RNA–Protein interactions for RNA: YER139C

RTR1, Transcript of CTD phosphatase, yeastyeast

Gene RTR1, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTR1YER139C SOG2Q08817 791 aa5.93□□□□□ -1.46
RTR1YER139C POL5P39985 1022 aaKnown RBP5.92□□□□□ -1.46
RTR1YER139C LEM3P42838 414 aa5.91□□□□□ -1.46
RTR1YER139C NCE103P53615 221 aa5.91□□□□□ -1.46
RTR1YER139C SDH1Q00711 640 aa5.91□□□□□ -1.46
RTR1YER139C FUS1P11710 512 aa5.9□□□□□ -1.46
RTR1YER139C MSB1P21339 1137 aaKnown RBP5.9□□□□□ -1.46
RTR1YER139C RNQ1P25367 405 aa5.9□□□□□ -1.46
RTR1YER139C CPS1P27614 576 aa5.9□□□□□ -1.46
RTR1YER139C MAE1P36013 669 aaKnown RBP5.9□□□□□ -1.46
RTR1YER139C PUN1Q06991 263 aa5.9□□□□□ -1.46
RTR1YER139C AIM46P38885 310 aa5.89□□□□□ -1.47
RTR1YER139C ELG1Q12050 791 aa5.89□□□□□ -1.47
RTR1YER139C PUP1P25043 261 aa5.88□□□□□ -1.47
RTR1YER139C FIR1P40020 876 aa5.88□□□□□ -1.47
RTR1YER139C HXT8P40886 569 aa5.88□□□□□ -1.47
RTR1YER139C ERS1P17261 260 aa5.87□□□□□ -1.47
RTR1YER139C SPO71Q03868 1245 aa5.87□□□□□ -1.47
RTR1YER139C PUF6Q04373 656 aaKnown RBP5.87□□□□□ -1.47
RTR1YER139C KTR2P33550 425 aa5.86□□□□□ -1.47
RTR1YER139C SEG2P34250 1132 aa5.86□□□□□ -1.47
RTR1YER139C UBP5P39944 805 aa5.86□□□□□ -1.47
RTR1YER139C SRS2P12954 1174 aa5.85□□□□□ -1.47
RTR1YER139C LRG1P35688 1017 aa5.85□□□□□ -1.47
RTR1YER139C YBR287WP38355 427 aa5.85□□□□□ -1.47
RTR1YER139C NEO1P40527 1151 aa5.85□□□□□ -1.47
RTR1YER139C RGD2P43556 714 aa5.85□□□□□ -1.47
RTR1YER139C KIP3P53086 805 aaKnown RBP5.85□□□□□ -1.47
RTR1YER139C GCD1P09032 578 aaPredicted RBP5.84□□□□□ -1.47
RTR1YER139C BOI1P38041 980 aaKnown RBP5.84□□□□□ -1.47
RTR1YER139C GIC2Q06648 383 aa5.84□□□□□ -1.47
RTR1YER139C POL12P38121 705 aaPredicted RBP5.83□□□□□ -1.48
RTR1YER139C YJR124CP47159 448 aa5.83□□□□□ -1.48
RTR1YER139C YNR065CP53751 1116 aa5.83□□□□□ -1.48
RTR1YER139C SUT1P53032 299 aaKnown RBP5.82□□□□□ -1.48
RTR1YER139C HAS1Q03532 505 aaKnown RBP5.82□□□□□ -1.48
RTR1YER139C HVG1P0CE11 249 aa5.81□□□□□ -1.48
RTR1YER139C NTA1P40354 457 aa5.81□□□□□ -1.48
RTR1YER139C RPB10P22139 70 aa5.8□□□□□ -1.48
RTR1YER139C CWC15Q03772 175 aaKnown RBP5.8□□□□□ -1.48
RTR1YER139C APC11Q12157 165 aa5.8□□□□□ -1.48
RTR1YER139C TIF6Q12522 245 aaKnown RBP5.8□□□□□ -1.48
RTR1YER139C GLO4Q12320 285 aa5.79□□□□□ -1.48
RTR1YER139C DFG16Q99234 619 aa5.79□□□□□ -1.48
RTR1YER139C RAD55P38953 406 aa5.78□□□□□ -1.48
RTR1YER139C NIT1P40447 199 aa5.78□□□□□ -1.48
RTR1YER139C ECL1P48235 211 aa5.78□□□□□ -1.48
RTR1YER139C YML083CQ04526 418 aa5.78□□□□□ -1.48
RTR1YER139C WHI3P34761 661 aaKnown RBP5.77□□□□□ -1.49
RTR1YER139C FET4P40988 552 aa5.77□□□□□ -1.49
RTR1YER139C MMM1P41800 426 aa5.77□□□□□ -1.49
RTR1YER139C FAR11P53917 953 aa5.77□□□□□ -1.49
RTR1YER139C PYC2P32327 1180 aaKnown RBP5.76□□□□□ -1.49
RTR1YER139C PSY2P40164 858 aa5.76□□□□□ -1.49
RTR1YER139C PNP1Q05788 311 aa5.76□□□□□ -1.49
RTR1YER139C YOR223WQ12015 292 aa5.76□□□□□ -1.49
RTR1YER139C RRN6P32786 894 aa5.75□□□□□ -1.49
RTR1YER139C YMR074CQ04773 145 aa5.75□□□□□ -1.49
RTR1YER139C GAS1P22146 559 aaKnown RBP5.74□□□□□ -1.49
RTR1YER139C IRS4P36115 615 aaKnown RBP5.74□□□□□ -1.49
RTR1YER139C GPT2P36148 743 aa5.74□□□□□ -1.49
RTR1YER139C CIT3P43635 486 aa5.74□□□□□ -1.49
RTR1YER139C PRP43P53131 767 aaKnown RBP5.74□□□□□ -1.49
RTR1YER139C YCR015CP25616 317 aa5.73□□□□□ -1.49
RTR1YER139C YKL222CP35995 705 aa5.73□□□□□ -1.49
RTR1YER139C YHL008CP38750 627 aa5.73□□□□□ -1.49
RTR1YER139C NSI1Q12457 570 aa5.73□□□□□ -1.49
RTR1YER139C SMC1P32908 1225 aa5.72□□□□□ -1.49
RTR1YER139C HSP78P33416 811 aa5.71□□□□□ -1.5
RTR1YER139C DMA2P53924 522 aa5.71□□□□□ -1.5
RTR1YER139C NOB1Q08444 459 aaKnown RBP5.71□□□□□ -1.5
RTR1YER139C RCM1P53972 490 aa5.7□□□□□ -1.5
RTR1YER139C DOT1Q04089 582 aaKnown RBP5.7□□□□□ -1.5
RTR1YER139C CDA2Q06703 312 aa5.7□□□□□ -1.5
RTR1YER139C ESC8Q08119 714 aa5.7□□□□□ -1.5
RTR1YER139C LSO1Q3E827 93 aa5.7□□□□□ -1.5
RTR1YER139C OYE3P41816 400 aaPredicted RBP5.69□□□□□ -1.5
RTR1YER139C TSA1P34760 196 aaKnown RBP5.68□□□□□ -1.5
RTR1YER139C YOR059CQ08448 450 aaKnown RBP5.68□□□□□ -1.5
RTR1YER139C CTR9P89105 1077 aa5.67□□□□□ -1.5
RTR1YER139C SSA4P22202 642 aaKnown RBP5.66□□□□□ -1.5
RTR1YER139C TAF1P46677 1066 aa5.66□□□□□ -1.5
RTR1YER139C GCV1P48015 400 aa5.66□□□□□ -1.5
RTR1YER139C YIG1Q08956 461 aa5.66□□□□□ -1.5
RTR1YER139C COBP00163 385 aa5.65□□□□□ -1.5
RTR1YER139C LEO1P38439 464 aa5.65□□□□□ -1.5
RTR1YER139C BOL3P39724 118 aa5.65□□□□□ -1.5
RTR1YER139C YLL054CQ12244 843 aa5.65□□□□□ -1.5
RTR1YER139C FUR4P05316 633 aaKnown RBP5.64□□□□□ -1.51
RTR1YER139C RPS4AP0CX35 261 aaKnown RBP5.63□□□□□ -1.51
RTR1YER139C RPS4BP0CX36 261 aaKnown RBP5.63□□□□□ -1.51
RTR1YER139C ADP1P25371 1049 aa5.62□□□□□ -1.51
RTR1YER139C GIP4P39732 760 aa5.62□□□□□ -1.51
RTR1YER139C EAR1Q03212 550 aa5.62□□□□□ -1.51
RTR1YER139C HTS1P07263 546 aaKnown RBP5.61□□□□□ -1.51
RTR1YER139C NPR1P22211 790 aa5.61□□□□□ -1.51
RTR1YER139C THI80P35202 319 aa5.61□□□□□ -1.51
RTR1YER139C RIM11P38615 370 aa5.61□□□□□ -1.51
RTR1YER139C MSH4P40965 878 aaPredicted RBP5.61□□□□□ -1.51
RTR1YER139C ALT1P52893 592 aa5.61□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms