RNA–Protein interactions for RNA: YGL090W

LIF1, Transcript of Component of the DNA ligase IV complex, yeast

Gene LIF1, Length 1,266 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LIF1	YGL090W	SSA4	P22202	642 aa	Known RBP	4.95	□□□□□ -1.62
LIF1	YGL090W	NAM7	P30771	971 aa	Known RBP	4.95	□□□□□ -1.62
LIF1	YGL090W	BOI1	P38041	980 aa	Known RBP	4.95	□□□□□ -1.62
LIF1	YGL090W	SPO74	P45819	413 aa		4.95	□□□□□ -1.62
LIF1	YGL090W	SUT1	P53032	299 aa	Known RBP	4.95	□□□□□ -1.62
LIF1	YGL090W	KTR2	P33550	425 aa		4.94	□□□□□ -1.62
LIF1	YGL090W	UBP5	P39944	805 aa		4.94	□□□□□ -1.62
LIF1	YGL090W	PNP1	Q05788	311 aa		4.94	□□□□□ -1.62
LIF1	YGL090W	EMG1	Q06287	252 aa	Known RBP	4.94	□□□□□ -1.62
LIF1	YGL090W	RPB10	P22139	70 aa		4.93	□□□□□ -1.62
LIF1	YGL090W	REC8	Q12188	680 aa		4.93	□□□□□ -1.62
LIF1	YGL090W	HXT8	P40886	569 aa		4.92	□□□□□ -1.62
LIF1	YGL090W	RSC2	Q06488	889 aa		4.92	□□□□□ -1.62
LIF1	YGL090W	INP51	P40559	946 aa	Known RBP	4.91	□□□□□ -1.62
LIF1	YGL090W	RGD2	P43556	714 aa		4.91	□□□□□ -1.62
LIF1	YGL090W	TFA2	P36145	328 aa		4.9	□□□□□ -1.63
LIF1	YGL090W	AIM46	P38885	310 aa		4.9	□□□□□ -1.63
LIF1	YGL090W	FIR1	P40020	876 aa		4.9	□□□□□ -1.63
LIF1	YGL090W	MSB1	P21339	1137 aa	Known RBP	4.89	□□□□□ -1.63
LIF1	YGL090W	RNQ1	P25367	405 aa		4.89	□□□□□ -1.63
LIF1	YGL090W	NAP1	P25293	417 aa	Known RBP	4.88	□□□□□ -1.63
LIF1	YGL090W	RRN6	P32786	894 aa		4.88	□□□□□ -1.63
LIF1	YGL090W	PAN5	P38787	379 aa		4.88	□□□□□ -1.63
LIF1	YGL090W	ALD3	P54114	506 aa		4.88	□□□□□ -1.63
LIF1	YGL090W	BOL3	P39724	118 aa		4.87	□□□□□ -1.63
LIF1	YGL090W	BIO5	P53744	561 aa	Known RBP	4.87	□□□□□ -1.63
LIF1	YGL090W	APC11	Q12157	165 aa		4.87	□□□□□ -1.63
LIF1	YGL090W	TIF6	Q12522	245 aa	Known RBP	4.87	□□□□□ -1.63
LIF1	YGL090W	SUB2	Q07478	446 aa	Known RBP	4.86	□□□□□ -1.63
LIF1	YGL090W	FUR4	P05316	633 aa	Known RBP	4.85	□□□□□ -1.63
LIF1	YGL090W	RAD55	P38953	406 aa		4.85	□□□□□ -1.63
LIF1	YGL090W	FUS1	P11710	512 aa		4.84	□□□□□ -1.63
LIF1	YGL090W	SEG2	P34250	1132 aa		4.84	□□□□□ -1.63
LIF1	YGL090W	NTA1	P40354	457 aa		4.84	□□□□□ -1.63
LIF1	YGL090W	LEM3	P42838	414 aa		4.84	□□□□□ -1.63
LIF1	YGL090W	LSO1	Q3E827	93 aa		4.84	□□□□□ -1.63
LIF1	YGL090W	MAE1	P36013	669 aa	Known RBP	4.83	□□□□□ -1.64
LIF1	YGL090W	PSY2	P40164	858 aa		4.83	□□□□□ -1.64
LIF1	YGL090W	NIT1	P40447	199 aa		4.83	□□□□□ -1.64
LIF1	YGL090W	NEO1	P40527	1151 aa		4.83	□□□□□ -1.64
LIF1	YGL090W	YJR124C	P47159	448 aa		4.83	□□□□□ -1.64
LIF1	YGL090W	GUP1	P53154	560 aa		4.83	□□□□□ -1.64
LIF1	YGL090W	SOG2	Q08817	791 aa		4.83	□□□□□ -1.64
LIF1	YGL090W	ERS1	P17261	260 aa		4.82	□□□□□ -1.64
LIF1	YGL090W	YBR287W	P38355	427 aa		4.82	□□□□□ -1.64
LIF1	YGL090W	POL5	P39985	1022 aa	Known RBP	4.82	□□□□□ -1.64
LIF1	YGL090W	ECL1	P48235	211 aa		4.82	□□□□□ -1.64
LIF1	YGL090W	NCE103	P53615	221 aa		4.82	□□□□□ -1.64
LIF1	YGL090W	YNR065C	P53751	1116 aa		4.82	□□□□□ -1.64
LIF1	YGL090W	SDH1	Q00711	640 aa		4.82	□□□□□ -1.64
LIF1	YGL090W	PYC2	P32327	1180 aa	Known RBP	4.81	□□□□□ -1.64
LIF1	YGL090W	LRG1	P35688	1017 aa		4.81	□□□□□ -1.64
LIF1	YGL090W	YKL222C	P35995	705 aa		4.81	□□□□□ -1.64
LIF1	YGL090W	IRS4	P36115	615 aa	Known RBP	4.81	□□□□□ -1.64
LIF1	YGL090W	RLF2	Q12495	606 aa		4.81	□□□□□ -1.64
LIF1	YGL090W	YCR015C	P25616	317 aa		4.8	□□□□□ -1.64
LIF1	YGL090W	POL12	P38121	705 aa	Predicted RBP	4.8	□□□□□ -1.64
LIF1	YGL090W	SEA4	P38164	1038 aa		4.8	□□□□□ -1.64
LIF1	YGL090W	KIP3	P53086	805 aa	Known RBP	4.8	□□□□□ -1.64
LIF1	YGL090W	ELG1	Q12050	791 aa		4.8	□□□□□ -1.64
LIF1	YGL090W	GLO4	Q12320	285 aa		4.8	□□□□□ -1.64
LIF1	YGL090W	SMC1	P32908	1225 aa		4.79	□□□□□ -1.64
LIF1	YGL090W	GLO3	P38682	493 aa	Known RBP	4.79	□□□□□ -1.64
LIF1	YGL090W	HAS1	Q03532	505 aa	Known RBP	4.79	□□□□□ -1.64
LIF1	YGL090W	SPO71	Q03868	1245 aa		4.79	□□□□□ -1.64
LIF1	YGL090W	GIC2	Q06648	383 aa		4.79	□□□□□ -1.64
LIF1	YGL090W	PRP43	P53131	767 aa	Known RBP	4.78	□□□□□ -1.64
LIF1	YGL090W	KAR5	Q04746	504 aa		4.78	□□□□□ -1.64
LIF1	YGL090W	DFG16	Q99234	619 aa		4.78	□□□□□ -1.64
LIF1	YGL090W	GCD1	P09032	578 aa	Predicted RBP	4.77	□□□□□ -1.65
LIF1	YGL090W	HVG1	P0CE11	249 aa		4.77	□□□□□ -1.65
LIF1	YGL090W	CTR9	P89105	1077 aa		4.77	□□□□□ -1.65
LIF1	YGL090W	COB	P00163	385 aa		4.76	□□□□□ -1.65
LIF1	YGL090W	QDR1	P40475	563 aa		4.76	□□□□□ -1.65
LIF1	YGL090W	RPL34A	P87262	121 aa	Predicted RBP	4.76	□□□□□ -1.65
LIF1	YGL090W	DUR3	P33413	735 aa		4.75	□□□□□ -1.65
LIF1	YGL090W	FET4	P40988	552 aa		4.75	□□□□□ -1.65
LIF1	YGL090W	YMR074C	Q04773	145 aa		4.75	□□□□□ -1.65
LIF1	YGL090W	NSI1	Q12457	570 aa		4.75	□□□□□ -1.65
LIF1	YGL090W	GAS1	P22146	559 aa	Known RBP	4.74	□□□□□ -1.65
LIF1	YGL090W	ORC1	P54784	914 aa	Predicted RBP	4.74	□□□□□ -1.65
LIF1	YGL090W	ESC8	Q08119	714 aa		4.74	□□□□□ -1.65
LIF1	YGL090W	IOC4	Q04213	475 aa		4.73	□□□□□ -1.65
LIF1	YGL090W	YHL008C	P38750	627 aa		4.72	□□□□□ -1.65
LIF1	YGL090W	MMM1	P41800	426 aa		4.72	□□□□□ -1.65
LIF1	YGL090W	GPT2	P36148	743 aa		4.71	□□□□□ -1.66
LIF1	YGL090W	FAR11	P53917	953 aa		4.71	□□□□□ -1.66
LIF1	YGL090W	WHI3	P34761	661 aa	Known RBP	4.7	□□□□□ -1.66
LIF1	YGL090W	CIT3	P43635	486 aa		4.7	□□□□□ -1.66
LIF1	YGL090W	CMR1	Q12510	522 aa	Known RBP	4.7	□□□□□ -1.66
LIF1	YGL090W	NPR1	P22211	790 aa		4.69	□□□□□ -1.66
LIF1	YGL090W	ECM2	P38241	364 aa	Known RBP	4.69	□□□□□ -1.66
LIF1	YGL090W	GIP4	P39732	760 aa		4.69	□□□□□ -1.66
LIF1	YGL090W	UFD2	P54860	961 aa		4.69	□□□□□ -1.66
LIF1	YGL090W	RSC4	Q02206	625 aa		4.69	□□□□□ -1.66
LIF1	YGL090W	URN1	Q06525	465 aa	Known RBP	4.69	□□□□□ -1.66
LIF1	YGL090W	ALG6	Q12001	544 aa	Known RBP	4.69	□□□□□ -1.66
LIF1	YGL090W	YOR223W	Q12015	292 aa		4.69	□□□□□ -1.66
LIF1	YGL090W	HSP78	P33416	811 aa		4.68	□□□□□ -1.66
LIF1	YGL090W	RIM11	P38615	370 aa		4.68	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 52.8 ms