RNA–Protein interactions for RNA: ENST00000558904.2

RORA-208, Transcript of RAR related orphan receptor A, humanhuman

TSL 2

Gene RORA, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-208ENST00000558904 SPON1Q9HCB6 807 aa13.19□□□□□ -0.3
RORA-208ENST00000558904 TRIM37O94972 964 aa13.18□□□□□ -0.3
RORA-208ENST00000558904 YTHDC2Q9H6S0 1430 aaKnown RBP13.18□□□□□ -0.3
RORA-208ENST00000558904 ADGRB2O60241 1585 aa13.18□□□□□ -0.3
RORA-208ENST00000558904 KNDC1Q76NI1 1749 aa13.18□□□□□ -0.3
RORA-208ENST00000558904 GPRASP1Q5JY77 1395 aa13.18□□□□□ -0.3
RORA-208ENST00000558904 DHX57Q6P158 1386 aaKnown RBP13.18□□□□□ -0.3
RORA-208ENST00000558904 PMFBP1Q8TBY8 1022 aa13.17□□□□□ -0.3
RORA-208ENST00000558904 COL14A1Q05707 1796 aaKnown RBP13.17□□□□□ -0.3
RORA-208ENST00000558904 C11orf95C9JLR9 678 aaPredicted RBP13.16□□□□□ -0.3
RORA-208ENST00000558904 KCNQ2O43526 872 aa13.16□□□□□ -0.3
RORA-208ENST00000558904 DSG3P32926 999 aa13.16□□□□□ -0.3
RORA-208ENST00000558904 PDE3BQ13370 1112 aa13.16□□□□□ -0.3
RORA-208ENST00000558904 PRDM11Q9NQV5 511 aa13.16□□□□□ -0.3
RORA-208ENST00000558904 C14orf93Q9H972 538 aaKnown RBP13.15□□□□□ -0.3
RORA-208ENST00000558904 NINLQ9Y2I6 1382 aa13.15□□□□□ -0.3
RORA-208ENST00000558904 SPATA31A1Q5TZJ5 1347 aa13.14□□□□□ -0.31
RORA-208ENST00000558904 ANKARQ7Z5J8 1434 aa13.14□□□□□ -0.31
RORA-208ENST00000558904 NRAPQ86VF7 1730 aa13.14□□□□□ -0.31
RORA-208ENST00000558904 POGKQ9P215 609 aa13.14□□□□□ -0.31
RORA-208ENST00000558904 RGPD8O14715 1765 aaPredicted RBP13.14□□□□□ -0.31
RORA-208ENST00000558904 ABCA3Q99758 1704 aa13.13□□□□□ -0.31
RORA-208ENST00000558904 EIF3AQ14152 1382 aaKnown RBP13.13□□□□□ -0.31
RORA-208ENST00000558904 PRAM1Q96QH2 718 aa13.13□□□□□ -0.31
RORA-208ENST00000558904 U3KPZ7 1027 aaPredicted RBP13.13□□□□□ -0.31
RORA-208ENST00000558904 TNS1Q9HBL0 1735 aaKnown RBP13.13□□□□□ -0.31
RORA-208ENST00000558904 PIK3C2GO75747 1445 aa13.13□□□□□ -0.31
RORA-208ENST00000558904 SPINK5Q9NQ38 1064 aaPredicted RBP13.12□□□□□ -0.31
RORA-208ENST00000558904 IFT172Q9UG01 1749 aa13.11□□□□□ -0.31
RORA-208ENST00000558904 NPM3O75607 178 aaKnown RBP13.11□□□□□ -0.31
RORA-208ENST00000558904 PAK3O75914 559 aaPredicted RBP13.11□□□□□ -0.31
RORA-208ENST00000558904 EVA1CP58658 441 aa13.11□□□□□ -0.31
RORA-208ENST00000558904 NCBP3Q53F19 620 aaKnown RBP13.11□□□□□ -0.31
RORA-208ENST00000558904 BARGINQ6ZT62 677 aa13.11□□□□□ -0.31
RORA-208ENST00000558904 NGDNQ8NEJ9 315 aaKnown RBP13.11□□□□□ -0.31
RORA-208ENST00000558904 SPATA31E1Q6ZUB1 1445 aa13.11□□□□□ -0.31
RORA-208ENST00000558904 THSD7AQ9UPZ6 1657 aa13.11□□□□□ -0.31
RORA-208ENST00000558904 ACIN1Q9UKV3 1341 aaKnown RBP13.11□□□□□ -0.31
RORA-208ENST00000558904 SAFB2Q14151 953 aaKnown RBP eCLIP13.1□□□□□ -0.31
RORA-208ENST00000558904 STRN4Q9NRL3 753 aa13.1□□□□□ -0.31
RORA-208ENST00000558904 CFAP70Q5T0N1 1121 aa13.08□□□□□ -0.32
RORA-208ENST00000558904 THRAP3Q9Y2W1 955 aaKnown RBP13.08□□□□□ -0.32
RORA-208ENST00000558904 USP35Q9P2H5 1018 aa13.07□□□□□ -0.32
RORA-208ENST00000558904 ALS2Q96Q42 1657 aa13.06□□□□□ -0.32
RORA-208ENST00000558904 TRPM3Q9HCF6 1732 aaPredicted RBP13.06□□□□□ -0.32
RORA-208ENST00000558904 PLSCR1O15162 318 aa13.06□□□□□ -0.32
RORA-208ENST00000558904 TCP11L2Q8N4U5 519 aa13.06□□□□□ -0.32
RORA-208ENST00000558904 KIAA0232Q92628 1395 aa13.06□□□□□ -0.32
RORA-208ENST00000558904 RREB1Q92766 1687 aa13.05□□□□□ -0.32
RORA-208ENST00000558904 DLC1Q96QB1 1528 aa13.05□□□□□ -0.32
RORA-208ENST00000558904 WASLO00401 505 aaPredicted RBP13.05□□□□□ -0.32
RORA-208ENST00000558904 CHRNA2Q15822 529 aa13.05□□□□□ -0.32
RORA-208ENST00000558904 ZNF784Q8NCA9 323 aaPredicted RBP13.05□□□□□ -0.32
RORA-208ENST00000558904 MPHOSPH9Q99550 1183 aa13.05□□□□□ -0.32
RORA-208ENST00000558904 SENP3-EIF4A1A0A087X0R7 540 aa13.04□□□□□ -0.32
RORA-208ENST00000558904 PPARGC1BQ86YN6 1023 aaKnown RBP13.04□□□□□ -0.32
RORA-208ENST00000558904 ZC3H6P61129 1189 aaKnown RBP13.03□□□□□ -0.32
RORA-208ENST00000558904 IFFO2Q5TF58 517 aa13.03□□□□□ -0.32
RORA-208ENST00000558904 HIRIP3Q9BW71 556 aaPredicted RBP13.03□□□□□ -0.32
RORA-208ENST00000558904 NUP188Q5SRE5 1749 aa13.02□□□□□ -0.32
RORA-208ENST00000558904 C1QTNF8P60827 252 aa13.02□□□□□ -0.33
RORA-208ENST00000558904 TRAK1Q9UPV9 953 aa13.01□□□□□ -0.33
RORA-208ENST00000558904 MINK1Q8N4C8 1332 aaPredicted RBP13.01□□□□□ -0.33
RORA-208ENST00000558904 PRR36Q9H6K5 1346 aa13.01□□□□□ -0.33
RORA-208ENST00000558904 SSH2Q76I76 1423 aa13.01□□□□□ -0.33
RORA-208ENST00000558904 TULP4Q9NRJ4 1543 aa13.01□□□□□ -0.33
RORA-208ENST00000558904 LARP1Q6PKG0 1096 aaKnown RBP13□□□□□ -0.33
RORA-208ENST00000558904 ATP7BP35670 1465 aa12.99□□□□□ -0.33
RORA-208ENST00000558904 NUDT16Q96DE0 195 aaKnown RBP12.99□□□□□ -0.33
RORA-208ENST00000558904 STAC3Q96MF2 364 aa12.99□□□□□ -0.33
RORA-208ENST00000558904 BCL11BQ9C0K0 894 aaPredicted RBP12.99□□□□□ -0.33
RORA-208ENST00000558904 CRYBG1Q9Y4K1 1723 aa12.99□□□□□ -0.33
RORA-208ENST00000558904 CPDO75976 1380 aa12.98□□□□□ -0.33
RORA-208ENST00000558904 CAPN15O75808 1086 aa12.98□□□□□ -0.33
RORA-208ENST00000558904 OVOS2A0A0G2JMS6 1433 aa12.97□□□□□ -0.33
RORA-208ENST00000558904 OVOS2A0A0J9YW53 1432 aa12.97□□□□□ -0.33
RORA-208ENST00000558904 OVOS2Q6IE36 1432 aa12.97□□□□□ -0.33
RORA-208ENST00000558904 NLRP13Q86W25 1043 aa12.97□□□□□ -0.33
RORA-208ENST00000558904 ABTB2Q8N961 1025 aa12.97□□□□□ -0.33
RORA-208ENST00000558904 SYT17Q9BSW7 474 aa12.97□□□□□ -0.33
RORA-208ENST00000558904 ZBTB7AO95365 584 aa12.96□□□□□ -0.33
RORA-208ENST00000558904 DDB1Q16531 1140 aa12.96□□□□□ -0.33
RORA-208ENST00000558904 NUTM2GQ5VZR2 741 aa12.96□□□□□ -0.33
RORA-208ENST00000558904 STK32BQ9NY57 414 aa12.96□□□□□ -0.33
RORA-208ENST00000558904 RGPD3A6NKT7 1758 aaPredicted RBP12.95□□□□□ -0.34
RORA-208ENST00000558904 RGPD4Q7Z3J3 1758 aa12.95□□□□□ -0.34
RORA-208ENST00000558904 PTGER2P43116 358 aa12.95□□□□□ -0.34
RORA-208ENST00000558904 CDCA7Q9BWT1 371 aaPredicted RBP12.95□□□□□ -0.34
RORA-208ENST00000558904 MTFR1LQ9H019 292 aa12.95□□□□□ -0.34
RORA-208ENST00000558904 ATF5Q9Y2D1 282 aaPredicted RBP12.95□□□□□ -0.34
RORA-208ENST00000558904 CCDC61Q9Y6R9 512 aa12.95□□□□□ -0.34
RORA-208ENST00000558904 CHD4Q14839 1912 aa12.94□□□□□ -0.34
RORA-208ENST00000558904 CAMTA1Q9Y6Y1 1673 aa12.94□□□□□ -0.34
RORA-208ENST00000558904 GCP02774 474 aa12.94□□□□□ -0.34
RORA-208ENST00000558904 FHDC1Q9C0D6 1143 aaPredicted RBP12.94□□□□□ -0.34
RORA-208ENST00000558904 ITSN1Q15811 1721 aa12.93□□□□□ -0.34
RORA-208ENST00000558904 ACEP12821 1306 aa12.93□□□□□ -0.34
RORA-208ENST00000558904 PHRF1Q9P1Y6 1649 aaKnown RBP12.93□□□□□ -0.34
RORA-208ENST00000558904 PLEKHG3A1L390 1219 aa12.93□□□□□ -0.34
RORA-208ENST00000558904 SLC15A2Q16348 729 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms