RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 DHX57Q6P158 1386 aaKnown RBP16.67■□□□□ 0.26
CASC3-208ENST00000583649 PMFBP1Q8TBY8 1022 aa16.67■□□□□ 0.26
CASC3-208ENST00000583649 ANKARQ7Z5J8 1434 aa16.66■□□□□ 0.26
CASC3-208ENST00000583649 NRAPQ86VF7 1730 aa16.66■□□□□ 0.26
CASC3-208ENST00000583649 ABCA3Q99758 1704 aa16.66■□□□□ 0.26
CASC3-208ENST00000583649 POGKQ9P215 609 aa16.66■□□□□ 0.26
CASC3-208ENST00000583649 TNS1Q9HBL0 1735 aaKnown RBP16.65■□□□□ 0.26
CASC3-208ENST00000583649 EVA1CP58658 441 aa16.65■□□□□ 0.26
CASC3-208ENST00000583649 SPATA31A1Q5TZJ5 1347 aa16.65■□□□□ 0.26
CASC3-208ENST00000583649 SENP3-EIF4A1A0A087X0R7 540 aa16.64■□□□□ 0.25
CASC3-208ENST00000583649 PAK3O75914 559 aaPredicted RBP16.64■□□□□ 0.25
CASC3-208ENST00000583649 IFT172Q9UG01 1749 aa16.63■□□□□ 0.25
CASC3-208ENST00000583649 STRN4Q9NRL3 753 aa16.63■□□□□ 0.25
CASC3-208ENST00000583649 THSD7AQ9UPZ6 1657 aa16.62■□□□□ 0.25
CASC3-208ENST00000583649 NGDNQ8NEJ9 315 aaKnown RBP16.62■□□□□ 0.25
CASC3-208ENST00000583649 PRAM1Q96QH2 718 aa16.62■□□□□ 0.25
CASC3-208ENST00000583649 PIK3C2GO75747 1445 aa16.62■□□□□ 0.25
CASC3-208ENST00000583649 SAFB2Q14151 953 aaKnown RBP eCLIP16.61■□□□□ 0.25
CASC3-208ENST00000583649 IFFO2Q5TF58 517 aa16.61■□□□□ 0.25
CASC3-208ENST00000583649 BARGINQ6ZT62 677 aa16.61■□□□□ 0.25
CASC3-208ENST00000583649 ZNF784Q8NCA9 323 aaPredicted RBP16.6■□□□□ 0.25
CASC3-208ENST00000583649 C14orf93Q9H972 538 aaKnown RBP16.6■□□□□ 0.25
CASC3-208ENST00000583649 USP35Q9P2H5 1018 aa16.6■□□□□ 0.25
CASC3-208ENST00000583649 ACIN1Q9UKV3 1341 aaKnown RBP16.6■□□□□ 0.25
CASC3-208ENST00000583649 RGPD8O14715 1765 aaPredicted RBP16.59■□□□□ 0.25
CASC3-208ENST00000583649 THRAP3Q9Y2W1 955 aaKnown RBP16.57■□□□□ 0.24
CASC3-208ENST00000583649 KIAA0232Q92628 1395 aa16.56■□□□□ 0.24
CASC3-208ENST00000583649 C1QTNF8P60827 252 aa16.56■□□□□ 0.24
CASC3-208ENST00000583649 TCP11L2Q8N4U5 519 aa16.56■□□□□ 0.24
CASC3-208ENST00000583649 RREB1Q92766 1687 aa16.56■□□□□ 0.24
CASC3-208ENST00000583649 SPATA31E1Q6ZUB1 1445 aa16.55■□□□□ 0.24
CASC3-208ENST00000583649 CHRNA2Q15822 529 aa16.54■□□□□ 0.24
CASC3-208ENST00000583649 NUP188Q5SRE5 1749 aa16.53■□□□□ 0.24
CASC3-208ENST00000583649 ALS2Q96Q42 1657 aa16.53■□□□□ 0.24
CASC3-208ENST00000583649 PLSCR1O15162 318 aa16.53■□□□□ 0.24
CASC3-208ENST00000583649 CFAP70Q5T0N1 1121 aa16.53■□□□□ 0.24
CASC3-208ENST00000583649 TRPM3Q9HCF6 1732 aaPredicted RBP16.53■□□□□ 0.24
CASC3-208ENST00000583649 ZC3H6P61129 1189 aaKnown RBP16.52■□□□□ 0.24
CASC3-208ENST00000583649 HIRIP3Q9BW71 556 aaPredicted RBP16.51■□□□□ 0.23
CASC3-208ENST00000583649 BCL11BQ9C0K0 894 aaPredicted RBP16.51■□□□□ 0.23
CASC3-208ENST00000583649 SSH2Q76I76 1423 aa16.51■□□□□ 0.23
CASC3-208ENST00000583649 DLC1Q96QB1 1528 aa16.5■□□□□ 0.23
CASC3-208ENST00000583649 WASLO00401 505 aaPredicted RBP16.5■□□□□ 0.23
CASC3-208ENST00000583649 TULP4Q9NRJ4 1543 aa16.49■□□□□ 0.23
CASC3-208ENST00000583649 ATP7BP35670 1465 aa16.48■□□□□ 0.23
CASC3-208ENST00000583649 MINK1Q8N4C8 1332 aaPredicted RBP16.48■□□□□ 0.23
CASC3-208ENST00000583649 OVOS2A0A0G2JMS6 1433 aa16.48■□□□□ 0.23
CASC3-208ENST00000583649 OVOS2A0A0J9YW53 1432 aa16.48■□□□□ 0.23
CASC3-208ENST00000583649 OVOS2Q6IE36 1432 aa16.48■□□□□ 0.23
CASC3-208ENST00000583649 ZBTB7AO95365 584 aa16.47■□□□□ 0.23
CASC3-208ENST00000583649 LARP1Q6PKG0 1096 aaKnown RBP16.47■□□□□ 0.23
CASC3-208ENST00000583649 PPARGC1BQ86YN6 1023 aaKnown RBP16.47■□□□□ 0.23
CASC3-208ENST00000583649 MPHOSPH9Q99550 1183 aa16.47■□□□□ 0.23
CASC3-208ENST00000583649 STK32BQ9NY57 414 aa16.47■□□□□ 0.23
CASC3-208ENST00000583649 TRAK1Q9UPV9 953 aa16.47■□□□□ 0.23
CASC3-208ENST00000583649 GIGYF1O75420 1035 aaPredicted RBP16.46■□□□□ 0.23
CASC3-208ENST00000583649 SYT17Q9BSW7 474 aa16.45■□□□□ 0.22
CASC3-208ENST00000583649 PRR36Q9H6K5 1346 aa16.45■□□□□ 0.22
CASC3-208ENST00000583649 CAMTA1Q9Y6Y1 1673 aa16.44■□□□□ 0.22
CASC3-208ENST00000583649 NRKQ7Z2Y5 1582 aa16.44■□□□□ 0.22
CASC3-208ENST00000583649 DDB1Q16531 1140 aa16.44■□□□□ 0.22
CASC3-208ENST00000583649 ABTB2Q8N961 1025 aa16.44■□□□□ 0.22
CASC3-208ENST00000583649 FHDC1Q9C0D6 1143 aaPredicted RBP16.44■□□□□ 0.22
CASC3-208ENST00000583649 ATF5Q9Y2D1 282 aaPredicted RBP16.44■□□□□ 0.22
CASC3-208ENST00000583649 NUTM2GQ5VZR2 741 aa16.43■□□□□ 0.22
CASC3-208ENST00000583649 MTFR1LQ9H019 292 aa16.43■□□□□ 0.22
CASC3-208ENST00000583649 RGPD3A6NKT7 1758 aaPredicted RBP16.43■□□□□ 0.22
CASC3-208ENST00000583649 RGPD4Q7Z3J3 1758 aa16.43■□□□□ 0.22
CASC3-208ENST00000583649 CRYBG1Q9Y4K1 1723 aa16.42■□□□□ 0.22
CASC3-208ENST00000583649 CPDO75976 1380 aa16.42■□□□□ 0.22
CASC3-208ENST00000583649 NLRP13Q86W25 1043 aa16.42■□□□□ 0.22
CASC3-208ENST00000583649 NUDT16Q96DE0 195 aaKnown RBP16.42■□□□□ 0.22
CASC3-208ENST00000583649 PTGER2P43116 358 aa16.41■□□□□ 0.22
CASC3-208ENST00000583649 CDCA7Q9BWT1 371 aaPredicted RBP16.41■□□□□ 0.22
CASC3-208ENST00000583649 CRB1P82279 1406 aa16.4■□□□□ 0.22
CASC3-208ENST00000583649 GPR162Q16538 588 aa16.4■□□□□ 0.22
CASC3-208ENST00000583649 ANO8Q9HCE9 1232 aaPredicted RBP16.4■□□□□ 0.22
CASC3-208ENST00000583649 PHRF1Q9P1Y6 1649 aaKnown RBP16.4■□□□□ 0.22
CASC3-208ENST00000583649 ITSN1Q15811 1721 aa16.39■□□□□ 0.21
CASC3-208ENST00000583649 SLC15A2Q16348 729 aa16.39■□□□□ 0.21
CASC3-208ENST00000583649 STAC3Q96MF2 364 aa16.38■□□□□ 0.21
CASC3-208ENST00000583649 ARXQ96QS3 562 aa16.38■□□□□ 0.21
CASC3-208ENST00000583649 CCDC61Q9Y6R9 512 aa16.38■□□□□ 0.21
CASC3-208ENST00000583649 PARP4Q9UKK3 1724 aaKnown RBP16.38■□□□□ 0.21
CASC3-208ENST00000583649 CHD4Q14839 1912 aa16.37■□□□□ 0.21
CASC3-208ENST00000583649 CASZ1Q86V15 1759 aa16.37■□□□□ 0.21
CASC3-208ENST00000583649 GCP02774 474 aa16.37■□□□□ 0.21
CASC3-208ENST00000583649 TOM1L2Q6ZVM7 507 aa16.37■□□□□ 0.21
CASC3-208ENST00000583649 MYOM1P52179 1685 aa16.37■□□□□ 0.21
CASC3-208ENST00000583649 TXNRD1Q16881 649 aa16.36■□□□□ 0.21
CASC3-208ENST00000583649 ACEP12821 1306 aa16.36■□□□□ 0.21
CASC3-208ENST00000583649 ZBTB7CA1YPR0 619 aa16.35■□□□□ 0.21
CASC3-208ENST00000583649 PDGFDQ9GZP0 370 aaPredicted RBP16.35■□□□□ 0.21
CASC3-208ENST00000583649 POLR3AO14802 1390 aaPredicted RBP16.35■□□□□ 0.21
CASC3-208ENST00000583649 COL5A2P05997 1499 aaPredicted RBP16.35■□□□□ 0.21
CASC3-208ENST00000583649 MAP3K5Q99683 1374 aa16.34■□□□□ 0.21
CASC3-208ENST00000583649 CDK19Q9BWU1 502 aa16.33■□□□□ 0.2
CASC3-208ENST00000583649 USP19O94966 1318 aa16.33■□□□□ 0.2
CASC3-208ENST00000583649 BCL9O00512 1426 aa16.33■□□□□ 0.2
CASC3-208ENST00000583649 PLEKHG3A1L390 1219 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms