RNA–Protein interactions for RNA: YDL006W

PTC1, Transcript of Type 2C protein phosphatase (PP2C), yeastyeast

Gene PTC1, Length 846 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTC1YDL006W CCP1P00431 361 aa6.74□□□□□ -1.33
PTC1YDL006W NAP1P25293 417 aaKnown RBP6.74□□□□□ -1.33
PTC1YDL006W YHL008CP38750 627 aa6.74□□□□□ -1.33
PTC1YDL006W RMD1Q03441 430 aa6.74□□□□□ -1.33
PTC1YDL006W MSH6Q03834 1242 aa6.74□□□□□ -1.33
PTC1YDL006W FLP1P03870 423 aa6.73□□□□□ -1.33
PTC1YDL006W IDI1P15496 288 aa6.73□□□□□ -1.33
PTC1YDL006W FPS1P23900 669 aa6.73□□□□□ -1.33
PTC1YDL006W OYE2Q03558 400 aaKnown RBP6.73□□□□□ -1.33
PTC1YDL006W INP54Q08227 384 aaKnown RBP6.73□□□□□ -1.33
PTC1YDL006W MSC7P38694 644 aa6.72□□□□□ -1.33
PTC1YDL006W YIR007WP40566 764 aa6.72□□□□□ -1.33
PTC1YDL006W YGR122WP53272 402 aa6.72□□□□□ -1.33
PTC1YDL006W KRE33P53914 1056 aaKnown RBP6.72□□□□□ -1.33
PTC1YDL006W YCS4Q06156 1176 aa6.72□□□□□ -1.33
PTC1YDL006W MDS3P53094 1487 aa6.72□□□□□ -1.33
PTC1YDL006W SKI3P17883 1432 aaKnown RBP6.71□□□□□ -1.34
PTC1YDL006W PYC2P32327 1180 aaKnown RBP6.71□□□□□ -1.34
PTC1YDL006W MET1P36150 593 aa6.71□□□□□ -1.34
PTC1YDL006W ECM2P38241 364 aaKnown RBP6.71□□□□□ -1.34
PTC1YDL006W LYS5P50113 272 aa6.71□□□□□ -1.34
PTC1YDL006W PPT1P53043 513 aa6.71□□□□□ -1.34
PTC1YDL006W CTR9P89105 1077 aa6.71□□□□□ -1.34
PTC1YDL006W CEM1P39525 442 aa6.7□□□□□ -1.34
PTC1YDL006W FYV10P40492 516 aa6.7□□□□□ -1.34
PTC1YDL006W SYT1Q06836 1226 aa6.7□□□□□ -1.34
PTC1YDL006W SSK2P53599 1579 aa6.69□□□□□ -1.34
PTC1YDL006W FUS1P11710 512 aa6.69□□□□□ -1.34
PTC1YDL006W KAR2P16474 682 aaKnown RBP6.69□□□□□ -1.34
PTC1YDL006W SAP155P43612 1002 aa6.69□□□□□ -1.34
PTC1YDL006W CAF120P53836 1060 aa6.69□□□□□ -1.34
PTC1YDL006W ADE12P80210 433 aaKnown RBP6.69□□□□□ -1.34
PTC1YDL006W ATG2P53855 1592 aa6.69□□□□□ -1.34
PTC1YDL006W COBP00163 385 aa6.68□□□□□ -1.34
PTC1YDL006W HXK1P04806 485 aaKnown RBP6.68□□□□□ -1.34
PTC1YDL006W PRP40P33203 583 aaKnown RBP6.68□□□□□ -1.34
PTC1YDL006W MET10P39692 1035 aa6.68□□□□□ -1.34
PTC1YDL006W TY1A-DR2Q03964 440 aaKnown RBP6.68□□□□□ -1.34
PTC1YDL006W ESF1Q06344 628 aaKnown RBP6.68□□□□□ -1.34
PTC1YDL006W PRK1P40494 810 aa6.67□□□□□ -1.34
PTC1YDL006W NUT1P53114 1132 aa6.67□□□□□ -1.34
PTC1YDL006W PMT7Q06644 662 aa6.67□□□□□ -1.34
PTC1YDL006W PEP1P32319 1579 aa6.66□□□□□ -1.34
PTC1YDL006W CYC8P14922 966 aa6.66□□□□□ -1.34
PTC1YDL006W MCM2P29469 868 aa6.66□□□□□ -1.34
PTC1YDL006W RIM11P38615 370 aa6.66□□□□□ -1.34
PTC1YDL006W RVS167P39743 482 aaKnown RBP6.66□□□□□ -1.34
PTC1YDL006W ALD3P54114 506 aa6.66□□□□□ -1.34
PTC1YDL006W DAL4Q04895 635 aa6.66□□□□□ -1.34
PTC1YDL006W MCD1Q12158 566 aa6.66□□□□□ -1.34
PTC1YDL006W FAA3P39002 694 aa6.65□□□□□ -1.34
PTC1YDL006W RPS26AP39938 119 aaKnown RBP6.65□□□□□ -1.34
PTC1YDL006W RPS26BP39939 119 aaKnown RBP6.65□□□□□ -1.34
PTC1YDL006W INP51P40559 946 aaKnown RBP6.65□□□□□ -1.34
PTC1YDL006W SPR28Q04921 423 aa6.65□□□□□ -1.34
PTC1YDL006W YDL176WQ12027 708 aa6.65□□□□□ -1.34
PTC1YDL006W ESP1Q03018 1630 aa6.65□□□□□ -1.35
PTC1YDL006W RAD2P07276 1031 aa6.64□□□□□ -1.35
PTC1YDL006W PRP5P21372 849 aaPredicted RBP6.64□□□□□ -1.35
PTC1YDL006W YPL109CQ02981 657 aa6.64□□□□□ -1.35
PTC1YDL006W TOS4Q06266 489 aa6.64□□□□□ -1.35
PTC1YDL006W MYO2P19524 1574 aaKnown RBP6.63□□□□□ -1.35
PTC1YDL006W GAR1P28007 205 aaKnown RBP6.63□□□□□ -1.35
PTC1YDL006W DUR3P33413 735 aa6.63□□□□□ -1.35
PTC1YDL006W JJJ3P47138 172 aa6.63□□□□□ -1.35
PTC1YDL006W BIO5P53744 561 aaKnown RBP6.63□□□□□ -1.35
PTC1YDL006W SOG2Q08817 791 aa6.63□□□□□ -1.35
PTC1YDL006W GLO4Q12320 285 aa6.63□□□□□ -1.35
PTC1YDL006W HVG1P0CE11 249 aa6.62□□□□□ -1.35
PTC1YDL006W PRE9P23638 258 aaKnown RBP6.62□□□□□ -1.35
PTC1YDL006W KNS1P32350 737 aaPredicted RBP6.62□□□□□ -1.35
PTC1YDL006W AMN1P38285 549 aaPredicted RBP6.62□□□□□ -1.35
PTC1YDL006W MRPS18P42847 217 aa6.62□□□□□ -1.35
PTC1YDL006W YAF9P53930 226 aa6.62□□□□□ -1.35
PTC1YDL006W DPH6Q12429 685 aa6.62□□□□□ -1.35
PTC1YDL006W CMR1Q12510 522 aaKnown RBP6.62□□□□□ -1.35
PTC1YDL006W NPR1P22211 790 aa6.61□□□□□ -1.35
PTC1YDL006W MCM5P29496 775 aaKnown RBP6.61□□□□□ -1.35
PTC1YDL006W MNR2P35724 969 aa6.61□□□□□ -1.35
PTC1YDL006W LEM3P42838 414 aa6.61□□□□□ -1.35
PTC1YDL006W YJL181WP46987 611 aa6.61□□□□□ -1.35
PTC1YDL006W MON1P53129 644 aa6.61□□□□□ -1.35
PTC1YDL006W GUP1P53154 560 aa6.61□□□□□ -1.35
PTC1YDL006W ULP1Q02724 621 aa6.61□□□□□ -1.35
PTC1YDL006W ADI1Q03677 179 aa6.61□□□□□ -1.35
PTC1YDL006W GPM1P00950 247 aaKnown RBP6.6□□□□□ -1.35
PTC1YDL006W PDC5P16467 563 aaKnown RBP6.6□□□□□ -1.35
PTC1YDL006W CLN2P20438 545 aa6.6□□□□□ -1.35
PTC1YDL006W TFA2P36145 328 aa6.6□□□□□ -1.35
PTC1YDL006W SHU2P38957 223 aa6.6□□□□□ -1.35
PTC1YDL006W SLP1Q12232 587 aa6.6□□□□□ -1.35
PTC1YDL006W GBP2P25555 427 aaKnown RBP RIP-Chip data6.59□□□□□ -1.35not detected
PTC1YDL006W PEP7P32609 515 aa6.59□□□□□ -1.35
PTC1YDL006W FET4P40988 552 aa6.59□□□□□ -1.35
PTC1YDL006W YPK9Q12697 1472 aa6.59□□□□□ -1.36
PTC1YDL006W MRP10O75012 95 aa6.58□□□□□ -1.36
PTC1YDL006W TAF13P11747 167 aa6.58□□□□□ -1.36
PTC1YDL006W YJR124CP47159 448 aa6.58□□□□□ -1.36
PTC1YDL006W NOG1Q02892 647 aaKnown RBP6.58□□□□□ -1.36
PTC1YDL006W JIP5Q06214 492 aaPredicted RBP6.58□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 45.2 ms