RNA–Protein interactions for RNA: YDL154W

MSH5, Transcript of Protein of the MutS family, yeastyeast

Gene MSH5, Length 2,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH5YDL154W SHM1P37292 490 aaPredicted RBP2.56□□□□□ -2
MSH5YDL154W NCL1P38205 684 aaKnown RBP2.56□□□□□ -2
MSH5YDL154W BSD2P38356 321 aa2.56□□□□□ -2
MSH5YDL154W NTA1P40354 457 aa2.56□□□□□ -2
MSH5YDL154W SCW11P53189 542 aa2.56□□□□□ -2
MSH5YDL154W YOR296WQ08748 1289 aa2.56□□□□□ -2
MSH5YDL154W YRF1-1P0CX20 1796 aa2.56□□□□□ -2
MSH5YDL154W YRF1-5P0CX21 1796 aa2.56□□□□□ -2
MSH5YDL154W YRF1-8P0CX22 1796 aa2.56□□□□□ -2
MSH5YDL154W PHO4P07270 312 aaKnown RBP2.56□□□□□ -2
MSH5YDL154W FYV10P40492 516 aa2.56□□□□□ -2
MSH5YDL154W VTC4P47075 721 aa2.56□□□□□ -2
MSH5YDL154W RRP15Q06511 250 aaPredicted RBP2.56□□□□□ -2
MSH5YDL154W KAR2P16474 682 aaKnown RBP2.55□□□□□ -2
MSH5YDL154W RGP1P16664 663 aa2.55□□□□□ -2
MSH5YDL154W MRPL16P38064 232 aa2.55□□□□□ -2
MSH5YDL154W RPS26AP39938 119 aaKnown RBP2.55□□□□□ -2
MSH5YDL154W RPS26BP39939 119 aaKnown RBP2.55□□□□□ -2
MSH5YDL154W CUS1Q02554 436 aaPredicted RBP2.55□□□□□ -2
MSH5YDL154W YMR265CQ03508 461 aaKnown RBP2.55□□□□□ -2
MSH5YDL154W DAL4Q04895 635 aa2.55□□□□□ -2
MSH5YDL154W ESF1Q06344 628 aaKnown RBP2.55□□□□□ -2
MSH5YDL154W GPI13Q07830 1017 aa2.55□□□□□ -2
MSH5YDL154W TIF6Q12522 245 aaKnown RBP2.55□□□□□ -2
MSH5YDL154W YPR117WQ06116 2489 aa2.55□□□□□ -2
MSH5YDL154W LEU1P07264 779 aaKnown RBP2.55□□□□□ -2
MSH5YDL154W CLN2P20438 545 aa2.55□□□□□ -2
MSH5YDL154W DAK2P43550 591 aa2.55□□□□□ -2
MSH5YDL154W YJR107WP47145 328 aa2.55□□□□□ -2
MSH5YDL154W OPT2Q06593 877 aa2.55□□□□□ -2
MSH5YDL154W INP54Q08227 384 aaKnown RBP2.55□□□□□ -2
MSH5YDL154W TY1A-DR3Q12441 440 aa2.55□□□□□ -2
MSH5YDL154W TRM3Q07527 1436 aa2.55□□□□□ -2
MSH5YDL154W CUP1-1P0CX80 61 aa2.55□□□□□ -2
MSH5YDL154W CUP1-2P0CX81 61 aa2.55□□□□□ -2
MSH5YDL154W MON1P53129 644 aa2.55□□□□□ -2
MSH5YDL154W YPL062WQ02781 134 aa2.55□□□□□ -2
MSH5YDL154W SPR28Q04921 423 aa2.55□□□□□ -2
MSH5YDL154W RSC2Q06488 889 aa2.55□□□□□ -2
MSH5YDL154W CDC19P00549 500 aaKnown RBP2.54□□□□□ -2
MSH5YDL154W RPS31P05759 152 aaKnown RBP2.54□□□□□ -2
MSH5YDL154W SLA1P32790 1244 aa2.54□□□□□ -2
MSH5YDL154W SQT1P35184 431 aa2.54□□□□□ -2
MSH5YDL154W GLY1P37303 387 aaKnown RBP2.54□□□□□ -2
MSH5YDL154W MRPS18P42847 217 aa2.54□□□□□ -2
MSH5YDL154W RGD2P43556 714 aa2.54□□□□□ -2
MSH5YDL154W YJL181WP46987 611 aa2.54□□□□□ -2
MSH5YDL154W RSC4Q02206 625 aa2.54□□□□□ -2
MSH5YDL154W YCS4Q06156 1176 aa2.54□□□□□ -2
MSH5YDL154W MNL2Q12205 849 aa2.54□□□□□ -2
MSH5YDL154W RMD1Q03441 430 aa2.54□□□□□ -2
MSH5YDL154W YRF1-2P40105 1681 aa2.53□□□□□ -2
MSH5YDL154W PET112P33893 541 aa2.53□□□□□ -2
MSH5YDL154W APM2P38700 605 aa2.53□□□□□ -2
MSH5YDL154W OSH7P38755 437 aa2.53□□□□□ -2
MSH5YDL154W RSM26P47141 266 aa2.53□□□□□ -2
MSH5YDL154W PPT1P53043 513 aa2.53□□□□□ -2
MSH5YDL154W FPS1P23900 669 aa2.53□□□□□ -2
MSH5YDL154W PRP40P33203 583 aaKnown RBP2.53□□□□□ -2
MSH5YDL154W KTR2P33550 425 aa2.53□□□□□ -2
MSH5YDL154W NNF1P47149 201 aa2.53□□□□□ -2
MSH5YDL154W POL1P13382 1468 aa2.52□□□□□ -2.01
MSH5YDL154W NUP170P38181 1502 aa2.52□□□□□ -2.01
MSH5YDL154W GDB1Q06625 1536 aa2.52□□□□□ -2.01
MSH5YDL154W FLP1P03870 423 aa2.52□□□□□ -2.01
MSH5YDL154W RPC31P17890 251 aa2.52□□□□□ -2.01
MSH5YDL154W YGR122WP53272 402 aa2.52□□□□□ -2.01
MSH5YDL154W KRE33P53914 1056 aaKnown RBP2.52□□□□□ -2.01
MSH5YDL154W YDR444WQ04093 687 aa2.52□□□□□ -2.01
MSH5YDL154W CEM1P39525 442 aa2.52□□□□□ -2.01
MSH5YDL154W VAC8P39968 578 aa2.52□□□□□ -2.01
MSH5YDL154W YIL165CP40446 119 aa2.52□□□□□ -2.01
MSH5YDL154W ALD6P54115 500 aaKnown RBP2.52□□□□□ -2.01
MSH5YDL154W PMT7Q06644 662 aa2.52□□□□□ -2.01
MSH5YDL154W WRS1Q12109 432 aaKnown RBP2.52□□□□□ -2.01
MSH5YDL154W MCD1Q12158 566 aa2.52□□□□□ -2.01
MSH5YDL154W BCK1Q01389 1478 aa2.52□□□□□ -2.01
MSH5YDL154W ESP1Q03018 1630 aa2.51□□□□□ -2.01
MSH5YDL154W ULS1Q08562 1619 aa2.51□□□□□ -2.01
MSH5YDL154W RAD2P07276 1031 aa2.51□□□□□ -2.01
MSH5YDL154W MCM5P29496 775 aaKnown RBP2.51□□□□□ -2.01
MSH5YDL154W PYC2P32327 1180 aaKnown RBP2.51□□□□□ -2.01
MSH5YDL154W NAB2P32505 525 aaKnown RBP RIP-Chip data2.51□□□□□ -2.01not detected
MSH5YDL154W ATG14P38270 344 aa2.51□□□□□ -2.01
MSH5YDL154W SKP1P52286 194 aa2.51□□□□□ -2.01
MSH5YDL154W ITC1P53125 1264 aa2.51□□□□□ -2.01
MSH5YDL154W YNR040WP53736 256 aa2.51□□□□□ -2.01
MSH5YDL154W HEH2Q03281 663 aa2.51□□□□□ -2.01
MSH5YDL154W EMG1Q06287 252 aaKnown RBP2.51□□□□□ -2.01
MSH5YDL154W CYC8P14922 966 aa2.51□□□□□ -2.01
MSH5YDL154W RAD27P26793 382 aa2.51□□□□□ -2.01
MSH5YDL154W SHU2P38957 223 aa2.51□□□□□ -2.01
MSH5YDL154W FAA3P39002 694 aa2.51□□□□□ -2.01
MSH5YDL154W EDE1P34216 1381 aa2.51□□□□□ -2.01
MSH5YDL154W TY1B-NL2Q99337 1749 aaKnown RBP2.5□□□□□ -2.01
MSH5YDL154W DIT1P21623 536 aa2.5□□□□□ -2.01
MSH5YDL154W RVS167P39743 482 aaKnown RBP2.5□□□□□ -2.01
MSH5YDL154W ROG3P43602 733 aa2.5□□□□□ -2.01
MSH5YDL154W ADE12P80210 433 aaKnown RBP2.5□□□□□ -2.01
MSH5YDL154W SRC1Q03707 834 aa2.5□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 9.2 ms