RNA–Protein interactions for RNA: ENST00000577589.1

CUEDC1-205, Transcript of CUE domain containing 1, humanhuman

TSL 3

Gene CUEDC1, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-205ENST00000577589 ANKRD30BQ9BXX2 1392 aa19.09■□□□□ 0.65
CUEDC1-205ENST00000577589 PHRF1Q9P1Y6 1649 aaKnown RBP19.09■□□□□ 0.65
CUEDC1-205ENST00000577589 NINLQ9Y2I6 1382 aa19.08■□□□□ 0.65
CUEDC1-205ENST00000577589 SIRT1Q96EB6 747 aa19.08■□□□□ 0.64
CUEDC1-205ENST00000577589 SPATA31A1Q5TZJ5 1347 aa19.07■□□□□ 0.64
CUEDC1-205ENST00000577589 PMFBP1Q8TBY8 1022 aa19.07■□□□□ 0.64
CUEDC1-205ENST00000577589 APBA3O96018 575 aa19.05■□□□□ 0.64
CUEDC1-205ENST00000577589 FAM196AQ6ZSG2 479 aa19.05■□□□□ 0.64
CUEDC1-205ENST00000577589 NRKQ7Z2Y5 1582 aa19.05■□□□□ 0.64
CUEDC1-205ENST00000577589 DLC1Q96QB1 1528 aa19.05■□□□□ 0.64
CUEDC1-205ENST00000577589 SLC4A1APQ9BWU0 796 aaKnown RBP19.04■□□□□ 0.64
CUEDC1-205ENST00000577589 PRR36Q9H6K5 1346 aa19.03■□□□□ 0.64
CUEDC1-205ENST00000577589 RGL3Q3MIN7 710 aa19.03■□□□□ 0.64
CUEDC1-205ENST00000577589 MYOM1P52179 1685 aa19.03■□□□□ 0.64
CUEDC1-205ENST00000577589 RGPD3A6NKT7 1758 aaPredicted RBP19.03■□□□□ 0.64
CUEDC1-205ENST00000577589 RGPD4Q7Z3J3 1758 aa19.03■□□□□ 0.64
CUEDC1-205ENST00000577589 PEAK1Q9H792 1746 aa19.02■□□□□ 0.63
CUEDC1-205ENST00000577589 ACIN1Q9UKV3 1341 aaKnown RBP19.01■□□□□ 0.63
CUEDC1-205ENST00000577589 SAFB2Q14151 953 aaKnown RBP eCLIP19.01■□□□□ 0.63
CUEDC1-205ENST00000577589 PRAM1Q96QH2 718 aa19.01■□□□□ 0.63
CUEDC1-205ENST00000577589 SPON1Q9HCB6 807 aa19.01■□□□□ 0.63
CUEDC1-205ENST00000577589 KIAA0232Q92628 1395 aa19.01■□□□□ 0.63
CUEDC1-205ENST00000577589 TULP4Q9NRJ4 1543 aa19■□□□□ 0.63
CUEDC1-205ENST00000577589 KCNQ2O43526 872 aa19■□□□□ 0.63
CUEDC1-205ENST00000577589 ZNF784Q8NCA9 323 aaPredicted RBP19■□□□□ 0.63
CUEDC1-205ENST00000577589 PRDM11Q9NQV5 511 aa19■□□□□ 0.63
CUEDC1-205ENST00000577589 LMO7Q8WWI1 1683 aa19■□□□□ 0.63
CUEDC1-205ENST00000577589 ADGRB1O14514 1584 aa18.99■□□□□ 0.63
CUEDC1-205ENST00000577589 PPARGC1BQ86YN6 1023 aaKnown RBP18.99■□□□□ 0.63
CUEDC1-205ENST00000577589 C14orf93Q9H972 538 aaKnown RBP18.99■□□□□ 0.63
CUEDC1-205ENST00000577589 SBF2Q86WG5 1849 aa18.99■□□□□ 0.63
CUEDC1-205ENST00000577589 PARP4Q9UKK3 1724 aaKnown RBP18.99■□□□□ 0.63
CUEDC1-205ENST00000577589 CHRNA2Q15822 529 aa18.98■□□□□ 0.63
CUEDC1-205ENST00000577589 PPP1R1BQ9UD71 204 aaPredicted RBP18.98■□□□□ 0.63
CUEDC1-205ENST00000577589 SSH2Q76I76 1423 aa18.97■□□□□ 0.63
CUEDC1-205ENST00000577589 GPRASP1Q5JY77 1395 aa18.96■□□□□ 0.63
CUEDC1-205ENST00000577589 CFAP70Q5T0N1 1121 aa18.96■□□□□ 0.63
CUEDC1-205ENST00000577589 CHD4Q14839 1912 aa18.96■□□□□ 0.63
CUEDC1-205ENST00000577589 GOLGB1Q14789 3259 aaKnown RBP18.95■□□□□ 0.62
CUEDC1-205ENST00000577589 PDGFDQ9GZP0 370 aaPredicted RBP18.95■□□□□ 0.62
CUEDC1-205ENST00000577589 ANO8Q9HCE9 1232 aaPredicted RBP18.95■□□□□ 0.62
CUEDC1-205ENST00000577589 DHX57Q6P158 1386 aaKnown RBP18.94■□□□□ 0.62
CUEDC1-205ENST00000577589 NBPF8Q3BBV2 869 aa18.94■□□□□ 0.62
CUEDC1-205ENST00000577589 NBPF14Q5TI25 921 aa18.94■□□□□ 0.62
CUEDC1-205ENST00000577589 BARGINQ6ZT62 677 aa18.94■□□□□ 0.62
CUEDC1-205ENST00000577589 STRN4Q9NRL3 753 aa18.94■□□□□ 0.62
CUEDC1-205ENST00000577589 ITSN1Q15811 1721 aa18.94■□□□□ 0.62
CUEDC1-205ENST00000577589 ATP7BP35670 1465 aa18.92■□□□□ 0.62
CUEDC1-205ENST00000577589 HIRIP3Q9BW71 556 aaPredicted RBP18.92■□□□□ 0.62
CUEDC1-205ENST00000577589 LRRC37A3O60309 1634 aa18.92■□□□□ 0.62
CUEDC1-205ENST00000577589 USP35Q9P2H5 1018 aa18.91■□□□□ 0.62
CUEDC1-205ENST00000577589 TOPAZ1Q8N9V7 1692 aa18.9■□□□□ 0.62
CUEDC1-205ENST00000577589 SENP3-EIF4A1A0A087X0R7 540 aa18.9■□□□□ 0.62
CUEDC1-205ENST00000577589 IFFO2Q5TF58 517 aa18.9■□□□□ 0.62
CUEDC1-205ENST00000577589 PTGER2P43116 358 aa18.89■□□□□ 0.61
CUEDC1-205ENST00000577589 LARP1Q6PKG0 1096 aaKnown RBP18.89■□□□□ 0.61
CUEDC1-205ENST00000577589 PDE3BQ13370 1112 aa18.88■□□□□ 0.61
CUEDC1-205ENST00000577589 MINK1Q8N4C8 1332 aaPredicted RBP18.88■□□□□ 0.61
CUEDC1-205ENST00000577589 WNK3Q9BYP7 1800 aa18.88■□□□□ 0.61
CUEDC1-205ENST00000577589 DCAF8L1A6NGE4 600 aa18.87■□□□□ 0.61
CUEDC1-205ENST00000577589 PAK3O75914 559 aaPredicted RBP18.87■□□□□ 0.61
CUEDC1-205ENST00000577589 ZC3H6P61129 1189 aaKnown RBP18.87■□□□□ 0.61
CUEDC1-205ENST00000577589 EIF3AQ14152 1382 aaKnown RBP18.87■□□□□ 0.61
CUEDC1-205ENST00000577589 PTF1AQ7RTS3 328 aa18.87■□□□□ 0.61
CUEDC1-205ENST00000577589 POGKQ9P215 609 aa18.87■□□□□ 0.61
CUEDC1-205ENST00000577589 ARHGEF28Q8N1W1 1705 aaKnown RBP18.86■□□□□ 0.61
CUEDC1-205ENST00000577589 C1QTNF8P60827 252 aa18.86■□□□□ 0.61
CUEDC1-205ENST00000577589 TCP11L2Q8N4U5 519 aa18.85■□□□□ 0.61
CUEDC1-205ENST00000577589 COL5A2P05997 1499 aaPredicted RBP18.84■□□□□ 0.61
CUEDC1-205ENST00000577589 OVOS2A0A0G2JMS6 1433 aa18.84■□□□□ 0.61
CUEDC1-205ENST00000577589 OVOS2A0A0J9YW53 1432 aa18.84■□□□□ 0.61
CUEDC1-205ENST00000577589 OVOS2Q6IE36 1432 aa18.84■□□□□ 0.61
CUEDC1-205ENST00000577589 WASLO00401 505 aaPredicted RBP18.84■□□□□ 0.61
CUEDC1-205ENST00000577589 NGDNQ8NEJ9 315 aaKnown RBP18.84■□□□□ 0.61
CUEDC1-205ENST00000577589 CPDO75976 1380 aa18.83■□□□□ 0.61
CUEDC1-205ENST00000577589 ZBTB7AO95365 584 aa18.83■□□□□ 0.6
CUEDC1-205ENST00000577589 NUTM2GQ5VZR2 741 aa18.83■□□□□ 0.6
CUEDC1-205ENST00000577589 PROM2Q8N271 834 aa18.82■□□□□ 0.6
CUEDC1-205ENST00000577589 MPHOSPH9Q99550 1183 aa18.82■□□□□ 0.6
CUEDC1-205ENST00000577589 PLSCR1O15162 318 aa18.81■□□□□ 0.6
CUEDC1-205ENST00000577589 TRAK1Q9UPV9 953 aa18.81■□□□□ 0.6
CUEDC1-205ENST00000577589 USP19O94966 1318 aa18.8■□□□□ 0.6
CUEDC1-205ENST00000577589 FHDC1Q9C0D6 1143 aaPredicted RBP18.8■□□□□ 0.6
CUEDC1-205ENST00000577589 POLR3AO14802 1390 aaPredicted RBP18.8■□□□□ 0.6
CUEDC1-205ENST00000577589 AKAP12Q02952 1782 aa18.79■□□□□ 0.6
CUEDC1-205ENST00000577589 SGIP1Q9BQI5 828 aa18.79■□□□□ 0.6
CUEDC1-205ENST00000577589 EVA1CP58658 441 aa18.78■□□□□ 0.6
CUEDC1-205ENST00000577589 SYT17Q9BSW7 474 aa18.78■□□□□ 0.6
CUEDC1-205ENST00000577589 THRAP3Q9Y2W1 955 aaKnown RBP18.78■□□□□ 0.6
CUEDC1-205ENST00000577589 ATF5Q9Y2D1 282 aaPredicted RBP18.77■□□□□ 0.6
CUEDC1-205ENST00000577589 COL18A1P39060 1754 aa18.77■□□□□ 0.6
CUEDC1-205ENST00000577589 PAPPAQ13219 1627 aa18.77■□□□□ 0.6
CUEDC1-205ENST00000577589 SHANK3Q9BYB0 1731 aa18.77■□□□□ 0.59
CUEDC1-205ENST00000577589 CRB1P82279 1406 aa18.76■□□□□ 0.59
CUEDC1-205ENST00000577589 NUDT16Q96DE0 195 aaKnown RBP18.75■□□□□ 0.59
CUEDC1-205ENST00000577589 BCL9O00512 1426 aa18.74■□□□□ 0.59
CUEDC1-205ENST00000577589 BCL11BQ9C0K0 894 aaPredicted RBP18.73■□□□□ 0.59
CUEDC1-205ENST00000577589 MAP3K5Q99683 1374 aa18.72■□□□□ 0.59
CUEDC1-205ENST00000577589 ACEP12821 1306 aa18.72■□□□□ 0.59
CUEDC1-205ENST00000577589 C11orf95C9JLR9 678 aaPredicted RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms