RNA–Protein interactions for RNA: ENST00000581733.1

TVP23B-209, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5 BASIC

Gene TVP23B, Length 1,258 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-209ENST00000581733 TOPBP1Q92547 1522 aa10.39□□□□□ -0.75
TVP23B-209ENST00000581733 CAPN5O15484 640 aaPredicted RBP10.39□□□□□ -0.75
TVP23B-209ENST00000581733 HLA-CQ95604 372 aa10.39□□□□□ -0.75
TVP23B-209ENST00000581733 FGD5Q6ZNL6 1462 aa10.38□□□□□ -0.75
TVP23B-209ENST00000581733 H3BM21 787 aa10.38□□□□□ -0.75
TVP23B-209ENST00000581733 TESPA1A2RU30 521 aaPredicted RBP10.37□□□□□ -0.75
TVP23B-209ENST00000581733 NPAS3Q8IXF0 933 aa10.37□□□□□ -0.75
TVP23B-209ENST00000581733 WASF2Q9Y6W5 498 aa10.37□□□□□ -0.75
TVP23B-209ENST00000581733 GOLGA3Q08378 1498 aa10.36□□□□□ -0.75
TVP23B-209ENST00000581733 KDM4AO75164 1064 aa10.36□□□□□ -0.75
TVP23B-209ENST00000581733 CD46P15529 392 aa10.36□□□□□ -0.75
TVP23B-209ENST00000581733 SMYD5Q6GMV2 418 aa10.36□□□□□ -0.75
TVP23B-209ENST00000581733 EHBP1Q8NDI1 1231 aa10.36□□□□□ -0.75
TVP23B-209ENST00000581733 KIF27Q86VH2 1401 aa10.35□□□□□ -0.75
TVP23B-209ENST00000581733 URB2Q14146 1524 aaKnown RBP10.35□□□□□ -0.75
TVP23B-209ENST00000581733 ERICH3Q5RHP9 1530 aa10.35□□□□□ -0.75
TVP23B-209ENST00000581733 RUSC2Q8N2Y8 1516 aa10.35□□□□□ -0.75
TVP23B-209ENST00000581733 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.35□□□□□ -0.75
TVP23B-209ENST00000581733 LOC105371045A0A1W2PR82 267 aa10.34□□□□□ -0.75
TVP23B-209ENST00000581733 MRC2Q9UBG0 1479 aa10.34□□□□□ -0.75
TVP23B-209ENST00000581733 SIAH2O43255 324 aa10.33□□□□□ -0.76
TVP23B-209ENST00000581733 POLA1P09884 1462 aaPredicted RBP10.33□□□□□ -0.76
TVP23B-209ENST00000581733 CUL7Q14999 1698 aa10.32□□□□□ -0.76
TVP23B-209ENST00000581733 TULP1O00294 542 aaPredicted RBP10.32□□□□□ -0.76
TVP23B-209ENST00000581733 ZFP42Q96MM3 310 aa10.32□□□□□ -0.76
TVP23B-209ENST00000581733 ABCA10Q8WWZ4 1543 aa10.32□□□□□ -0.76
TVP23B-209ENST00000581733 JUNDP17535 347 aa10.31□□□□□ -0.76
TVP23B-209ENST00000581733 PTCRAQ6ISU1 281 aaPredicted RBP10.31□□□□□ -0.76
TVP23B-209ENST00000581733 SYMPKQ92797 1274 aaKnown RBP10.31□□□□□ -0.76
TVP23B-209ENST00000581733 CUX2O14529 1486 aa10.3□□□□□ -0.76
TVP23B-209ENST00000581733 WDR62O43379 1518 aa10.3□□□□□ -0.76
TVP23B-209ENST00000581733 GUCA2AQ02747 115 aa10.3□□□□□ -0.76
TVP23B-209ENST00000581733 SUZ12Q15022 739 aaKnown RBP10.3□□□□□ -0.76
TVP23B-209ENST00000581733 PBRM1Q86U86 1689 aa10.3□□□□□ -0.76
TVP23B-209ENST00000581733 THOC2Q8NI27 1593 aaKnown RBP10.3□□□□□ -0.76
TVP23B-209ENST00000581733 NUDT12Q9BQG2 462 aa10.29□□□□□ -0.76
TVP23B-209ENST00000581733 ERCC6Q03468 1493 aa10.29□□□□□ -0.76
TVP23B-209ENST00000581733 TARBP1Q13395 1621 aaKnown RBP10.29□□□□□ -0.76
TVP23B-209ENST00000581733 ABCA5Q8WWZ7 1642 aa10.29□□□□□ -0.76
TVP23B-209ENST00000581733 HOXA2O43364 376 aa10.28□□□□□ -0.76
TVP23B-209ENST00000581733 USP46P62068 366 aa10.28□□□□□ -0.76
TVP23B-209ENST00000581733 TNIKQ9UKE5 1360 aa10.27□□□□□ -0.76
TVP23B-209ENST00000581733 GPIHBP1Q8IV16 184 aa10.27□□□□□ -0.77
TVP23B-209ENST00000581733 CTTNBP2Q8WZ74 1663 aa10.26□□□□□ -0.77
TVP23B-209ENST00000581733 PRXQ9BXM0 1461 aa10.25□□□□□ -0.77
TVP23B-209ENST00000581733 SOBPA7XYQ1 873 aa10.25□□□□□ -0.77
TVP23B-209ENST00000581733 SH3BP2P78314 561 aa10.25□□□□□ -0.77
TVP23B-209ENST00000581733 TLL2Q9Y6L7 1015 aa10.25□□□□□ -0.77
TVP23B-209ENST00000581733 MDM2Q00987 491 aaPredicted RBP10.24□□□□□ -0.77
TVP23B-209ENST00000581733 RAD54L2Q9Y4B4 1467 aa10.23□□□□□ -0.77
TVP23B-209ENST00000581733 RAPGEF2Q9Y4G8 1499 aa10.23□□□□□ -0.77
TVP23B-209ENST00000581733 KCTD17Q8N5Z5 321 aa10.23□□□□□ -0.77
TVP23B-209ENST00000581733 CEP162Q5TB80 1403 aa10.23□□□□□ -0.77
TVP23B-209ENST00000581733 LINC01559Q495D7 138 aa10.22□□□□□ -0.77
TVP23B-209ENST00000581733 MRPL14Q6P1L8 145 aaKnown RBP10.22□□□□□ -0.77
TVP23B-209ENST00000581733 PURBQ96QR8 312 aaKnown RBP10.22□□□□□ -0.77
TVP23B-209ENST00000581733 UBTFP17480 764 aaKnown RBP10.21□□□□□ -0.77
TVP23B-209ENST00000581733 SCARF1Q14162 830 aa10.21□□□□□ -0.77
TVP23B-209ENST00000581733 RETREG3Q86VR2 466 aa10.21□□□□□ -0.77
TVP23B-209ENST00000581733 IFT140Q96RY7 1462 aa10.21□□□□□ -0.78
TVP23B-209ENST00000581733 NNTQ13423 1086 aa10.2□□□□□ -0.78
TVP23B-209ENST00000581733 GAPVD1Q14C86 1478 aa10.19□□□□□ -0.78
TVP23B-209ENST00000581733 CCNYL3P0C7X3 344 aa10.18□□□□□ -0.78
TVP23B-209ENST00000581733 VSIG8P0DPA2 414 aa10.18□□□□□ -0.78
TVP23B-209ENST00000581733 MS4A1P11836 297 aa10.17□□□□□ -0.78
TVP23B-209ENST00000581733 BAP1Q92560 729 aa10.17□□□□□ -0.78
TVP23B-209ENST00000581733 UNC93B1Q9H1C4 597 aa10.17□□□□□ -0.78
TVP23B-209ENST00000581733 EIF4G3O43432 1585 aaKnown RBP10.17□□□□□ -0.78
TVP23B-209ENST00000581733 IGF1RP08069 1367 aa10.16□□□□□ -0.78
TVP23B-209ENST00000581733 CARMIL1Q5VZK9 1371 aa10.16□□□□□ -0.78
TVP23B-209ENST00000581733 C6orf229H3BNL8 230 aa10.16□□□□□ -0.78
TVP23B-209ENST00000581733 WDR4P57081 412 aaKnown RBP10.16□□□□□ -0.78
TVP23B-209ENST00000581733 KCNMA1Q12791 1236 aa10.16□□□□□ -0.78
TVP23B-209ENST00000581733 MAP2K5Q13163 448 aa10.16□□□□□ -0.78
TVP23B-209ENST00000581733 NUTM1Q86Y26 1132 aa10.16□□□□□ -0.78
TVP23B-209ENST00000581733 ZC3H15Q8WU90 426 aaKnown RBP10.16□□□□□ -0.78
TVP23B-209ENST00000581733 CLIP1P30622 1438 aa10.16□□□□□ -0.78
TVP23B-209ENST00000581733 ADAMTS12P58397 1594 aa10.15□□□□□ -0.78
TVP23B-209ENST00000581733 PLEKHG3A1L390 1219 aa10.15□□□□□ -0.78
TVP23B-209ENST00000581733 TIMP2P16035 220 aa10.15□□□□□ -0.78
TVP23B-209ENST00000581733 GSK3AP49840 483 aa10.14□□□□□ -0.79
TVP23B-209ENST00000581733 GRIN2BQ13224 1484 aa10.13□□□□□ -0.79
TVP23B-209ENST00000581733 ADH1CP00326 375 aa10.13□□□□□ -0.79
TVP23B-209ENST00000581733 IRF6O14896 467 aa10.12□□□□□ -0.79
TVP23B-209ENST00000581733 MAN1A2O60476 641 aa10.12□□□□□ -0.79
TVP23B-209ENST00000581733 FDX1P10109 184 aa10.12□□□□□ -0.79
TVP23B-209ENST00000581733 VARSP26640 1264 aaKnown RBP10.12□□□□□ -0.79
TVP23B-209ENST00000581733 ZNF511Q8NB15 262 aa10.12□□□□□ -0.79
TVP23B-209ENST00000581733 PCDHGC3Q9UN70 934 aa10.12□□□□□ -0.79
TVP23B-209ENST00000581733 PTPRNQ16849 979 aa10.11□□□□□ -0.79
TVP23B-209ENST00000581733 C6orf118Q5T5N4 469 aa10.11□□□□□ -0.79
TVP23B-209ENST00000581733 TMEM151AQ8N4L1 468 aa10.11□□□□□ -0.79
TVP23B-209ENST00000581733 EVA1BQ9NVM1 165 aa10.11□□□□□ -0.79
TVP23B-209ENST00000581733 EFCAB5A4FU69 1503 aa10.1□□□□□ -0.79
TVP23B-209ENST00000581733 TDRD9Q8NDG6 1382 aaKnown RBP10.1□□□□□ -0.79
TVP23B-209ENST00000581733 PPFIA3O75145 1194 aa10.09□□□□□ -0.79
TVP23B-209ENST00000581733 ZMYND10O75800 440 aa10.09□□□□□ -0.79
TVP23B-209ENST00000581733 GDF11O95390 407 aa10.09□□□□□ -0.79
TVP23B-209ENST00000581733 KCNH2Q12809 1159 aa10.09□□□□□ -0.79
TVP23B-209ENST00000581733 FAM217BQ9NTX9 383 aaPredicted RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms