RNA–Protein interactions for RNA: YER127W

LCP5, Essential protein involved in maturation of 18S rRNA, yeastyeast

Gene LCP5, Length 1,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCP5YER127W YIR007WP40566 764 aa9.87□□□□□ -0.83
LCP5YER127W PPT1P53043 513 aa9.87□□□□□ -0.83
LCP5YER127W CAF120P53836 1060 aa9.87□□□□□ -0.83
LCP5YER127W RSC2Q06488 889 aa9.87□□□□□ -0.83
LCP5YER127W GAR1P28007 205 aaKnown RBP9.86□□□□□ -0.83
LCP5YER127W YJL181WP46987 611 aa9.86□□□□□ -0.83
LCP5YER127W MON1P53129 644 aa9.86□□□□□ -0.83
LCP5YER127W YGR122WP53272 402 aa9.86□□□□□ -0.83
LCP5YER127W YER156CP40093 338 aaKnown RBP9.85□□□□□ -0.83
LCP5YER127W COBP00163 385 aa9.84□□□□□ -0.83
LCP5YER127W IDI1P15496 288 aa9.84□□□□□ -0.83
LCP5YER127W PRP40P33203 583 aaKnown RBP9.84□□□□□ -0.83
LCP5YER127W FAA3P39002 694 aa9.84□□□□□ -0.83
LCP5YER127W CEM1P39525 442 aa9.84□□□□□ -0.83
LCP5YER127W ACO2P39533 789 aa9.84□□□□□ -0.83
LCP5YER127W CCP1P00431 361 aa9.83□□□□□ -0.84
LCP5YER127W KAR2P16474 682 aaKnown RBP9.83□□□□□ -0.84
LCP5YER127W NUT1P53114 1132 aa9.83□□□□□ -0.84
LCP5YER127W HXK1P04806 485 aaKnown RBP9.82□□□□□ -0.84
LCP5YER127W CYC8P14922 966 aa9.82□□□□□ -0.84
LCP5YER127W MSC7P38694 644 aa9.82□□□□□ -0.84
LCP5YER127W RAD2P07276 1031 aa9.81□□□□□ -0.84
LCP5YER127W DUR3P33413 735 aa9.81□□□□□ -0.84
LCP5YER127W NAP1P25293 417 aaKnown RBP9.8□□□□□ -0.84
LCP5YER127W RVS167P39743 482 aaKnown RBP9.8□□□□□ -0.84
LCP5YER127W MRPS18P42847 217 aa9.8□□□□□ -0.84
LCP5YER127W RMD1Q03441 430 aa9.8□□□□□ -0.84
LCP5YER127W ESF1Q06344 628 aaKnown RBP9.8□□□□□ -0.84
LCP5YER127W YDR461C-AQ2V2P7 80 aa9.8□□□□□ -0.84
LCP5YER127W TY1A-DR2Q03964 440 aaKnown RBP9.79□□□□□ -0.84
LCP5YER127W UGA4P32837 571 aa9.78□□□□□ -0.84
LCP5YER127W PRK1P40494 810 aa9.78□□□□□ -0.84
LCP5YER127W MSH6Q03834 1242 aa9.78□□□□□ -0.84
LCP5YER127W SYT1Q06836 1226 aa9.78□□□□□ -0.84
LCP5YER127W FUS1P11710 512 aa9.77□□□□□ -0.85
LCP5YER127W GBP2P25555 427 aaKnown RBP RIP-Chip data9.77□□□□□ -0.85 RIP-Chip
LCP5YER127W MCM5P29496 775 aaKnown RBP9.77□□□□□ -0.85
LCP5YER127W MAD1P40957 749 aa9.77□□□□□ -0.85
LCP5YER127W ULP1Q02724 621 aa9.77□□□□□ -0.85
LCP5YER127W PMT7Q06644 662 aa9.77□□□□□ -0.85
LCP5YER127W INP51P40559 946 aaKnown RBP9.76□□□□□ -0.85
LCP5YER127W MCD1Q12158 566 aa9.76□□□□□ -0.85
LCP5YER127W MRP10O75012 95 aa9.75□□□□□ -0.85
LCP5YER127W PRE9P23638 258 aaKnown RBP9.74□□□□□ -0.85
LCP5YER127W PET112P33893 541 aa9.74□□□□□ -0.85
LCP5YER127W LYS5P50113 272 aa9.74□□□□□ -0.85
LCP5YER127W ALD3P54114 506 aa9.74□□□□□ -0.85
LCP5YER127W YPL109CQ02981 657 aa9.74□□□□□ -0.85
LCP5YER127W GLO4Q12320 285 aa9.74□□□□□ -0.85
LCP5YER127W NPR1P22211 790 aa9.73□□□□□ -0.85
LCP5YER127W ADI1Q03677 179 aa9.73□□□□□ -0.85
LCP5YER127W RIM11P38615 370 aa9.72□□□□□ -0.85
LCP5YER127W RSM26P47141 266 aa9.72□□□□□ -0.85
LCP5YER127W BIO5P53744 561 aaKnown RBP9.72□□□□□ -0.85
LCP5YER127W YAF9P53930 226 aa9.72□□□□□ -0.85
LCP5YER127W CMR1Q12510 522 aaKnown RBP9.72□□□□□ -0.85
LCP5YER127W SQT1P35184 431 aa9.71□□□□□ -0.86
LCP5YER127W SAP155P43612 1002 aa9.71□□□□□ -0.86
LCP5YER127W YJR124CP47159 448 aa9.71□□□□□ -0.86
LCP5YER127W MAG2Q06436 670 aaKnown RBP9.71□□□□□ -0.86
LCP5YER127W CLN2P20438 545 aa9.7□□□□□ -0.86
LCP5YER127W TFA2P36145 328 aa9.68□□□□□ -0.86
LCP5YER127W CWC24P53769 259 aa9.68□□□□□ -0.86
LCP5YER127W PEX13P80667 386 aa9.68□□□□□ -0.86
LCP5YER127W DNA2P38859 1522 aa9.67□□□□□ -0.86
LCP5YER127W TCB3Q03640 1545 aaKnown RBP9.67□□□□□ -0.86
LCP5YER127W MNR2P35724 969 aa9.67□□□□□ -0.86
LCP5YER127W VAC8P39968 578 aa9.67□□□□□ -0.86
LCP5YER127W PIC2P40035 300 aa9.67□□□□□ -0.86
LCP5YER127W LSB6P42951 607 aa9.67□□□□□ -0.86
LCP5YER127W YNR065CP53751 1116 aa9.67□□□□□ -0.86
LCP5YER127W VPS16Q03308 798 aa9.67□□□□□ -0.86
LCP5YER127W YDL176WQ12027 708 aa9.67□□□□□ -0.86
LCP5YER127W PIN2Q12057 282 aa9.67□□□□□ -0.86
LCP5YER127W PRP5P21372 849 aaPredicted RBP9.66□□□□□ -0.86
LCP5YER127W NEO1P40527 1151 aa9.66□□□□□ -0.86
LCP5YER127W SOK2P53438 785 aaPredicted RBP9.66□□□□□ -0.86
LCP5YER127W ALD6P54115 500 aaKnown RBP9.66□□□□□ -0.86
LCP5YER127W SOG2Q08817 791 aa9.66□□□□□ -0.86
LCP5YER127W PDC5P16467 563 aaKnown RBP9.64□□□□□ -0.87
LCP5YER127W AMN1P38285 549 aaPredicted RBP9.64□□□□□ -0.87
LCP5YER127W PEX28P38848 579 aa9.64□□□□□ -0.87
LCP5YER127W SHU2P38957 223 aa9.64□□□□□ -0.87
LCP5YER127W FET4P40988 552 aa9.64□□□□□ -0.87
LCP5YER127W SWR1Q05471 1514 aa9.64□□□□□ -0.87
LCP5YER127W GPM1P00950 247 aaKnown RBP9.63□□□□□ -0.87
LCP5YER127W HVG1P0CE11 249 aa9.63□□□□□ -0.87
LCP5YER127W GUP1P53154 560 aa9.63□□□□□ -0.87
LCP5YER127W YKL077WP36081 392 aa9.62□□□□□ -0.87
LCP5YER127W MSH3P25336 1018 aa9.61□□□□□ -0.87
LCP5YER127W KNS1P32350 737 aaPredicted RBP9.61□□□□□ -0.87
LCP5YER127W NOG1Q02892 647 aaKnown RBP9.61□□□□□ -0.87
LCP5YER127W HPF1Q05164 967 aa9.61□□□□□ -0.87
LCP5YER127W GCR1P07261 785 aa9.6□□□□□ -0.87
LCP5YER127W GIP2P40036 548 aa9.6□□□□□ -0.87
LCP5YER127W XKS1P42826 600 aa9.6□□□□□ -0.87
LCP5YER127W MRL1Q06815 381 aa9.6□□□□□ -0.87
LCP5YER127W KOG1P38873 1557 aa9.59□□□□□ -0.87
LCP5YER127W HTS1P07263 546 aaKnown RBP9.59□□□□□ -0.87
LCP5YER127W LEM3P42838 414 aa9.59□□□□□ -0.87
Retrieved 100 of 5,963 RNA–protein pairs in 6.8 ms