RNA–Protein interactions for RNA: ENST00000640909.1

KCNC1-213, Transcript of potassium voltage-gated channel subfamily C member 1, humanhuman

TSL 5

Gene KCNC1, Length 1,270 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC1-213ENST00000640909 TRIM37O94972 964 aa22.08■■□□□ 1.13
KCNC1-213ENST00000640909 NBPF8Q3BBV2 869 aa22.08■■□□□ 1.13
KCNC1-213ENST00000640909 NBPF14Q5TI25 921 aa22.08■■□□□ 1.13
KCNC1-213ENST00000640909 SLC4A1APQ9BWU0 796 aaKnown RBP22.07■■□□□ 1.12
KCNC1-213ENST00000640909 SPON1Q9HCB6 807 aa22.07■■□□□ 1.12
KCNC1-213ENST00000640909 PPP1R1BQ9UD71 204 aaPredicted RBP22.07■■□□□ 1.12
KCNC1-213ENST00000640909 APBA3O96018 575 aa22.06■■□□□ 1.12
KCNC1-213ENST00000640909 SPATA31A1Q5TZJ5 1347 aa22.06■■□□□ 1.12
KCNC1-213ENST00000640909 GPRASP1Q5JY77 1395 aa22.05■■□□□ 1.12
KCNC1-213ENST00000640909 RGPD3A6NKT7 1758 aaPredicted RBP22.04■■□□□ 1.12
KCNC1-213ENST00000640909 RGPD4Q7Z3J3 1758 aa22.04■■□□□ 1.12
KCNC1-213ENST00000640909 DLC1Q96QB1 1528 aa22.04■■□□□ 1.12
KCNC1-213ENST00000640909 EIF3AQ14152 1382 aaKnown RBP22.03■■□□□ 1.12
KCNC1-213ENST00000640909 KCNQ2O43526 872 aa22.03■■□□□ 1.12
KCNC1-213ENST00000640909 DHX57Q6P158 1386 aaKnown RBP22.02■■□□□ 1.12
KCNC1-213ENST00000640909 PMFBP1Q8TBY8 1022 aa22.01■■□□□ 1.11
KCNC1-213ENST00000640909 PRDM11Q9NQV5 511 aa22.01■■□□□ 1.11
KCNC1-213ENST00000640909 CAMTA1Q9Y6Y1 1673 aa22■■□□□ 1.11
KCNC1-213ENST00000640909 PHRF1Q9P1Y6 1649 aaKnown RBP21.99■■□□□ 1.11
KCNC1-213ENST00000640909 RGL3Q3MIN7 710 aa21.99■■□□□ 1.11
KCNC1-213ENST00000640909 C14orf93Q9H972 538 aaKnown RBP21.99■■□□□ 1.11
KCNC1-213ENST00000640909 ACIN1Q9UKV3 1341 aaKnown RBP21.99■■□□□ 1.11
KCNC1-213ENST00000640909 TULP4Q9NRJ4 1543 aa21.98■■□□□ 1.11
KCNC1-213ENST00000640909 BARGINQ6ZT62 677 aa21.98■■□□□ 1.11
KCNC1-213ENST00000640909 PRAM1Q96QH2 718 aa21.97■■□□□ 1.11
KCNC1-213ENST00000640909 C11orf95C9JLR9 678 aaPredicted RBP21.96■■□□□ 1.11
KCNC1-213ENST00000640909 CASZ1Q86V15 1759 aa21.96■■□□□ 1.11
KCNC1-213ENST00000640909 PDE3BQ13370 1112 aa21.95■■□□□ 1.1
KCNC1-213ENST00000640909 KIAA0232Q92628 1395 aa21.95■■□□□ 1.1
KCNC1-213ENST00000640909 UTRNP46939 3433 aa21.94■■□□□ 1.1
KCNC1-213ENST00000640909 ZNF784Q8NCA9 323 aaPredicted RBP21.94■■□□□ 1.1
KCNC1-213ENST00000640909 ATP7BP35670 1465 aa21.94■■□□□ 1.1
KCNC1-213ENST00000640909 ITSN1Q15811 1721 aa21.94■■□□□ 1.1
KCNC1-213ENST00000640909 PARP4Q9UKK3 1724 aaKnown RBP21.94■■□□□ 1.1
KCNC1-213ENST00000640909 NRKQ7Z2Y5 1582 aa21.93■■□□□ 1.1
KCNC1-213ENST00000640909 SSH2Q76I76 1423 aa21.92■■□□□ 1.1
KCNC1-213ENST00000640909 IFFO2Q5TF58 517 aa21.91■■□□□ 1.1
KCNC1-213ENST00000640909 POGKQ9P215 609 aa21.91■■□□□ 1.1
KCNC1-213ENST00000640909 SAFB2Q14151 953 aaKnown RBP eCLIP21.9■■□□□ 1.1
KCNC1-213ENST00000640909 CHD4Q14839 1912 aa21.89■■□□□ 1.09
KCNC1-213ENST00000640909 STRN4Q9NRL3 753 aa21.89■■□□□ 1.09
KCNC1-213ENST00000640909 THRAP3Q9Y2W1 955 aaKnown RBP21.88■■□□□ 1.09
KCNC1-213ENST00000640909 MYOM1P52179 1685 aa21.88■■□□□ 1.09
KCNC1-213ENST00000640909 LMO7Q8WWI1 1683 aa21.88■■□□□ 1.09
KCNC1-213ENST00000640909 PRR36Q9H6K5 1346 aa21.87■■□□□ 1.09
KCNC1-213ENST00000640909 SENP3-EIF4A1A0A087X0R7 540 aa21.87■■□□□ 1.09
KCNC1-213ENST00000640909 CFAP70Q5T0N1 1121 aa21.87■■□□□ 1.09
KCNC1-213ENST00000640909 ADGRB1O14514 1584 aa21.87■■□□□ 1.09
KCNC1-213ENST00000640909 PEAK1Q9H792 1746 aa21.86■■□□□ 1.09
KCNC1-213ENST00000640909 PAK3O75914 559 aaPredicted RBP21.86■■□□□ 1.09
KCNC1-213ENST00000640909 TCP11L2Q8N4U5 519 aa21.86■■□□□ 1.09
KCNC1-213ENST00000640909 NGDNQ8NEJ9 315 aaKnown RBP21.86■■□□□ 1.09
KCNC1-213ENST00000640909 PLSCR1O15162 318 aa21.85■■□□□ 1.09
KCNC1-213ENST00000640909 CHRNA2Q15822 529 aa21.85■■□□□ 1.09
KCNC1-213ENST00000640909 USP35Q9P2H5 1018 aa21.85■■□□□ 1.09
KCNC1-213ENST00000640909 OVOS2A0A0G2JMS6 1433 aa21.85■■□□□ 1.09
KCNC1-213ENST00000640909 OVOS2A0A0J9YW53 1432 aa21.85■■□□□ 1.09
KCNC1-213ENST00000640909 OVOS2Q6IE36 1432 aa21.85■■□□□ 1.09
KCNC1-213ENST00000640909 SBF2Q86WG5 1849 aa21.85■■□□□ 1.09
KCNC1-213ENST00000640909 C1QTNF8P60827 252 aa21.84■■□□□ 1.09
KCNC1-213ENST00000640909 EVA1CP58658 441 aa21.83■■□□□ 1.09
KCNC1-213ENST00000640909 CPDO75976 1380 aa21.83■■□□□ 1.08
KCNC1-213ENST00000640909 WASLO00401 505 aaPredicted RBP21.82■■□□□ 1.08
KCNC1-213ENST00000640909 HIRIP3Q9BW71 556 aaPredicted RBP21.8■■□□□ 1.08
KCNC1-213ENST00000640909 ZC3H6P61129 1189 aaKnown RBP21.79■■□□□ 1.08
KCNC1-213ENST00000640909 LRRC37A3O60309 1634 aa21.79■■□□□ 1.08
KCNC1-213ENST00000640909 LARP1Q6PKG0 1096 aaKnown RBP21.78■■□□□ 1.08
KCNC1-213ENST00000640909 MPHOSPH9Q99550 1183 aa21.78■■□□□ 1.08
KCNC1-213ENST00000640909 ANO8Q9HCE9 1232 aaPredicted RBP21.78■■□□□ 1.08
KCNC1-213ENST00000640909 TOPAZ1Q8N9V7 1692 aa21.77■■□□□ 1.08
KCNC1-213ENST00000640909 PTGER2P43116 358 aa21.77■■□□□ 1.08
KCNC1-213ENST00000640909 MINK1Q8N4C8 1332 aaPredicted RBP21.77■■□□□ 1.07
KCNC1-213ENST00000640909 COL5A2P05997 1499 aaPredicted RBP21.77■■□□□ 1.07
KCNC1-213ENST00000640909 POLR3AO14802 1390 aaPredicted RBP21.75■■□□□ 1.07
KCNC1-213ENST00000640909 BCL9O00512 1426 aa21.75■■□□□ 1.07
KCNC1-213ENST00000640909 CRB1P82279 1406 aa21.74■■□□□ 1.07
KCNC1-213ENST00000640909 SYT17Q9BSW7 474 aa21.74■■□□□ 1.07
KCNC1-213ENST00000640909 TRAK1Q9UPV9 953 aa21.74■■□□□ 1.07
KCNC1-213ENST00000640909 BCL11BQ9C0K0 894 aaPredicted RBP21.73■■□□□ 1.07
KCNC1-213ENST00000640909 USP19O94966 1318 aa21.73■■□□□ 1.07
KCNC1-213ENST00000640909 WNK3Q9BYP7 1800 aa21.73■■□□□ 1.07
KCNC1-213ENST00000640909 ARHGEF28Q8N1W1 1705 aaKnown RBP21.72■■□□□ 1.07
KCNC1-213ENST00000640909 ZBTB7AO95365 584 aa21.72■■□□□ 1.07
KCNC1-213ENST00000640909 PPARGC1BQ86YN6 1023 aaKnown RBP21.72■■□□□ 1.07
KCNC1-213ENST00000640909 FHDC1Q9C0D6 1143 aaPredicted RBP21.72■■□□□ 1.07
KCNC1-213ENST00000640909 MAP3K5Q99683 1374 aa21.72■■□□□ 1.07
KCNC1-213ENST00000640909 AKAP12Q02952 1782 aa21.71■■□□□ 1.07
KCNC1-213ENST00000640909 NUDT16Q96DE0 195 aaKnown RBP21.7■■□□□ 1.06
KCNC1-213ENST00000640909 AATKQ6ZMQ8 1374 aa21.7■■□□□ 1.06
KCNC1-213ENST00000640909 PDGFDQ9GZP0 370 aaPredicted RBP21.69■■□□□ 1.06
KCNC1-213ENST00000640909 MTFR1LQ9H019 292 aa21.69■■□□□ 1.06
KCNC1-213ENST00000640909 DDB1Q16531 1140 aa21.67■■□□□ 1.06
KCNC1-213ENST00000640909 NUTM2GQ5VZR2 741 aa21.67■■□□□ 1.06
KCNC1-213ENST00000640909 SGIP1Q9BQI5 828 aa21.67■■□□□ 1.06
KCNC1-213ENST00000640909 PROM2Q8N271 834 aa21.66■■□□□ 1.06
KCNC1-213ENST00000640909 STK32BQ9NY57 414 aa21.66■■□□□ 1.06
KCNC1-213ENST00000640909 ACEP12821 1306 aa21.65■■□□□ 1.06
KCNC1-213ENST00000640909 GIGYF1O75420 1035 aaPredicted RBP21.65■■□□□ 1.06
KCNC1-213ENST00000640909 SLC15A2Q16348 729 aa21.65■■□□□ 1.06
KCNC1-213ENST00000640909 ABTB2Q8N961 1025 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms