RNA–Protein interactions for RNA: YBR175W

SWD3, Transcript of Essential subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD3, Length 948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD3YBR175W FYV10P40492 516 aa3.91□□□□□ -1.78
SWD3YBR175W ALD3P54114 506 aa3.91□□□□□ -1.78
SWD3YBR175W CAB1Q04430 367 aa3.91□□□□□ -1.78
SWD3YBR175W MNL2Q12205 849 aa3.91□□□□□ -1.78
SWD3YBR175W SWE1P32944 819 aa3.9□□□□□ -1.79
SWD3YBR175W YKL091CP33324 310 aaKnown RBP3.9□□□□□ -1.79
SWD3YBR175W FPR3P38911 411 aaKnown RBP3.9□□□□□ -1.79
SWD3YBR175W IOC3P43596 787 aa3.9□□□□□ -1.79
SWD3YBR175W PRY1P47032 299 aa3.9□□□□□ -1.79
SWD3YBR175W ACF4P47129 309 aa3.9□□□□□ -1.79
SWD3YBR175W ALD6P54115 500 aaKnown RBP3.9□□□□□ -1.79
SWD3YBR175W UBX5Q06682 500 aa3.9□□□□□ -1.79
SWD3YBR175W PUN1Q06991 263 aa3.9□□□□□ -1.79
SWD3YBR175W CIT2P08679 460 aa3.89□□□□□ -1.79
SWD3YBR175W KAP122P32767 1081 aa3.89□□□□□ -1.79
SWD3YBR175W YBR197CP38306 217 aa3.89□□□□□ -1.79
SWD3YBR175W SKP1P52286 194 aa3.89□□□□□ -1.79
SWD3YBR175W ALG12P53730 551 aa3.89□□□□□ -1.79
SWD3YBR175W YPL034WQ03083 165 aa3.89□□□□□ -1.79
SWD3YBR175W HEH2Q03281 663 aa3.89□□□□□ -1.79
SWD3YBR175W MRPL33P20084 86 aa3.88□□□□□ -1.79
SWD3YBR175W TSR4P25040 408 aa3.88□□□□□ -1.79
SWD3YBR175W TOM20P35180 183 aa3.88□□□□□ -1.79
SWD3YBR175W MAD1P40957 749 aa3.88□□□□□ -1.79
SWD3YBR175W OSW7P43611 510 aa3.88□□□□□ -1.79
SWD3YBR175W SUB1P54000 292 aaKnown RBP3.88□□□□□ -1.79
SWD3YBR175W URN1Q06525 465 aaKnown RBP3.88□□□□□ -1.79
SWD3YBR175W RPC31P17890 251 aa3.87□□□□□ -1.79
SWD3YBR175W MCM2P29469 868 aa3.87□□□□□ -1.79
SWD3YBR175W DYS1P38791 387 aa3.87□□□□□ -1.79
SWD3YBR175W PRK1P40494 810 aa3.87□□□□□ -1.79
SWD3YBR175W BUD9P53226 547 aa3.87□□□□□ -1.79
SWD3YBR175W VPS16Q03308 798 aa3.87□□□□□ -1.79
SWD3YBR175W SPR28Q04921 423 aa3.87□□□□□ -1.79
SWD3YBR175W PIN2Q12057 282 aa3.87□□□□□ -1.79
SWD3YBR175W SSF2Q12153 453 aaPredicted RBP3.87□□□□□ -1.79
SWD3YBR175W DNA2P38859 1522 aa3.86□□□□□ -1.79
SWD3YBR175W ISC10P32645 267 aa3.86□□□□□ -1.79
SWD3YBR175W PGM2P37012 569 aaKnown RBP3.86□□□□□ -1.79
SWD3YBR175W QDR2P40474 542 aa3.86□□□□□ -1.79
SWD3YBR175W MTO1P53070 669 aa3.86□□□□□ -1.79
SWD3YBR175W NSE3Q05541 303 aa3.86□□□□□ -1.79
SWD3YBR175W APC11Q12157 165 aa3.86□□□□□ -1.79
SWD3YBR175W LSO1Q3E827 93 aa3.86□□□□□ -1.79
SWD3YBR175W NHA1Q99271 985 aa3.86□□□□□ -1.79
SWD3YBR175W CLN2P20438 545 aa3.85□□□□□ -1.79
SWD3YBR175W VMA3P25515 160 aa3.85□□□□□ -1.79
SWD3YBR175W RPT1P33299 467 aaKnown RBP3.85□□□□□ -1.79
SWD3YBR175W YJL049WP47048 450 aa3.85□□□□□ -1.79
SWD3YBR175W YRB30P53107 440 aaPredicted RBP3.85□□□□□ -1.79
SWD3YBR175W UBP3Q01477 912 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79not detected
SWD3YBR175W FOX2Q02207 900 aaKnown RBP3.85□□□□□ -1.79
SWD3YBR175W RPN4Q03465 531 aa3.85□□□□□ -1.79
SWD3YBR175W TRS120Q04183 1289 aa3.85□□□□□ -1.79
SWD3YBR175W POB3Q04636 552 aaKnown RBP3.85□□□□□ -1.79
SWD3YBR175W WRS1Q12109 432 aaKnown RBP3.85□□□□□ -1.79
SWD3YBR175W PHO4P07270 312 aaKnown RBP3.84□□□□□ -1.79
SWD3YBR175W STI1P15705 589 aaKnown RBP RIP-Chip data3.84□□□□□ -1.79not detected
SWD3YBR175W NAR1P23503 491 aaKnown RBP3.84□□□□□ -1.79
SWD3YBR175W BOI1P38041 980 aaKnown RBP3.84□□□□□ -1.79
SWD3YBR175W LDH1P38139 375 aa3.84□□□□□ -1.79
SWD3YBR175W PBP2P38151 413 aaKnown RBP RIP-Chip data3.84□□□□□ -1.79not detected
SWD3YBR175W NCL1P38205 684 aaKnown RBP3.84□□□□□ -1.79
SWD3YBR175W ALG14P38242 237 aa3.84□□□□□ -1.79
SWD3YBR175W APM2P38700 605 aa3.84□□□□□ -1.79
SWD3YBR175W CUS1Q02554 436 aaPredicted RBP3.84□□□□□ -1.79
SWD3YBR175W VPS72Q03388 795 aa3.84□□□□□ -1.79
SWD3YBR175W RMD1Q03441 430 aa3.84□□□□□ -1.79
SWD3YBR175W GPI13Q07830 1017 aa3.84□□□□□ -1.79
SWD3YBR175W YOR296WQ08748 1289 aa3.84□□□□□ -1.79
SWD3YBR175W CDC53Q12018 815 aaKnown RBP3.84□□□□□ -1.79
SWD3YBR175W SPA2P23201 1466 aaKnown RBP3.84□□□□□ -1.8
SWD3YBR175W SSB1P11484 613 aaKnown RBP3.83□□□□□ -1.8
SWD3YBR175W PEP7P32609 515 aa3.83□□□□□ -1.8
SWD3YBR175W MAC1P35192 417 aa3.83□□□□□ -1.8
SWD3YBR175W GIP1P38229 639 aa3.83□□□□□ -1.8
SWD3YBR175W YBR287WP38355 427 aa3.83□□□□□ -1.8
SWD3YBR175W SSB2P40150 613 aaKnown RBP3.83□□□□□ -1.8
SWD3YBR175W BUD6P41697 788 aa3.83□□□□□ -1.8
SWD3YBR175W GIS4Q04233 774 aa3.83□□□□□ -1.8
SWD3YBR175W AI3P03877 415 aa3.82□□□□□ -1.8
SWD3YBR175W MSN1P22148 382 aa3.82□□□□□ -1.8
SWD3YBR175W PGM1P33401 570 aaKnown RBP3.82□□□□□ -1.8
SWD3YBR175W ISW1P38144 1129 aa3.82□□□□□ -1.8
SWD3YBR175W RPS26AP39938 119 aaKnown RBP3.82□□□□□ -1.8
SWD3YBR175W RPS26BP39939 119 aaKnown RBP3.82□□□□□ -1.8
SWD3YBR175W DAK2P43550 591 aa3.82□□□□□ -1.8
SWD3YBR175W INP52P50942 1183 aa3.82□□□□□ -1.8
SWD3YBR175W YNR040WP53736 256 aa3.82□□□□□ -1.8
SWD3YBR175W ALO1P54783 526 aaKnown RBP3.82□□□□□ -1.8
SWD3YBR175W ESF1Q06344 628 aaKnown RBP3.82□□□□□ -1.8
SWD3YBR175W BDF2Q07442 638 aa3.82□□□□□ -1.8
SWD3YBR175W YOR131CQ12486 218 aa3.82□□□□□ -1.8
SWD3YBR175W GRX4P32642 244 aa3.81□□□□□ -1.8
SWD3YBR175W YER156CP40093 338 aaKnown RBP3.81□□□□□ -1.8
SWD3YBR175W HXT8P40886 569 aa3.81□□□□□ -1.8
SWD3YBR175W CWC24P53769 259 aa3.81□□□□□ -1.8
SWD3YBR175W BUD21Q08492 214 aaPredicted RBP3.81□□□□□ -1.8
SWD3YBR175W YGR161W-CQ3E744 92 aa3.81□□□□□ -1.8
SWD3YBR175W SAC7P17121 654 aa3.8□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 32.8 ms