RNA–Protein interactions for RNA: ENST00000580991.1

IFT20-211, Transcript of intraflagellar transport 20, humanhuman

TSL 4

Gene IFT20, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-211ENST00000580991 ALS2Q96Q42 1657 aa21.95■■□□□ 1.1
IFT20-211ENST00000580991 YY1P25490 414 aa21.94■■□□□ 1.1
IFT20-211ENST00000580991 PARD3Q8TEW0 1356 aa21.94■■□□□ 1.1
IFT20-211ENST00000580991 CFAP70Q5T0N1 1121 aa21.93■■□□□ 1.1
IFT20-211ENST00000580991 FAM196AQ6ZSG2 479 aa21.93■■□□□ 1.1
IFT20-211ENST00000580991 POGKQ9P215 609 aa21.93■■□□□ 1.1
IFT20-211ENST00000580991 TRIM37O94972 964 aa21.92■■□□□ 1.1
IFT20-211ENST00000580991 PRDM11Q9NQV5 511 aa21.91■■□□□ 1.1
IFT20-211ENST00000580991 DLC1Q96QB1 1528 aa21.9■■□□□ 1.1
IFT20-211ENST00000580991 ACIN1Q9UKV3 1341 aaKnown RBP21.9■■□□□ 1.1
IFT20-211ENST00000580991 MPHOSPH9Q99550 1183 aa21.9■■□□□ 1.1
IFT20-211ENST00000580991 SPATA31A1Q5TZJ5 1347 aa21.89■■□□□ 1.1
IFT20-211ENST00000580991 APBA3O96018 575 aa21.89■■□□□ 1.09
IFT20-211ENST00000580991 EIF3AQ14152 1382 aaKnown RBP21.88■■□□□ 1.09
IFT20-211ENST00000580991 CRYBG1Q9Y4K1 1723 aa21.88■■□□□ 1.09
IFT20-211ENST00000580991 PAK3O75914 559 aaPredicted RBP21.85■■□□□ 1.09
IFT20-211ENST00000580991 NBPF8Q3BBV2 869 aa21.85■■□□□ 1.09
IFT20-211ENST00000580991 NBPF14Q5TI25 921 aa21.85■■□□□ 1.09
IFT20-211ENST00000580991 NGDNQ8NEJ9 315 aaKnown RBP21.85■■□□□ 1.09
IFT20-211ENST00000580991 HIRIP3Q9BW71 556 aaPredicted RBP21.85■■□□□ 1.09
IFT20-211ENST00000580991 RREB1Q92766 1687 aa21.84■■□□□ 1.09
IFT20-211ENST00000580991 KIAA0232Q92628 1395 aa21.84■■□□□ 1.09
IFT20-211ENST00000580991 PRR36Q9H6K5 1346 aa21.83■■□□□ 1.09
IFT20-211ENST00000580991 STRN4Q9NRL3 753 aa21.83■■□□□ 1.09
IFT20-211ENST00000580991 TULP4Q9NRJ4 1543 aa21.83■■□□□ 1.09
IFT20-211ENST00000580991 DCAF8L1A6NGE4 600 aa21.82■■□□□ 1.08
IFT20-211ENST00000580991 NUP188Q5SRE5 1749 aa21.81■■□□□ 1.08
IFT20-211ENST00000580991 WASLO00401 505 aaPredicted RBP21.81■■□□□ 1.08
IFT20-211ENST00000580991 PDE3BQ13370 1112 aa21.81■■□□□ 1.08
IFT20-211ENST00000580991 CHRNA2Q15822 529 aa21.81■■□□□ 1.08
IFT20-211ENST00000580991 PPP1R1BQ9UD71 204 aaPredicted RBP21.81■■□□□ 1.08
IFT20-211ENST00000580991 MINK1Q8N4C8 1332 aaPredicted RBP21.8■■□□□ 1.08
IFT20-211ENST00000580991 BARGINQ6ZT62 677 aa21.8■■□□□ 1.08
IFT20-211ENST00000580991 SPON1Q9HCB6 807 aa21.8■■□□□ 1.08
IFT20-211ENST00000580991 TRAK1Q9UPV9 953 aa21.8■■□□□ 1.08
IFT20-211ENST00000580991 USP35Q9P2H5 1018 aa21.79■■□□□ 1.08
IFT20-211ENST00000580991 ADGRB1O14514 1584 aa21.78■■□□□ 1.08
IFT20-211ENST00000580991 NINLQ9Y2I6 1382 aa21.77■■□□□ 1.08
IFT20-211ENST00000580991 KCNQ2O43526 872 aa21.76■■□□□ 1.07
IFT20-211ENST00000580991 EVA1CP58658 441 aa21.76■■□□□ 1.07
IFT20-211ENST00000580991 ZC3H6P61129 1189 aaKnown RBP21.76■■□□□ 1.07
IFT20-211ENST00000580991 PHRF1Q9P1Y6 1649 aaKnown RBP21.76■■□□□ 1.07
IFT20-211ENST00000580991 SSH2Q76I76 1423 aa21.75■■□□□ 1.07
IFT20-211ENST00000580991 ATP7BP35670 1465 aa21.74■■□□□ 1.07
IFT20-211ENST00000580991 ITSN1Q15811 1721 aa21.73■■□□□ 1.07
IFT20-211ENST00000580991 TCP11L2Q8N4U5 519 aa21.72■■□□□ 1.07
IFT20-211ENST00000580991 C11orf95C9JLR9 678 aaPredicted RBP21.71■■□□□ 1.07
IFT20-211ENST00000580991 NUTM2GQ5VZR2 741 aa21.7■■□□□ 1.06
IFT20-211ENST00000580991 LARP1Q6PKG0 1096 aaKnown RBP21.7■■□□□ 1.06
IFT20-211ENST00000580991 NUDT16Q96DE0 195 aaKnown RBP21.7■■□□□ 1.06
IFT20-211ENST00000580991 THRAP3Q9Y2W1 955 aaKnown RBP21.7■■□□□ 1.06
IFT20-211ENST00000580991 CAMTA1Q9Y6Y1 1673 aa21.69■■□□□ 1.06
IFT20-211ENST00000580991 CPDO75976 1380 aa21.66■■□□□ 1.06
IFT20-211ENST00000580991 PARP4Q9UKK3 1724 aaKnown RBP21.65■■□□□ 1.06
IFT20-211ENST00000580991 LMO7Q8WWI1 1683 aa21.65■■□□□ 1.06
IFT20-211ENST00000580991 NRKQ7Z2Y5 1582 aa21.65■■□□□ 1.06
IFT20-211ENST00000580991 POLR3AO14802 1390 aaPredicted RBP21.64■■□□□ 1.06
IFT20-211ENST00000580991 PLSCR1O15162 318 aa21.64■■□□□ 1.05
IFT20-211ENST00000580991 RGPD3A6NKT7 1758 aaPredicted RBP21.64■■□□□ 1.05
IFT20-211ENST00000580991 RGPD4Q7Z3J3 1758 aa21.64■■□□□ 1.05
IFT20-211ENST00000580991 ACEP12821 1306 aa21.63■■□□□ 1.05
IFT20-211ENST00000580991 ABTB2Q8N961 1025 aa21.63■■□□□ 1.05
IFT20-211ENST00000580991 OVOS2A0A0G2JMS6 1433 aa21.63■■□□□ 1.05
IFT20-211ENST00000580991 OVOS2A0A0J9YW53 1432 aa21.63■■□□□ 1.05
IFT20-211ENST00000580991 OVOS2Q6IE36 1432 aa21.63■■□□□ 1.05
IFT20-211ENST00000580991 UTRNP46939 3433 aa21.62■■□□□ 1.05
IFT20-211ENST00000580991 KDM2AQ9Y2K7 1162 aa21.62■■□□□ 1.05
IFT20-211ENST00000580991 DCAF11Q8TEB1 546 aa21.61■■□□□ 1.05
IFT20-211ENST00000580991 STAC3Q96MF2 364 aa21.61■■□□□ 1.05
IFT20-211ENST00000580991 CDK19Q9BWU1 502 aa21.61■■□□□ 1.05
IFT20-211ENST00000580991 CCDC61Q9Y6R9 512 aa21.61■■□□□ 1.05
IFT20-211ENST00000580991 ARHGEF28Q8N1W1 1705 aaKnown RBP21.6■■□□□ 1.05
IFT20-211ENST00000580991 USP19O94966 1318 aa21.6■■□□□ 1.05
IFT20-211ENST00000580991 COL5A2P05997 1499 aaPredicted RBP21.59■■□□□ 1.05
IFT20-211ENST00000580991 CASZ1Q86V15 1759 aa21.59■■□□□ 1.05
IFT20-211ENST00000580991 ZNF784Q8NCA9 323 aaPredicted RBP21.59■■□□□ 1.05
IFT20-211ENST00000580991 PEAK1Q9H792 1746 aa21.59■■□□□ 1.05
IFT20-211ENST00000580991 CRB1P82279 1406 aa21.58■■□□□ 1.05
IFT20-211ENST00000580991 SBF2Q86WG5 1849 aa21.58■■□□□ 1.05
IFT20-211ENST00000580991 PLEKHG3A1L390 1219 aa21.58■■□□□ 1.05
IFT20-211ENST00000580991 NLRP13Q86W25 1043 aa21.58■■□□□ 1.05
IFT20-211ENST00000580991 ANO8Q9HCE9 1232 aaPredicted RBP21.58■■□□□ 1.05
IFT20-211ENST00000580991 TOPAZ1Q8N9V7 1692 aa21.58■■□□□ 1.05
IFT20-211ENST00000580991 GCP02774 474 aa21.57■■□□□ 1.04
IFT20-211ENST00000580991 BCL11BQ9C0K0 894 aaPredicted RBP21.56■■□□□ 1.04
IFT20-211ENST00000580991 DDB1Q16531 1140 aa21.55■■□□□ 1.04
IFT20-211ENST00000580991 ZBTB7AO95365 584 aa21.54■■□□□ 1.04
IFT20-211ENST00000580991 PTGER2P43116 358 aa21.54■■□□□ 1.04
IFT20-211ENST00000580991 PDGFDQ9GZP0 370 aaPredicted RBP21.54■■□□□ 1.04
IFT20-211ENST00000580991 LRRC37A3O60309 1634 aa21.53■■□□□ 1.04
IFT20-211ENST00000580991 MYOM1P52179 1685 aa21.53■■□□□ 1.04
IFT20-211ENST00000580991 PROM2Q8N271 834 aa21.51■■□□□ 1.03
IFT20-211ENST00000580991 PTF1AQ7RTS3 328 aa21.5■■□□□ 1.03
IFT20-211ENST00000580991 ATF5Q9Y2D1 282 aaPredicted RBP21.5■■□□□ 1.03
IFT20-211ENST00000580991 CHD4Q14839 1912 aa21.5■■□□□ 1.03
IFT20-211ENST00000580991 AATKQ6ZMQ8 1374 aa21.49■■□□□ 1.03
IFT20-211ENST00000580991 BCL9O00512 1426 aa21.49■■□□□ 1.03
IFT20-211ENST00000580991 SENP3-EIF4A1A0A087X0R7 540 aa21.49■■□□□ 1.03
IFT20-211ENST00000580991 TOM1L2Q6ZVM7 507 aa21.49■■□□□ 1.03
IFT20-211ENST00000580991 SYT17Q9BSW7 474 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms