RNA–Protein interactions for RNA: YDR179C

CSN9, Transcript of Subunit of the Cop9 signalosome, yeast

Gene CSN9, Length 489 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSN9	YDR179C	SOK2	P53438	785 aa	Predicted RBP	3.83	□□□□□ -1.8
CSN9	YDR179C	CHS2	P14180	963 aa		3.82	□□□□□ -1.8
CSN9	YDR179C	SAF1	P38352	637 aa		3.82	□□□□□ -1.8
CSN9	YDR179C	TED1	P40533	473 aa		3.82	□□□□□ -1.8
CSN9	YDR179C	YJL181W	P46987	611 aa		3.82	□□□□□ -1.8
CSN9	YDR179C	PNP1	Q05788	311 aa		3.82	□□□□□ -1.8
CSN9	YDR179C	SOG2	Q08817	791 aa		3.82	□□□□□ -1.8
CSN9	YDR179C	FUS1	P11710	512 aa		3.81	□□□□□ -1.8
CSN9	YDR179C	SMC1	P32908	1225 aa		3.81	□□□□□ -1.8
CSN9	YDR179C	YKL222C	P35995	705 aa		3.81	□□□□□ -1.8
CSN9	YDR179C	NTA1	P40354	457 aa		3.81	□□□□□ -1.8
CSN9	YDR179C	BIO5	P53744	561 aa	Known RBP	3.81	□□□□□ -1.8
CSN9	YDR179C	EMG1	Q06287	252 aa	Known RBP	3.81	□□□□□ -1.8
CSN9	YDR179C	APC11	Q12157	165 aa		3.81	□□□□□ -1.8
CSN9	YDR179C	TY1A-NL1	Q12391	440 aa	Known RBP	3.81	□□□□□ -1.8
CSN9	YDR179C	MAE1	P36013	669 aa	Known RBP	3.8	□□□□□ -1.8
CSN9	YDR179C	TAF1	P46677	1066 aa		3.8	□□□□□ -1.8
CSN9	YDR179C	SPO71	Q03868	1245 aa		3.8	□□□□□ -1.8
CSN9	YDR179C	FUR4	P05316	633 aa	Known RBP	3.79	□□□□□ -1.8
CSN9	YDR179C	SEA4	P38164	1038 aa		3.79	□□□□□ -1.8
CSN9	YDR179C	PAN5	P38787	379 aa		3.79	□□□□□ -1.8
CSN9	YDR179C	YGR130C	P53278	816 aa		3.79	□□□□□ -1.8
CSN9	YDR179C	LSO1	Q3E827	93 aa		3.79	□□□□□ -1.8
CSN9	YDR179C	IRS4	P36115	615 aa	Known RBP	3.78	□□□□□ -1.8
CSN9	YDR179C	RAD55	P38953	406 aa		3.78	□□□□□ -1.8
CSN9	YDR179C	RGD2	P43556	714 aa		3.78	□□□□□ -1.8
CSN9	YDR179C	SUT1	P53032	299 aa	Known RBP	3.78	□□□□□ -1.8
CSN9	YDR179C	ALD3	P54114	506 aa		3.78	□□□□□ -1.8
CSN9	YDR179C	NOB1	Q08444	459 aa	Known RBP	3.78	□□□□□ -1.8
CSN9	YDR179C	REC8	Q12188	680 aa		3.78	□□□□□ -1.8
CSN9	YDR179C	MSB1	P21339	1137 aa	Known RBP	3.77	□□□□□ -1.81
CSN9	YDR179C	SEG2	P34250	1132 aa		3.77	□□□□□ -1.81
CSN9	YDR179C	POL5	P39985	1022 aa	Known RBP	3.77	□□□□□ -1.81
CSN9	YDR179C	FAR11	P53917	953 aa		3.77	□□□□□ -1.81
CSN9	YDR179C	YML083C	Q04526	418 aa		3.77	□□□□□ -1.81
CSN9	YDR179C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	3.77	□□□□□ -1.81	not detected
CSN9	YDR179C	AKR1	P39010	764 aa		3.76	□□□□□ -1.81
CSN9	YDR179C	PSY2	P40164	858 aa		3.76	□□□□□ -1.81
CSN9	YDR179C	SPO74	P45819	413 aa		3.76	□□□□□ -1.81
CSN9	YDR179C	ESC8	Q08119	714 aa		3.76	□□□□□ -1.81
CSN9	YDR179C	ELG1	Q12050	791 aa		3.76	□□□□□ -1.81
CSN9	YDR179C	YLL054C	Q12244	843 aa		3.76	□□□□□ -1.81
CSN9	YDR179C	RLF2	Q12495	606 aa		3.76	□□□□□ -1.81
CSN9	YDR179C	NAM7	P30771	971 aa	Known RBP	3.75	□□□□□ -1.81
CSN9	YDR179C	LRG1	P35688	1017 aa		3.75	□□□□□ -1.81
CSN9	YDR179C	TFA2	P36145	328 aa		3.75	□□□□□ -1.81
CSN9	YDR179C	NEO1	P40527	1151 aa		3.75	□□□□□ -1.81
CSN9	YDR179C	TIF6	Q12522	245 aa	Known RBP	3.75	□□□□□ -1.81
CSN9	YDR179C	CYC7	P00045	113 aa		3.74	□□□□□ -1.81
CSN9	YDR179C	BOI1	P38041	980 aa	Known RBP	3.74	□□□□□ -1.81
CSN9	YDR179C	FET4	P40988	552 aa		3.74	□□□□□ -1.81
CSN9	YDR179C	YJR124C	P47159	448 aa		3.74	□□□□□ -1.81
CSN9	YDR179C	NCE103	P53615	221 aa		3.74	□□□□□ -1.81
CSN9	YDR179C	YNR065C	P53751	1116 aa		3.74	□□□□□ -1.81
CSN9	YDR179C	NSI1	Q12457	570 aa		3.74	□□□□□ -1.81
CSN9	YDR179C	HVG1	P0CE11	249 aa		3.73	□□□□□ -1.81
CSN9	YDR179C	KTR2	P33550	425 aa		3.73	□□□□□ -1.81
CSN9	YDR179C	NIT1	P40447	199 aa		3.73	□□□□□ -1.81
CSN9	YDR179C	UFD2	P54860	961 aa		3.73	□□□□□ -1.81
CSN9	YDR179C	HAS1	Q03532	505 aa	Known RBP	3.73	□□□□□ -1.81
CSN9	YDR179C	GIC2	Q06648	383 aa		3.73	□□□□□ -1.81
CSN9	YDR179C	SUB2	Q07478	446 aa	Known RBP	3.73	□□□□□ -1.81
CSN9	YDR179C	YOR223W	Q12015	292 aa		3.73	□□□□□ -1.81
CSN9	YDR179C	GLO4	Q12320	285 aa		3.73	□□□□□ -1.81
CSN9	YDR179C	RPB10	P22139	70 aa		3.72	□□□□□ -1.81
CSN9	YDR179C	ECM2	P38241	364 aa	Known RBP	3.72	□□□□□ -1.81
CSN9	YDR179C	RPL34A	P87262	121 aa	Predicted RBP	3.72	□□□□□ -1.81
CSN9	YDR179C	YOR059C	Q08448	450 aa	Known RBP	3.72	□□□□□ -1.81
CSN9	YDR179C	PYC2	P32327	1180 aa	Known RBP	3.71	□□□□□ -1.82
CSN9	YDR179C	BOL3	P39724	118 aa		3.71	□□□□□ -1.82
CSN9	YDR179C	ERS1	P17261	260 aa		3.7	□□□□□ -1.82
CSN9	YDR179C	MMM1	P41800	426 aa		3.7	□□□□□ -1.82
CSN9	YDR179C	GCV1	P48015	400 aa		3.7	□□□□□ -1.82
CSN9	YDR179C	KIP3	P53086	805 aa	Known RBP	3.7	□□□□□ -1.82
CSN9	YDR179C	RSC4	Q02206	625 aa		3.7	□□□□□ -1.82
CSN9	YDR179C	YMR074C	Q04773	145 aa		3.7	□□□□□ -1.82
CSN9	YDR179C	GIP4	P39732	760 aa		3.69	□□□□□ -1.82
CSN9	YDR179C	CIT3	P43635	486 aa		3.69	□□□□□ -1.82
CSN9	YDR179C	ATG1	P53104	897 aa		3.69	□□□□□ -1.82
CSN9	YDR179C	KAR5	Q04746	504 aa		3.69	□□□□□ -1.82
CSN9	YDR179C	YIG1	Q08956	461 aa		3.69	□□□□□ -1.82
CSN9	YDR179C	GLO3	P38682	493 aa	Known RBP	3.68	□□□□□ -1.82
CSN9	YDR179C	ACF4	P47129	309 aa		3.68	□□□□□ -1.82
CSN9	YDR179C	QDR1	P40475	563 aa		3.67	□□□□□ -1.82
CSN9	YDR179C	ECL1	P48235	211 aa		3.67	□□□□□ -1.82
CSN9	YDR179C	TAD3	Q9URQ3	322 aa		3.67	□□□□□ -1.82
CSN9	YDR179C	HTS1	P07263	546 aa	Known RBP	3.66	□□□□□ -1.82
CSN9	YDR179C	PRP5	P21372	849 aa	Predicted RBP	3.66	□□□□□ -1.82
CSN9	YDR179C	NPR1	P22211	790 aa		3.66	□□□□□ -1.82
CSN9	YDR179C	YPT53	P36019	220 aa		3.66	□□□□□ -1.82
CSN9	YDR179C	YNL011C	P53980	444 aa		3.66	□□□□□ -1.82
CSN9	YDR179C	SDH1	Q00711	640 aa		3.66	□□□□□ -1.82
CSN9	YDR179C	MEC3	Q02574	474 aa		3.66	□□□□□ -1.82
CSN9	YDR179C	MSH6	Q03834	1242 aa		3.66	□□□□□ -1.82
CSN9	YDR179C	DOT1	Q04089	582 aa	Known RBP	3.66	□□□□□ -1.82
CSN9	YDR179C	SSA1	P10591	642 aa	Known RBP	3.65	□□□□□ -1.83
CSN9	YDR179C	GPT2	P36148	743 aa		3.65	□□□□□ -1.83
CSN9	YDR179C	ARL1	P38116	183 aa	Known RBP	3.65	□□□□□ -1.83
CSN9	YDR179C	RIM11	P38615	370 aa		3.65	□□□□□ -1.83
CSN9	YDR179C	CTR9	P89105	1077 aa		3.65	□□□□□ -1.83

Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms