RNA–Protein interactions for RNA: ENST00000601607.5

LINC00343-209, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 590 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-209ENST00000601607 MSS51Q4VC12 460 aa13□□□□□ -0.33
LINC00343-209ENST00000601607 TRIM67Q6ZTA4 783 aa13□□□□□ -0.33
LINC00343-209ENST00000601607 PCDHB15Q9Y5E8 787 aa13□□□□□ -0.33
LINC00343-209ENST00000601607 MAGI1Q96QZ7 1491 aaPredicted RBP12.99□□□□□ -0.33
LINC00343-209ENST00000601607 CSPP1Q1MSJ5 1256 aa12.99□□□□□ -0.33
LINC00343-209ENST00000601607 POLR3EQ9NVU0 708 aa12.99□□□□□ -0.33
LINC00343-209ENST00000601607 LIMD1Q9UGP4 676 aa12.99□□□□□ -0.33
LINC00343-209ENST00000601607 ZNF697Q5TEC3 545 aa12.98□□□□□ -0.33
LINC00343-209ENST00000601607 SYNJ2O15056 1496 aa12.97□□□□□ -0.33
LINC00343-209ENST00000601607 PKDCCQ504Y2 493 aa12.97□□□□□ -0.33
LINC00343-209ENST00000601607 RETREG3Q86VR2 466 aa12.97□□□□□ -0.33
LINC00343-209ENST00000601607 IL27Q8NEV9 243 aa12.97□□□□□ -0.33
LINC00343-209ENST00000601607 DGAT1O75907 488 aa12.96□□□□□ -0.33
LINC00343-209ENST00000601607 CLK2P49760 499 aaKnown RBP12.96□□□□□ -0.33
LINC00343-209ENST00000601607 MTMR2Q13614 643 aa12.96□□□□□ -0.33
LINC00343-209ENST00000601607 LIAT1Q6ZQX7 453 aa12.96□□□□□ -0.33
LINC00343-209ENST00000601607 GRIN2BQ13224 1484 aa12.95□□□□□ -0.34
LINC00343-209ENST00000601607 SH3D19Q5HYK7 790 aa12.94□□□□□ -0.34
LINC00343-209ENST00000601607 ZNF787Q6DD87 383 aa12.94□□□□□ -0.34
LINC00343-209ENST00000601607 CABLES1Q8TDN4 633 aa12.93□□□□□ -0.34
LINC00343-209ENST00000601607 ZBTB3Q9H5J0 574 aa12.93□□□□□ -0.34
LINC00343-209ENST00000601607 SPDYE5A6NIY4 337 aa12.92□□□□□ -0.34
LINC00343-209ENST00000601607 HRCP23327 699 aa12.92□□□□□ -0.34
LINC00343-209ENST00000601607 MMP16P51512 607 aa12.92□□□□□ -0.34
LINC00343-209ENST00000601607 SKIV2LQ15477 1246 aaKnown RBP12.92□□□□□ -0.34
LINC00343-209ENST00000601607 ERCC6L2Q5T890 1561 aa12.92□□□□□ -0.34
LINC00343-209ENST00000601607 ATP1B4Q9UN42 357 aaPredicted RBP12.92□□□□□ -0.34
LINC00343-209ENST00000601607 FCF1Q9Y324 198 aaKnown RBP12.92□□□□□ -0.34
LINC00343-209ENST00000601607 FGD5Q6ZNL6 1462 aa12.91□□□□□ -0.34
LINC00343-209ENST00000601607 DXOO77932 396 aaKnown RBP12.91□□□□□ -0.34
LINC00343-209ENST00000601607 QPCTQ16769 361 aa12.91□□□□□ -0.34
LINC00343-209ENST00000601607 PRPF38BQ5VTL8 546 aaKnown RBP12.91□□□□□ -0.34
LINC00343-209ENST00000601607 PRR7Q8TB68 274 aa12.91□□□□□ -0.34
LINC00343-209ENST00000601607 NUTM2BA6NNL0 878 aaPredicted RBP12.9□□□□□ -0.34
LINC00343-209ENST00000601607 NUTM2EB1AL46 878 aaPredicted RBP12.9□□□□□ -0.34
LINC00343-209ENST00000601607 GDF9O60383 454 aa12.9□□□□□ -0.34
LINC00343-209ENST00000601607 TUSC1Q2TAM9 212 aa12.9□□□□□ -0.34
LINC00343-209ENST00000601607 NUTM2DQ5VT03 806 aaPredicted RBP12.9□□□□□ -0.34
LINC00343-209ENST00000601607 NUTM2AQ8IVF1 878 aaPredicted RBP12.9□□□□□ -0.34
LINC00343-209ENST00000601607 WDR97A6NE52 1622 aa12.9□□□□□ -0.34
LINC00343-209ENST00000601607 JUNDP17535 347 aa12.89□□□□□ -0.35
LINC00343-209ENST00000601607 PLA2G2CQ5R387 149 aa12.89□□□□□ -0.35
LINC00343-209ENST00000601607 RPIAP49247 311 aa12.88□□□□□ -0.35
LINC00343-209ENST00000601607 PROCA1Q8NCQ7 364 aaPredicted RBP12.88□□□□□ -0.35
LINC00343-209ENST00000601607 CFAP99D6REC4 459 aa12.87□□□□□ -0.35
LINC00343-209ENST00000601607 LILRB3O75022 631 aa12.87□□□□□ -0.35
LINC00343-209ENST00000601607 MYT1Q01538 1121 aa12.87□□□□□ -0.35
LINC00343-209ENST00000601607 FAM187AA6NFU0 413 aa12.86□□□□□ -0.35
LINC00343-209ENST00000601607 TNFRSF10AO00220 468 aa12.86□□□□□ -0.35
LINC00343-209ENST00000601607 CCDC24Q8N4L8 307 aa12.85□□□□□ -0.35
LINC00343-209ENST00000601607 RTL5Q5HYW3 569 aaPredicted RBP12.84□□□□□ -0.35
LINC00343-209ENST00000601607 CD2BP2O95400 341 aaKnown RBP12.83□□□□□ -0.36
LINC00343-209ENST00000601607 TSC1Q92574 1164 aa12.83□□□□□ -0.36
LINC00343-209ENST00000601607 FAM69CQ0P6D2 419 aa12.82□□□□□ -0.36
LINC00343-209ENST00000601607 DESI1Q6ICB0 168 aa12.82□□□□□ -0.36
LINC00343-209ENST00000601607 PCMTD1Q96MG8 357 aaPredicted RBP12.82□□□□□ -0.36
LINC00343-209ENST00000601607 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.82□□□□□ -0.36
LINC00343-209ENST00000601607 GOPCQ9HD26 462 aa12.82□□□□□ -0.36
LINC00343-209ENST00000601607 CEP170Q5SW79 1584 aa12.81□□□□□ -0.36
LINC00343-209ENST00000601607 NUDT12Q9BQG2 462 aa12.81□□□□□ -0.36
LINC00343-209ENST00000601607 CUX1P39880 1505 aa12.81□□□□□ -0.36
LINC00343-209ENST00000601607 KIF13AQ9H1H9 1805 aa12.81□□□□□ -0.36
LINC00343-209ENST00000601607 PTPRNQ16849 979 aa12.79□□□□□ -0.36
LINC00343-209ENST00000601607 FBXO31Q5XUX0 539 aaPredicted RBP12.79□□□□□ -0.36
LINC00343-209ENST00000601607 PKD2L1Q9P0L9 805 aa12.79□□□□□ -0.36
LINC00343-209ENST00000601607 GRIN2AQ12879 1464 aa12.78□□□□□ -0.36
LINC00343-209ENST00000601607 ZBTB24O43167 697 aaPredicted RBP12.78□□□□□ -0.36
LINC00343-209ENST00000601607 CCNYL3P0C7X3 344 aa12.78□□□□□ -0.36
LINC00343-209ENST00000601607 FOXC1Q12948 553 aa12.78□□□□□ -0.36
LINC00343-209ENST00000601607 NUP160Q12769 1436 aa12.78□□□□□ -0.36
LINC00343-209ENST00000601607 ABCC10Q5T3U5 1492 aa12.78□□□□□ -0.36
LINC00343-209ENST00000601607 LYPD8Q6UX82 237 aa12.77□□□□□ -0.37
LINC00343-209ENST00000601607 HELBQ8NG08 1087 aaPredicted RBP12.76□□□□□ -0.37
LINC00343-209ENST00000601607 PBRM1Q86U86 1689 aa12.76□□□□□ -0.37
LINC00343-209ENST00000601607 PPP2R2DQ66LE6 453 aa12.75□□□□□ -0.37
LINC00343-209ENST00000601607 ZNF775Q96BV0 537 aaPredicted RBP12.75□□□□□ -0.37
LINC00343-209ENST00000601607 PER1O15534 1290 aaPredicted RBP12.74□□□□□ -0.37
LINC00343-209ENST00000601607 PTCRAQ6ISU1 281 aaPredicted RBP12.73□□□□□ -0.37
LINC00343-209ENST00000601607 EVA1BQ9NVM1 165 aa12.73□□□□□ -0.37
LINC00343-209ENST00000601607 KDM6BO15054 1643 aa12.73□□□□□ -0.37
LINC00343-209ENST00000601607 CTHP32929 405 aa12.72□□□□□ -0.37
LINC00343-209ENST00000601607 TRIM32Q13049 653 aa12.72□□□□□ -0.37
LINC00343-209ENST00000601607 CYP4X1Q8N118 509 aa12.72□□□□□ -0.37
LINC00343-209ENST00000601607 CRIPAKQ8N1N5 446 aa12.72□□□□□ -0.37
LINC00343-209ENST00000601607 ABCA5Q8WWZ7 1642 aa12.72□□□□□ -0.37
LINC00343-209ENST00000601607 ABCA10Q8WWZ4 1543 aa12.72□□□□□ -0.37
LINC00343-209ENST00000601607 PRG4Q92954 1404 aaPredicted RBP12.71□□□□□ -0.37
LINC00343-209ENST00000601607 SHROOM2Q13796 1616 aa12.71□□□□□ -0.37
LINC00343-209ENST00000601607 CTDSPL2Q05D32 466 aa12.71□□□□□ -0.37
LINC00343-209ENST00000601607 KCNH2Q12809 1159 aa12.71□□□□□ -0.37
LINC00343-209ENST00000601607 AAASQ9NRG9 546 aa12.71□□□□□ -0.37
LINC00343-209ENST00000601607 TOR4AQ9NXH8 423 aa12.71□□□□□ -0.37
LINC00343-209ENST00000601607 DIP2BQ9P265 1576 aa12.7□□□□□ -0.38
LINC00343-209ENST00000601607 AP1G2O75843 785 aa12.69□□□□□ -0.38
LINC00343-209ENST00000601607 AVPP01185 164 aa12.69□□□□□ -0.38
LINC00343-209ENST00000601607 RFC5P40937 340 aa12.69□□□□□ -0.38
LINC00343-209ENST00000601607 ADAMTS12P58397 1594 aa12.69□□□□□ -0.38
LINC00343-209ENST00000601607 MAPKBP1O60336 1514 aa12.68□□□□□ -0.38
LINC00343-209ENST00000601607 CTC1Q2NKJ3 1217 aa12.68□□□□□ -0.38
LINC00343-209ENST00000601607 UNC93B1Q9H1C4 597 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms