 aa	Predicted RBP	5.5	□□□□□ -1.53
LSB1	YGR136W	PUP1	P25043	261 aa		5.5	□□□□□ -1.53
LSB1	YGR136W	YDJ1	P25491	409 aa	Known RBP	5.5	□□□□□ -1.53
LSB1	YGR136W	ESL2	P36168	1195 aa		5.5	□□□□□ -1.53
LSB1	YGR136W	AHP1	P38013	176 aa	Known RBP	5.5	□□□□□ -1.53
LSB1	YGR136W	TAF5	P38129	798 aa		5.5	□□□□□ -1.53
LSB1	YGR136W	ATG3	P40344	310 aa		5.5	□□□□□ -1.53
LSB1	YGR136W	CFT1	Q06632	1357 aa	Known RBP	5.5	□□□□□ -1.53
LSB1	YGR136W	BCK1	Q01389	1478 aa		5.5	□□□□□ -1.53
LSB1	YGR136W	PEP12	P32854	288 aa		5.49	□□□□□ -1.53
LSB1	YGR136W	BOI2	P39969	1040 aa		5.49	□□□□□ -1.53
LSB1	YGR136W	YDR215C	Q12240	137 aa		5.49	□□□□□ -1.53
LSB1	YGR136W	MCM16	Q12262	181 aa		5.49	□□□□□ -1.53
LSB1	YGR136W	SEC3	P33332	1336 aa	Known RBP	5.48	□□□□□ -1.53
LSB1	YGR136W	DAT1	P13483	248 aa	Known RBP	5.48	□□□□□ -1.53
LSB1	YGR136W	TGL4	P36165	910 aa		5.48	□□□□□ -1.53
LSB1	YGR136W	AMN1	P38285	549 aa	Predicted RBP	5.48	□□□□□ -1.53
LSB1	YGR136W	SSF1	P38789	453 aa	Predicted RBP	5.48	□□□□□ -1.53
LSB1	YGR136W	TY3B-I	Q7LHG5	1498 aa	Known RBP	5.47	□□□□□ -1.53
LSB1	YGR136W	FPS1	P23900	669 aa		5.47	□□□□□ -1.53
LSB1	YGR136W	UTR2	P32623	467 aa		5.47	□□□□□ -1.53
LSB1	YGR136W	TAF8	Q03750	510 aa		5.47	□□□□□ -1.53
LSB1	YGR136W	MET1	P36150	593 aa		5.46	□□□□□ -1.54
LSB1	YGR136W	SLN1	P39928	1220 aa	Predicted RBP	5.46	□□□□□ -1.54
LSB1	YGR136W	LSB6	P42951	607 aa		5.46	□□□□□ -1.54
LSB1	YGR136W	ISR1	Q06098	443 aa	Known RBP	5.46	□□□□□ -1.54
LSB1	YGR136W	MHP1	P43638	1398 aa		5.45	□□□□□ -1.54
LSB1	YGR136W	SCT1	P32784	759 aa		5.45	□□□□□ -1.54
LSB1	YGR136W	CAB3	P36076	571 aa		5.45	□□□□□ -1.54
LSB1	YGR136W	APL6	P46682	809 aa		5.45	□□□□□ -1.54
LSB1	YGR136W	UTP13	Q05946	817 aa	Known RBP	5.45	□□□□□ -1.54
LSB1	YGR136W	NUP192	P47054	1683 aa		5.44	□□□□□ -1.54
LSB1	YGR136W	HEM3	P28789	327 aa		5.44	□□□□□ -1.54
LSB1	YGR136W	TBS1	P38114	1094 aa		5.44	□□□□□ -1.54
LSB1	YGR136W	ORC1	P54784	914 aa	Predicted RBP	5.44	□□□□□ -1.54
LSB1	YGR136W	GAL2	P13181	574 aa		5.43	□□□□□ -1.54
LSB1	YGR136W	IRE1	P32361	1115 aa		5.43	□□□□□ -1.54
LSB1	YGR136W	EBP2	P36049	427 aa	Known RBP	5.43	□□□□□ -1.54
LSB1	YGR136W	SUM1	P46676	1062 aa		5.43	□□□□□ -1.54
LSB1	YGR136W	RCM1	P53972	490 aa		5.43	□□□□□ -1.54
LSB1	YGR136W	MCA1	Q08601	432 aa		5.43	□□□□□ -1.54
LSB1	YGR136W	AIM44	Q99299	758 aa		5.43	□□□□□ -1.54
LSB1	YGR136W	YLR419W	Q06698	1435 aa	Known RBP	5.42	□□□□□ -1.54
LSB1	YGR136W	RDS2	P19541	446 aa	Known RBP	5.42	□□□□□ -1.54
LSB1	YGR136W	KNS1	P32350	737 aa	Predicted RBP	5.42	□□□□□ -1.54
LSB1	YGR136W	ASF1	P32447	279 aa		5.42	□□□□□ -1.54
LSB1	YGR136W	TAT1	P38085	619 aa		5.42	□□□□□ -1.54
LSB1	YGR136W	STM1	P39015	273 aa	Known RBP	5.42	□□□□□ -1.54
LSB1	YGR136W	UTP7	P40055	554 aa	Known RBP	5.42	□□□□□ -1.54
LSB1	YGR136W	ALA1	P40825	983 aa	Known RBP	5.42	□□□□□ -1.54
LSB1	YGR136W	JJJ2	P46997	583 aa		5.42	□□□□□ -1.54
LSB1	YGR136W	KIP3	P53086	805 aa	Known RBP	5.42	□□□□□ -1.54
LSB1	YGR136W	SNU71	P53207	620 aa	Known RBP	5.42	□□□□□ -1.54
LSB1	YGR136W	PUF6	Q04373	656 aa	Known RBP	5.42	□□□□□ -1.54
LSB1	YGR136W	YML083C	Q04526	418 aa		5.42	□□□□□ -1.54
LSB1	YGR136W	ENT1	Q12518	454 aa		5.42	□□□□□ -1.54
LSB1	YGR136W	GLT1	Q12680	2145 aa	Known RBP	5.41	□□□□□ -1.54
LSB1	YGR136W	SPE2	P21182	396 aa		5.41	□□□□□ -1.54
LSB1	YGR136W	EMP47	P43555	445 aa		5.41	□□□□□ -1.54
LSB1	YGR136W	HAP4	P14064	554 aa		5.4	□□□□□ -1.54
LSB1	YGR136W	PDC5	P16467	563 aa	Known RBP	5.4	□□□□□ -1.54
LSB1	YGR136W	SEC20	P28791	383 aa		5.4	□□□□□ -1.54
LSB1	YGR136W	PPH3	P32345	308 aa		5.4	□□□□□ -1.54
LSB1	YGR136W	MRPL16	P38064	232 aa		5.4	□□□□□ -1.54
LSB1	YGR136W	SEN54	Q02825	467 aa	Predicted RBP	5.4	□□□□□ -1.54
LSB1	YGR136W	HAT1	Q12341	374 aa		5.4	□□□□□ -1.54
LSB1	YGR136W	PHO87	P25360	923 aa		5.39	□□□□□ -1.55
LSB1	YGR136W	PRP45	P28004	379 aa	Predicted RBP	5.39	□□□□□ -1.55
LSB1	YGR136W	MAC1	P35192	417 aa		5.39	□□□□□ -1.55
LSB1	YGR136W	SHM1	P37292	490 aa	Predicted RBP	5.39	□□□□□ -1.55
LSB1	YGR136W	ENP1	P38333	483 aa	Known RBP	5.39	□□□□□ -1.55
LSB1	YGR136W	CHZ1	P40019	153 aa	Predicted RBP	5.39	□□□□□ -1.55
LSB1	YGR136W	ECM23	Q02710	187 aa		5.39	□□□□□ -1.55
LSB1	YGR136W	HAL5	P38970	855 aa	Known RBP	5.38	□□□□□ -1.55
LSB1	YGR136W	PSH1	Q12161	406 aa		5.38	□□□□□ -1.55
LSB1	YGR136W	ISF1	P32488	338 aa		5.37	□□□□□ -1.55
LSB1	YGR136W	SPR3	P41901	512 aa		5.37	□□□□□ -1.55
LSB1	YGR136W	TY1A-DR2	Q03964	440 aa	Known RBP	5.37	□□□□□ -1.55
LSB1	YGR136W	GAS4	Q08271	471 aa		5.37	□□□□□ -1.55
LSB1	YGR136W	SPT7	P35177	1332 aa		5.37	□□□□□ -1.55
LSB1	YGR136W	PRP5	P21372	849 aa	Predicted RBP	5.36	□□□□□ -1.55
LSB1	YGR136W	PDC6	P26263	563 aa	Known RBP	5.36	□□□□□ -1.55
LSB1	YGR136W	UBX7	P38349	436 aa		5.36	□□□□□ -1.55
LSB1	YGR136W	YFL034W	P43564	1073 aa		5.36	□□□□□ -1.55
LSB1	YGR136W	YPL034W	Q03083	165 aa		5.36	□□□□□ -1.55
LSB1	YGR136W	CWC15	Q03772	175 aa	Known RBP	5.36	□□□□□ -1.55
LSB1	YGR136W	STB3	Q12427	513 aa		5.36	□□□□□ -1.55
LSB1	YGR136W	KTR7	P40504	517 aa		5.35	□□□□□ -1.55
LSB1	YGR136W	PRY1	P47032	299 aa		5.35	□□□□□ -1.55
LSB1	YGR136W	TSC13	Q99190	310 aa		5.35	□□□□□ -1.55
LSB1	YGR136W	LEU2	P04173	364 aa	Predicted RBP	5.34	□□□□□ -1.55
LSB1	YGR136W	IMH1	Q06704	911 aa	Known RBP	5.34	□□□□□ -1.55
LSB1	YGR136W	YBL113C	Q7M4S9	792 aa		5.34	□□□□□ -1.55
LSB1	YGR136W	RPS31	P05759	152 aa	Known RBP	5.33	□□□□□ -1.56
LSB1	YGR136W	SOH1	P38633	127 aa		5.33	□□□□□ -1.56

Retrieved 100 of 5,963 RNA–protein pairs in 32.7 ms